Basic Information

Gene Symbol
Arid2
Assembly
GCA_932526455.1
Location
CAKOBD010000053.1:1675767-1710700[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.5e-20 1.3e-16 61.4 0.0 2 89 17 101 16 101 0.93

Sequence Information

Coding Sequence
ATGGCAAAAGCACAAATAAATACGAAATCTAGCAACTATGTGAAAGACAGAGACGCTTTCCTTAAGGATCTGAAGCAATTTAACGAGAGTAAAAATTTACCGACCAAGCCACCAATAGTTAATGGAATAGAAATAGATCTTTACTTATTTTATATGTTAGTACAACAACGAGGAGGACTTGGAAAGGTAAATCAAAACGACACTTGGGAATCATTTCTGCGACCATTAAGATTGCCACATCCATGTATTAATGGATCAACGTTGCTCAGAAGAATATATGGATCACATTTAGAAAAATATGAACGCGCTAAAGGCCCTCCCGGTCGAGACGACGACAATGACATGGATGAAGACCCTCGCAGAGGTCGTGGTGGTGCCATGCCACGCATATCTTATGGTGGGGGTACGTACATATCAGCTTCAGGTGAGCAACTCCGCACTGGGTCTCGGGTCGCGGCTGCGTCAGAACGTCTCGCGCTGTCTCTGCTGTCCCCGATGCCCAACGAGCAAGACTTCGCCGTCAACGTGTGCACTGTACTGGCTGCGGACCATTCGAATAGACTTCCCTTGAGTACTACGCCTCATATATTGGATTTTCTGCTGGCACATGCAGGAGTATATAACCATTCGAGTCTTCGAGACACAATCGGCCGCTCGTACTACGAAGCTCGAGGTCTTTACCCAGACGACTTTTGGCGAATGCGAGCCGGTGGTGGAGGCGCAAAGGAACTCGCCGATGAGACCAAGTTTATGCAGCCCGGCGTCGAACAACCCGACCTCATAGTCCAAGCCAGAGCAGCTCATAACACCCTCACTGACTGTCTGATGAATGATCCCGATGAAGAAGACTTGGTTGAGAAGATCATTGAAGATGAGGTATTAGAAGACTGGGTTACAGAACCTTCGGACGATCACCAGCTGTTTGCTCCGGAGCTCCCCGGAGGTGCTTCCTGCGTGTACACCCAGAGAGTTTTACAGATAGCTTCTATAGTACGGTCACTGTCGTTTCATGAGGAGAATGTCCAATATCTCTCTAAGAACACCACTTTGATCAGATTTTTACTACTATGTGCAAACAGTTGGGTCGGCACATTGCGACAATCGGGGCTAGACACGCTTGGTAATGTGTCCACGGAGCTAATTATTAAGGACCCAGCTACGTGTTTGATATCTCGTCACATACTGTCTACAATTCAGTCGGCGTTGGTGTCTCAAGATCGAGCGCGCGTGCTTGCCGCGCTCGAGCTACTCAACAAACTGGCTCAAAATGAGGTCAACGAAGATGCTTTACTCAAATCATTAGAAGCTAAGGTATACCATGACGTGTGCAGTCTGCTGACGCTGCGCGATATAATGGTGTTGGTGTGTACGCTGGAGTGCGTGTACGCGCTCACGTCGTTGGGAGACCGCGCGAGCGAAGCCGTGGCGAGGGTGCCTGGGCTTATACACACTCTCGTCTCATTGGTCACTGTTGAGGCGCAGAGCTACGGTCCCCGCGCTTGTATCCTGATGCGAGTGGTGGAGACGGTGAGCGGCCCCAGCGCAGTCGCAGCTCACGCTGAGAGGGACGCGCAGGAGCGGACCCAACCACACCCACCACAGACTCAAACAACTCCTGTGAAACAAGCGCCAGAGGTGACACAAGGGCCAGCCACTACCACCACGACGGCCACTTCGTCTGTCTCTTCCTTAGCACCTGTATCTTCTATACAACAGTCACATATTCAACAAAGAACTGTGCAAGAAAACGAACACTTTGCCCAAGTATGGCTACGATCAGCGTACGAAGTCCTCCCAGCGAACGACAACAGCGCGTGTGACGCGAGCGAGGTGTACCGCCAGTACCTGGCGTGCTGCACCAAGCTGTCGCGGAAGGGAGTCATCGCTCCTGCACACTTCCCCCGCCTCGTCAGGACGGTATTCGGAGGTACAGTGGGGCCTAACACGTTGAACCTGGCAAATGGGGAGTCACAACAGGTGTATATTGGGATCAGGGCGAGGAATGTTCAGAACAGAACTGCTCCTGCGGCGGGACCTTCATCACCGATACTGAAAGCGCAGTTGACAAGCAAACCACCAGCAACAGAAACTAAGCCCGTCGTCACACAGCAGCCTCAAGTTCAGCAATCACAACAACAGCCAACAACAACGCACCCACATTTATCCCAAGCGTTAGAGTCGAATCCTTCGAACACCACGTTAATAAAACACTTGTTAGCCCATAAAGTAAGCCCCGCAGTACCACAAACGCAAGTAGCACAAAGGCAGCAAAGTCAACAGAGAGTTCCAGCCACTCCGAACACTGTGGTAATACAACAACCAACTCAGGTGCAGTCTATGGATGTTGATCCGGAAGCTCTAATCAAGTGTACAACAATAACGCCCGGCGGTGTTGCCAGTAGCAGTCAAGCTGCGCCGCAAGAAAAGGGTAATTTCAACTCTTCCGAAGACTTGATAGTGCCTAAAGAAGAACCAGTACAGATACAATTAGACGAACAGGCACAATTTACTATCAAAACAGCTCAAAATAAAATGTTAGCAGACCTACTCAAAAAGAATTCCAACCCACCACTTCAAGTGGTACAGATGGGACCTCAAATCAATGCTCCTACAATTCAAATCACTGAAACGGGTCAAATCGTTCAAGTCAAATCAGACCCGACTCCAGTCATTCAATTCAACCCGGACGCTGGCATAGTATCCCAAGGAAGCCAGTATTTCCAAATCAAGAATGAACAAGGGCAACTCATTCAAATAAAGAACGAACAAGGTCAAATCATTCACCTCAAGAGTGATCAACTAGCGCCACCTATGCTTCAGTTTAAAAATGAACAAGGACAGGTAGTACAGGTGAAGAATGAAAAGGAAGTAGCTGAAACTGTGGTCAGTGATCATGCTTATACGGAACCTCCAACCAAGAAGATCAAAGTTGAAGACAAAAAAGAGAGCATCCCGCCTCAAGAAAGCGTATCTAAAACAGCCGCAAACTTATATGCAGCACTCGCAGCATCAGCTTTGGAAGACGAGGACGACTTGCGGCCACGTGGACTGCGGATCGCTGCCCTACGTGCTAAGATGCCGCCAAAGCAAGAACCAGTAGATACGATGCAGTCCTCTATGCTTGTAGCAGCGACAGGGGACAACCCATCTTTTATACAAGAACCTATTCTACAAGTTCAGCAACCAGCTATGTCCGTACAACAACCGACTTTGCAAGTACAACAACCAACACTGCAAGTGCAACAACCCACTTTGCAAGTGCAGGGCAACACGATACAGGTGCAACAACCGACGCTGCAAGTGCAGCAACCGATGCTTCAAGTGCAACCGATGGACGTTCAGAATCTAATAGCATCTCAATCAGGACAAATTATTTTGCAAGAGAAAACAATAGGTTCCCAACCAACAACGCAATACGTTCAACAACCCATGCAGATTATCGCGACGCCTAGCACTTCCCAAGGAGGATTGAGCTACCTAGCACAGAACATACCTGGTGGCATGATGCAGAAAACTATAATTATCGTGCAAGGCCCTACTGGCGGTGGACCTCTGACTCTAACGGTGAACAACCCAGGAGGTTTGGACGACGCGACCCTAAACAGTCTTATCACCCAGGCTACAGAGGCGATAACCCAACAGCAAATTATACAGAACTCTGGCGTGATACAGTCGACACAGAGAATGCTCCCGCCACTGGTGAGCACGTCCCACTGTGGACAGAGCATCACAGTGGTCAAAACATCAATAGCTCAGAACACCCCCCAAATAACTCCAAGCCAGCAACCTATAATAACAACACAGCCGCAACCACACAAGGCCCAGCTCGTCAACCCGCAACCATCTCAGATAGTGGTTGCAACACAGAAGCAACCCCCAGCGCTAATAAGCACTTCAATGACGTCATCAACTAATCAGATAGTGACGAGCAACCCACAGTTGATTCAAGGCAACCAGCAACTATTACAAGGGAGTCAGCAGATAATTACAGTTTCTAACAATCAGCCGGTGATAGTGAACGCGCCGATGAAGTCTAACGTGCACAGGGTCGTTCAGAACGTGCAACAACCGCAGAGGAGCCCCGTTGTTAGTAACGTGCAAACCATCAACCCCGTGTCCGTTGTGCAAGCAGAAGGAAAGACTAGTGTTATACAGTCTAGTGCGAAAATCTCGCAACAGCCGGTAATGAGGCAAGTGATTACTCGGCAGCCCGTCATGGTCGGCAACACAAAGATTGGTGATAAGGAACTCGTCGTTTCACAAACTGTCTCTGAGCCACCAAAGCCAGCCACACCTAAACCCGCAGCAACACCCCCGCCCGCGCCGATCCCTCAGCCAGCTCAACAAACCACCCCTCCGTTAGATGAAACACCCTGGATTTGTCACTGGAGGGGATGTGGAAAATCGTTCGTGAATTCGACGGAGGTGTTTACGCACGCGGCCCGCACGCACTGCCCGGTGACGTCGGGCGGCGAGGCGCCGTGCCTGTGGCTGGACTGCGACAGGGTGCCGCGCAAGACCTTCGCGCTGCTCAACCACCTCACCGACAAGCACTGCACACCGCATGCGTTAAAAGCGATCTACAACTCTCGTCGTTTGGCTGCGAGTGAGGTTGAGAGTAAGCCCGTGTCGCTGGGCTACCCGCCCAACGCCGCACTGGCCGCTCTCAACAAACACGCCAACGACATGTACAACCCAAGGGAACTCATGGATGAGAACGAGGGTCCAGTTACGAAGAGTATCCGATTGACGGCTGCACTTATATTGAGGAATATTGTCATCTATTCTAACACTGGACGAAGGCAACTACGTTCCTACGAGGCAAATCTCGCCACAATCGCGTTGAGTAGTGTCGAAGCTTCTAGAACCATCGCACAAGTTCTGTATGACATGAACAACATCTGA
Protein Sequence
MAKAQINTKSSNYVKDRDAFLKDLKQFNESKNLPTKPPIVNGIEIDLYLFYMLVQQRGGLGKVNQNDTWESFLRPLRLPHPCINGSTLLRRIYGSHLEKYERAKGPPGRDDDNDMDEDPRRGRGGAMPRISYGGGTYISASGEQLRTGSRVAAASERLALSLLSPMPNEQDFAVNVCTVLAADHSNRLPLSTTPHILDFLLAHAGVYNHSSLRDTIGRSYYEARGLYPDDFWRMRAGGGGAKELADETKFMQPGVEQPDLIVQARAAHNTLTDCLMNDPDEEDLVEKIIEDEVLEDWVTEPSDDHQLFAPELPGGASCVYTQRVLQIASIVRSLSFHEENVQYLSKNTTLIRFLLLCANSWVGTLRQSGLDTLGNVSTELIIKDPATCLISRHILSTIQSALVSQDRARVLAALELLNKLAQNEVNEDALLKSLEAKVYHDVCSLLTLRDIMVLVCTLECVYALTSLGDRASEAVARVPGLIHTLVSLVTVEAQSYGPRACILMRVVETVSGPSAVAAHAERDAQERTQPHPPQTQTTPVKQAPEVTQGPATTTTTATSSVSSLAPVSSIQQSHIQQRTVQENEHFAQVWLRSAYEVLPANDNSACDASEVYRQYLACCTKLSRKGVIAPAHFPRLVRTVFGGTVGPNTLNLANGESQQVYIGIRARNVQNRTAPAAGPSSPILKAQLTSKPPATETKPVVTQQPQVQQSQQQPTTTHPHLSQALESNPSNTTLIKHLLAHKVSPAVPQTQVAQRQQSQQRVPATPNTVVIQQPTQVQSMDVDPEALIKCTTITPGGVASSSQAAPQEKGNFNSSEDLIVPKEEPVQIQLDEQAQFTIKTAQNKMLADLLKKNSNPPLQVVQMGPQINAPTIQITETGQIVQVKSDPTPVIQFNPDAGIVSQGSQYFQIKNEQGQLIQIKNEQGQIIHLKSDQLAPPMLQFKNEQGQVVQVKNEKEVAETVVSDHAYTEPPTKKIKVEDKKESIPPQESVSKTAANLYAALAASALEDEDDLRPRGLRIAALRAKMPPKQEPVDTMQSSMLVAATGDNPSFIQEPILQVQQPAMSVQQPTLQVQQPTLQVQQPTLQVQGNTIQVQQPTLQVQQPMLQVQPMDVQNLIASQSGQIILQEKTIGSQPTTQYVQQPMQIIATPSTSQGGLSYLAQNIPGGMMQKTIIIVQGPTGGGPLTLTVNNPGGLDDATLNSLITQATEAITQQQIIQNSGVIQSTQRMLPPLVSTSHCGQSITVVKTSIAQNTPQITPSQQPIITTQPQPHKAQLVNPQPSQIVVATQKQPPALISTSMTSSTNQIVTSNPQLIQGNQQLLQGSQQIITVSNNQPVIVNAPMKSNVHRVVQNVQQPQRSPVVSNVQTINPVSVVQAEGKTSVIQSSAKISQQPVMRQVITRQPVMVGNTKIGDKELVVSQTVSEPPKPATPKPAATPPPAPIPQPAQQTTPPLDETPWICHWRGCGKSFVNSTEVFTHAARTHCPVTSGGEAPCLWLDCDRVPRKTFALLNHLTDKHCTPHALKAIYNSRRLAASEVESKPVSLGYPPNAALAALNKHANDMYNPRELMDENEGPVTKSIRLTAALILRNIVIYSNTGRRQLRSYEANLATIALSSVEASRTIAQVLYDMNNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00017962;
90% Identity
iTF_00822671;
80% Identity
-