Basic Information

Insect: Phosphuga atrata
Gene Symbol: -
Assembly: GCA_944567605.1
Location: CALYMX010000344.1:447946-471084[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0048 1.5 12.2 0.4 1 23 133 156 133 156 0.96

2 15 6.9 2.2e+03 2.3 0.1 3 23 161 182 160 182 0.91

3 15 0.0026 0.83 13.0 0.2 2 23 339 361 338 361 0.92

4 15 0.007 2.2 11.7 2.4 2 20 616 634 615 634 0.94

5 15 9.9e-05 0.032 17.5 0.7 1 23 651 674 651 674 0.91

6 15 0.0015 0.47 13.8 0.7 1 21 715 735 715 736 0.94

7 15 0.16 51 7.4 3.8 1 23 742 765 742 765 0.80

8 15 7.8e-06 0.0025 21.0 3.6 1 23 771 793 771 793 0.98

9 15 6.2e-05 0.02 18.1 0.6 2 23 799 820 798 820 0.96

10 15 4.2e-07 0.00013 25.0 5.8 1 23 825 847 825 847 0.98

11 15 0.0013 0.43 14.0 2.6 1 23 853 875 853 875 0.96

12 15 8.1e-05 0.026 17.8 5.5 2 23 882 903 881 903 0.96

13 15 3.7e-05 0.012 18.9 1.3 2 23 910 931 909 931 0.96

14 15 0.0067 2.1 11.7 0.6 5 23 940 959 939 959 0.94

15 15 4 1.3e+03 3.0 1.7 1 23 986 1009 986 1009 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0048	1.5	12.2	0.4	1	23	133	156	133	156	0.96
2	15	6.9	2.2e+03	2.3	0.1	3	23	161	182	160	182	0.91
3	15	0.0026	0.83	13.0	0.2	2	23	339	361	338	361	0.92
4	15	0.007	2.2	11.7	2.4	2	20	616	634	615	634	0.94
5	15	9.9e-05	0.032	17.5	0.7	1	23	651	674	651	674	0.91
6	15	0.0015	0.47	13.8	0.7	1	21	715	735	715	736	0.94
7	15	0.16	51	7.4	3.8	1	23	742	765	742	765	0.80
8	15	7.8e-06	0.0025	21.0	3.6	1	23	771	793	771	793	0.98
9	15	6.2e-05	0.02	18.1	0.6	2	23	799	820	798	820	0.96
10	15	4.2e-07	0.00013	25.0	5.8	1	23	825	847	825	847	0.98
11	15	0.0013	0.43	14.0	2.6	1	23	853	875	853	875	0.96
12	15	8.1e-05	0.026	17.8	5.5	2	23	882	903	881	903	0.96
13	15	3.7e-05	0.012	18.9	1.3	2	23	910	931	909	931	0.96
14	15	0.0067	2.1	11.7	0.6	5	23	940	959	939	959	0.94
15	15	4	1.3e+03	3.0	1.7	1	23	986	1009	986	1009	0.97

Sequence Information

Coding Sequence: ATGGACAAATGGTTAATAAATTCCAAGAGGAAACTAACAGATAACTCTGACACTCCTAGTAGCAGCAGTACCAAGCGACGCCCCCAAGAAGTTTCTGAAAAATTAAAACAGAAAAAAAGGATATACAACGACGAGTATTTGGCAACAGACAATACATCACCTTTACCTGCAATCCAGCGTACATCCACGTCTATAAACACCAAGAAGAAAGGCAAACCGGTGAAACGTTTCACCAGCAGCTCGATAAAACCCCGCAAAAGAATCCGTAGCGTGTCCCCATCATCCTCCAAATATTCCCTCAGCGACGTCACCATAATCCAACGCACCCACGGCTTAGTAAAAGACGAACAAGCCTTACAAAACTCTCTTAACGTAAGCACGTGCAATGGCCCCAATTTCAATTGCTCCTACTGCGGCATTAATTTCTACTCCGGGATGAAACTCAAGATCCATCTGTTAATGGAACATATGGTCGAGAATTGTATGATTTGCGATTTGTTATTTGCAAACGCAGAGCAGAGAGCCGAACACGAGAGTAAAGTTCATGGTGCGAATATTTGCGAGATCTGCCATGGAAACTTTGACGAAATCGTGGAACATTACAAGAACGGACACGACGCTGTTATTTGCAATTATTGTAACATACTCTTACACCCTTCCGAACATTATTTCAAGCATGTTATTGAACATCACTGCGCCAAAGAGGAGTTCGTTAAAACCGAGGATTTGGAAGATATCGGAGAAAGCCGGCGGGCAGTATCAGCCTTCTTCTGCAAGCTCTGCGAAAAAACGAGATATCGCGAACTGTTCGGACACTACAGCTACTACCACAAAATCAATATTTATTATTTAGCTAAAGTATTCAAAAAAATAGGTTTAGATCTGAAACTGTCTAACCTCGAGGTCGACGATAAACCGAAACTAACAAACACAGATTGCTGCAAGGTGTGCTCTTCGGTTTACACCAAACAAGCTCCCAAATGCTTCCACAAAGTCTTCTGCGAAGGATACACCTCGTGCCCTCACTGCCCGAAAGTTTTCGAAATTCCCGAAACCCTCGACAAACATTTAACCGAAGTCCACAAAGCTCAAACCTCAGAAACGTGTCCGCTGTGCGAAGAAAACGACACGGAAGAGCACTTGCTATCACACAACGCTCCACAACTAAAACCGTACTTATTAGAATCAGACTTTTCTTGTTCACTTTGTTCCTTAACCCTGCCCAGCGGCAACACCAAAGAAGTTTTCACACATTTCAAACATGAACACTCAGTTTCGACCATTAAAATCTTGAATTTGATAGGACCAAGACCGCCGTCGCAATCCTCAGATTCCGACTCAGAATCCGATTCGCAAAGCAAAAGCGAAGAGGAATATAGGATTGACTTTAATCCGAAATATGTAAAGCTTTATTTCGATCCCGCAACTCTCTCGGTTGAAGAAACATCGATTCCTTGCGAATTTTGCCTTACGGATTTCCCGAATAAACTGAAACTGTTAGGGCATTATTACGACAAACACAGTTTCAGATTCCCTGAAAGTTTCTTCGAGTGTTTGCTTTGTACGGTCGAAGATAAGAGTTTTCGTATGGAAACTCATTTGGAACATTTTCTTGAAGAACAAAGTTTTAAGACGTTTGAGTGTGTTAAGTGTTATTTTAAGATTGGAGGCGACGAAGCGAGGAAACACATATTGGAGGTGCATGGGGATTCGTTGGACGCGTTTAATAAATTTGAATGGGGTTTGAGATGTCGGTTTTGCGAGGAAAGTTTTTGGGAGGAAGAAGAGGTCAATTGTCACGAGCTTGAAGAACATTTGGAGGAAGGCACCAAAAAGGATTTCTTGGAATGTTTCAGGTGTGAAAAGACTTTTACCAATTTGAAAAGTCTGCAGAAGCATCATCCGGCAAGTAGCCTTGAGGAAGTTTGCAAAACGTTTTCGGACGTCGCGTACCAGTGCACGATCTGCAATCGAGCCTTTCCGACTCTGGCGCATCTCCGCGATCATTTCCTGGCCACGCATCCGAAACTCACCGTTGTTTTTTGCGCGGACGAGAGTTGCAAGCGGGTGTTCTTGCAGAAAAAGTACGCTAAGGTGCATTTCAAGAAGATGCACGAGGGTCGCACCGCGGAACCGAGCAGTTACGAGTGCGAAACCTGCGGCAGGAGCTTCAACAGCCGGAAGGGGTATCTGTTGCACAGGAAAAATTCTTCAAAAAAAGGTTTCAAGTGTGTGATTTGCGGAGAAAAGTTCCACTTGCCAGAATTCAGAAAACATCATTATCAAACTGTTCATCCAGGAGAACTGGTATACGAGTGCACCGAATGCCAAAAGACTTTCAGGAACAAGTCCGGCCTACATATCCACACCAGACAACACACCGAGTTCTCCAGCGTCTGTTCCTACTGTGGCAAAGAATTTTTCCGTCGAGATTCCTACAAGGAACACCTGCTGATCCACATCGGTCCGAAGCACCGCTGCCCGTACTGTCCGAAATTCTTCACGCAAAAATCGAACCTGCACCGGCACATCCGGCTGCACACCGGCGAGAAACCCTACAGCTGTCCGCACTGTCCCAAAAAGTTCAGCGACAAGGGCGCCTGCAACTCCCACGTTTCCGTCCACACCCGCCAGGCGGAGTGCTTCTGCGAGATTTGCGGCAAAAAGTTCAGCAAACAGCAGAAGCTCCGGTACCACATGAAGCGACACACAGGCGAAGGACTGTTGATATGTGCGATTTGTCACCGCGGCTTTACGAGTCAGTACGATTTGAAGAAACACGTGACGACGCACGACCAGCAGACGCAGATAATTTGCCAGTGTGGACGGGGTTTCAGTTCGGAGAAGTATCTGAGGACGCACATCAAGCTCGTGCACGATCCCAAGAAGCAGAAGAGACAGAATGGTAATAATATCGTGGCGCTGTACAACAACCGCGTCGGGAAGTTTAACTGTTTTCAGTGTTTGCTATGCAAGAATTATTACTCGGCACGAACGACAATTTCCCGCCACTTGAAGAAGATTCACAAAATCGAACGCAAAGAGTACTCGAAACACATCCGGCATTTGGACCCCGAAGAAGAATCAAACTTCACTAGGACAGTTCTCGAAGAAAACAAAGAGGAGGGGAATAAAGACGAGGGTAAAGAAGAAAATGAGGAAAGCGAAGAGAATGAAGAGGCATTTTTGTATCCACGGCAGCTTGAGTTACAAAGTAACCCGATAGAAGTTTTTAAAACGGAAATTTTGGAAGGCACGAAGGTAGAGGAAGAAATTGATAGTAAACCTGAAGAAGTCTCGTCACAACAAATGAAAAAAACAAGGAACCGGAAGGTTAAAAACCCGTCGAAATATTGCGGTGTCGAAACCGGAAGTTGTTGA
Protein Sequence: MDKWLINSKRKLTDNSDTPSSSSTKRRPQEVSEKLKQKKRIYNDEYLATDNTSPLPAIQRTSTSINTKKKGKPVKRFTSSSIKPRKRIRSVSPSSSKYSLSDVTIIQRTHGLVKDEQALQNSLNVSTCNGPNFNCSYCGINFYSGMKLKIHLLMEHMVENCMICDLLFANAEQRAEHESKVHGANICEICHGNFDEIVEHYKNGHDAVICNYCNILLHPSEHYFKHVIEHHCAKEEFVKTEDLEDIGESRRAVSAFFCKLCEKTRYRELFGHYSYYHKINIYYLAKVFKKIGLDLKLSNLEVDDKPKLTNTDCCKVCSSVYTKQAPKCFHKVFCEGYTSCPHCPKVFEIPETLDKHLTEVHKAQTSETCPLCEENDTEEHLLSHNAPQLKPYLLESDFSCSLCSLTLPSGNTKEVFTHFKHEHSVSTIKILNLIGPRPPSQSSDSDSESDSQSKSEEEYRIDFNPKYVKLYFDPATLSVEETSIPCEFCLTDFPNKLKLLGHYYDKHSFRFPESFFECLLCTVEDKSFRMETHLEHFLEEQSFKTFECVKCYFKIGGDEARKHILEVHGDSLDAFNKFEWGLRCRFCEESFWEEEEVNCHELEEHLEEGTKKDFLECFRCEKTFTNLKSLQKHHPASSLEEVCKTFSDVAYQCTICNRAFPTLAHLRDHFLATHPKLTVVFCADESCKRVFLQKKYAKVHFKKMHEGRTAEPSSYECETCGRSFNSRKGYLLHRKNSSKKGFKCVICGEKFHLPEFRKHHYQTVHPGELVYECTECQKTFRNKSGLHIHTRQHTEFSSVCSYCGKEFFRRDSYKEHLLIHIGPKHRCPYCPKFFTQKSNLHRHIRLHTGEKPYSCPHCPKKFSDKGACNSHVSVHTRQAECFCEICGKKFSKQQKLRYHMKRHTGEGLLICAICHRGFTSQYDLKKHVTTHDQQTQIICQCGRGFSSEKYLRTHIKLVHDPKKQKRQNGNNIVALYNNRVGKFNCFQCLLCKNYYSARTTISRHLKKIHKIERKEYSKHIRHLDPEEESNFTRTVLEENKEEGNKDEGKEENEESEENEEAFLYPRQLELQSNPIEVFKTEILEGTKVEEEIDSKPEEVSSQQMKKTRNRKVKNPSKYCGVETGSC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -