Patr011398.1
Basic Information
- Insect
- Phosphuga atrata
- Gene Symbol
- pnr
- Assembly
- GCA_944567605.1
- Location
- CALYMX010000169.1:824427-834135[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.3e-18 2.9e-14 55.2 3.2 1 34 56 88 56 90 0.97 2 3 0.65 1.5e+04 -1.5 0.0 1 8 159 166 159 170 0.74 3 3 1.1 2.6e+04 -2.2 0.0 24 32 174 182 164 184 0.73
Sequence Information
- Coding Sequence
- ATGATAAGTCGGCACTGGATATGTCGGCACCGGACGACTCGGCACTTCCAACTCGGCACCGGACAAGTCGGCACCGGACAAGTCGGCACCAGGAAAACTCGGCACCGGATAAGCCGGCACCGGATAAATGGTGCCGTAGAGTTTCAATTTGGTGAAGGAAGAGAGTGCGTCAACTGCGGCGCCATTTCTACGCCGCTATGGCGTCGCGACGGCACGGGACATTACTTGTGCAACGCCTGCGGACTTTATCACAAAATGAACGGCATGAATCGGCCCCTAATCAAACCCTCCAAACGACTGTTTTGTATAGTAATATCCATACTGTGCAGTAAAATTAAAAGTTTAAACCAGAAAAGAACAAAAGCTTGCCTGAAACTAAACAGGAACAAGCTTAGAATTCTGACAGGAGTCCTGACGGAACACTGCAGACTTAGAAAACACCTCAAGGCTCTAGGCCTAGAGGAGGATGACAGATGCAGATTCTGTGGTTCAGCAGAGGAAACCCCCATACATCTGCTCAAAGACTGCGGAGCTTTCCTCCGCAATAGACATATGTATCATGTAGCCCACTGCTTCAACGCACAGGAGTTGCAGTCCTTGAATCCCATTCAGATCCCGCAATTCCTAAGAGAATCAGGACTAGAGGAGGCGCTCTAA
- Protein Sequence
- MISRHWICRHRTTRHFQLGTGQVGTGQVGTRKTRHRISRHRINGAVEFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLFCIVISILCSKIKSLNQKRTKACLKLNRNKLRILTGVLTEHCRLRKHLKALGLEEDDRCRFCGSAEETPIHLLKDCGAFLRNRHMYHVAHCFNAQELQSLNPIQIPQFLRESGLEEAL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -