Pful017211.1
Basic Information
- Insect
- Phragmatobia fuliginosa
- Gene Symbol
- -
- Assembly
- GCA_932526455.1
- Location
- CAKOBD010000095.1:1898948-1899466[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-10 1.1e-07 32.2 0.0 2 40 10 48 9 52 0.92 2 2 8.4 8.1e+03 -2.6 0.0 17 23 129 135 128 135 0.83
Sequence Information
- Coding Sequence
- ATGCCTCCTAAGCGAGCATTGTGGTCACAAGATGACCTGGTCTCAGCTGTTCGCGCAGTACAGAGAGGAATAATGAGTTCGTGTGCGGCTGCAGAAAGATACAAAGTTCCTAGAAGAACCATCAGAAACCATCTCCAGAGTGGTATTTTGCTAAAAAGTTTAGGTCGTAAGCCTGTATTGAATCCCGAACAGGAAGCTGATCTTGTGAATCTTGTGAAGAGGATAATCAGGTATGCAGAAATAAGTTTACCTGTCACTCCAAGAATACTGCGACGGTTGGTGTACAAATATTGCGTGCTAAACAACATAAAGCACAATTTTGATGAGACTGCGAAACGCGCTGGTAAAGACTGGTATAAGGCCTTTATGAAGAGACATCCTGAAATATCTCTAAGAAAAGCACAGTTCATGAACGTGGCCAGAGCCCAAAAACTTAATAAATTTAATGTGGGTGACCACTTTGACAGACTGAAAAAAGTTTACGATGAATTGGAACTTAGAGATCACCCCGAAAGATAA
- Protein Sequence
- MPPKRALWSQDDLVSAVRAVQRGIMSSCAAAERYKVPRRTIRNHLQSGILLKSLGRKPVLNPEQEADLVNLVKRIIRYAEISLPVTPRILRRLVYKYCVLNNIKHNFDETAKRAGKDWYKAFMKRHPEISLRKAQFMNVARAQKLNKFNVGDHFDRLKKVYDELELRDHPER
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00394265;
- 90% Identity
- iTF_00394265;
- 80% Identity
- -