Patr011397.1
Basic Information
- Insect
- Phosphuga atrata
- Gene Symbol
- pnr
- Assembly
- GCA_944567605.1
- Location
- CALYMX010000169.1:817976-821248[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6 6e+04 -3.4 0.3 12 18 13 19 11 23 0.56 2 2 8.2e-20 1.9e-15 59.0 5.8 1 35 24 57 24 58 0.98
Sequence Information
- Coding Sequence
- ATGTATGTGAAAAGAAAGAGAGACAAGAGGTTGAGATGGAGAACTGCGACTCGAAGATTAGGGCTTTGTTGCACAAACTGCGGGACTCGTACAACGACCTTATGGCGAAGGAACAACGACGGCGAACCAGTCTGCAACGCTTGCGGCCTATACTTCAAGCTGCACGGAGTGAACAGACCTCTCGCAATGCGCAAGGACGGAATCCAAACACGCAAACGCAAGCCCAAGAAGCCAAATGGTGGAGAGAACGACGGCAGCACGCCTTCGTCAGCCGACGAATCGAAACCGGGTTTGATCCATCCCCACAACAACCAACCACCGCAAACTTCATCAACACATAATCACACCTCCACTCATGCAATCGATTCTTCTCCTAATAAACCGGCAGATCGTCCATATTTGGGACAAACCTCGTTGCTTCCAGCCACTAGTACATCAAGCGGAAGCGTCATCAAAAGCGAACCGTACGAGCCGTACAGTTGCTTCCAGAACCAATCCTATCCCTATCAACAATTCTTTGGATTCCCAGGTGCTGCGACATCTACACCAGAAGTCGCCTACCATCACCAGCATCACGTCACGGCAGCCGCCAAGCTCATGGCATCGTCGTGA
- Protein Sequence
- MYVKRKRDKRLRWRTATRRLGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKPNGGENDGSTPSSADESKPGLIHPHNNQPPQTSSTHNHTSTHAIDSSPNKPADRPYLGQTSLLPATSTSSGSVIKSEPYEPYSCFQNQSYPYQQFFGFPGAATSTPEVAYHHQHHVTAAAKLMASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01185850;
- 90% Identity
- -
- 80% Identity
- -