Basic Information

Insect: Phosphuga atrata
Gene Symbol: RREB1
Assembly: GCA_944567605.1
Location: CALYMX010000183.1:12709-17781[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0012 0.37 14.1 0.8 1 23 77 99 77 99 0.96

2 16 0.00049 0.16 15.3 0.4 1 23 112 134 112 134 0.98

3 16 8.4e-06 0.0027 20.9 4.3 1 23 140 162 140 162 0.99

4 16 7.3 2.3e+03 2.2 0.1 2 23 220 243 219 243 0.83

5 16 0.0048 1.5 12.2 6.4 2 23 249 271 249 271 0.98

6 16 0.09 29 8.2 0.9 1 21 319 339 319 340 0.86

7 16 0.017 5.4 10.5 0.2 1 23 465 487 465 487 0.98

8 16 1.2e-05 0.0038 20.4 0.8 1 23 496 518 496 518 0.99

9 16 0.0012 0.39 14.1 3.1 1 23 524 547 524 547 0.97

10 16 0.001 0.33 14.3 2.8 1 23 919 942 919 942 0.96

11 16 0.00073 0.23 14.8 0.4 2 23 1169 1190 1168 1190 0.97

12 16 0.19 59 7.2 6.3 1 23 1196 1219 1196 1219 0.97

13 16 0.0089 2.8 11.4 2.8 1 23 1246 1270 1246 1270 0.95

14 16 8.2 2.6e+03 2.0 3.7 1 23 1320 1343 1320 1343 0.84

15 16 0.025 7.8 10.0 0.4 3 23 1390 1410 1388 1410 0.93

16 16 0.011 3.5 11.1 5.9 1 23 1416 1438 1416 1438 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0012	0.37	14.1	0.8	1	23	77	99	77	99	0.96
2	16	0.00049	0.16	15.3	0.4	1	23	112	134	112	134	0.98
3	16	8.4e-06	0.0027	20.9	4.3	1	23	140	162	140	162	0.99
4	16	7.3	2.3e+03	2.2	0.1	2	23	220	243	219	243	0.83
5	16	0.0048	1.5	12.2	6.4	2	23	249	271	249	271	0.98
6	16	0.09	29	8.2	0.9	1	21	319	339	319	340	0.86
7	16	0.017	5.4	10.5	0.2	1	23	465	487	465	487	0.98
8	16	1.2e-05	0.0038	20.4	0.8	1	23	496	518	496	518	0.99
9	16	0.0012	0.39	14.1	3.1	1	23	524	547	524	547	0.97
10	16	0.001	0.33	14.3	2.8	1	23	919	942	919	942	0.96
11	16	0.00073	0.23	14.8	0.4	2	23	1169	1190	1168	1190	0.97
12	16	0.19	59	7.2	6.3	1	23	1196	1219	1196	1219	0.97
13	16	0.0089	2.8	11.4	2.8	1	23	1246	1270	1246	1270	0.95
14	16	8.2	2.6e+03	2.0	3.7	1	23	1320	1343	1320	1343	0.84
15	16	0.025	7.8	10.0	0.4	3	23	1390	1410	1388	1410	0.93
16	16	0.011	3.5	11.1	5.9	1	23	1416	1438	1416	1438	0.98

Sequence Information

Coding Sequence: ATGCAAGGAGTAGTTTGTATTCCATTAAGACAATTTGGTTGTACGACACAGGATAAAATTGAAACAGGCATGGATTTAACAACGGAACCAATAACCAAAGACATAAACCAAAGTGATTCAGGAATCTTCTCAGCCACCAGCAATACAACACTTCCTGAAGAGAATCGAACGCAACTTTCAGAAAATGATACTGATAACAGATCGGATTGCAGTTCACCTGATAGAAAATACTTATGTCCAATTTGTGAAATGATGCTTACCTCACAACACGAGTTTACATTACACATACGTTCACACAATAATGACTCCGAGGTTCAAGATCCTGAGAAAGGATATACCTGTAGGATTTGTTTCAAAGTGTTAAGTTCGAGTTCTAGTCTAGATAGGCACGTTTTGGTGCACAGCGGTGAAAGGCCTTTTACATGCAAATATTGCGGAGACACTTTTACAACGAACGGTAATATGCATAGGCATATGAGAACACATAAAACAGAAAATTACGAATCGGATGGCAGCACTGACAGTAATGTCAGTTCAGGGTCTAAAGGCATTGAATTTAATAATAATAAGGTGGAAAGGTACGAAAAGAGAAAGTTAGAAGATGACTCTTACAAGTTACCGAGAAAAAGACCTCATTTAGAATTAGAAAAGTCTATCAGATGTCAAATATGTGATAGAGAAGATTTCAATTCAATTAAAGCTCTCGAAATGCATCTCGAAGACAACCATCCTGATTATCTAGCCAAGTGCCATCAATGCAATCAAATATTTAAAAATCATAAGAAACTCAATGCACATCGTAATACTGTTCATGCTGATGAAAATGGAAAATCTAAAACATCAGTAGTAGGTTTCAAAGATCTTACGTTTATTGATTTTAGTAGCGAAAAGTTCCCGCACATTGCTCGATACGAATGCGAAAAAAAATTTCATAAAGCGGCTTCCGGCTTAAAATTTCAATGCAATAAATGTGGACGGGCTTTTCCTTGCGAAAAGTCTTTAGATATTCATACTAGAGATTGTGGACTGGACCTAAGCCTTAATAGCGAATCAGGGAATTTTAATAAACGTTGTATGAACGAATCTGAAAGATTGAATTTTTTTTCAGGATTAAATTTGCAGGACAATTCTCCAGAGAAATTGATTCCATCTCCACTAAGTGAAGGGCCTAAAAAATTCCAACAAAGATTATTAGAAACAATCAAGTCAATTGATAGTAGCAACGATTTGGCAGAGATTCAATCTATTATTTCTATGACCACAAGTGGTAGTTTATTGCAACATTTGCAGAATAAAAACGAAGTAATGCAAGCAGAGAATGAGAAAACAGAAGAAGAAGAATCTCAAGACGTCTTCGCTCAAGAATTCCGTAAAATGAAACTGCGTGGTGAATTTCCATGCCGTTTATGTACCGCAGTATTTCCAAATTTAAGAGCTTTGAAAGGTCACAACCGCACCCATTTGAATAGTACCAATAATGGTACTTACAGATGTAATATGTGTCCTCATTCTTCGATCGATAAGGCGGCCTTAATCCGGCACATGCGTACCCATAATGGTGACCGTCCTTACGAATGCTCGCTCTGTAACTACGCTTTCACTACCAAAGCGAATTGTGAAAGACATTTACGGAATAGACATGCAAAGAGCACGCGCGAAGAAGTAAAAAAATCAATTATTTATCATCCATCGGAAGATCCCACAAACGAAGATATTACAAAACAATTGGAAACTAAAAAATTGAATACTAGCACCAATTCAATAGATTCCAACGATTTAACTCCAGAAAAAATCCGTAGCTCTACGCCGATCATTCCAGCATTTCCAGATATACAAAAAATCAAAGAAATTCTTCCAAACAAAGATTTTCCGTCGCTCTTGCCTATGAGCACGAACCTCCGTTATTGTGAGAGGAACTGTGTATCCTCATTTCCTCCTGAAAACGCTAAATCTTCAAAAGAACATAGAACTGAACCTACCTCTCCATATTTACCACCTCAAATATCTTTCGCACCTAAATTTCCAAACACTTCAACACCTCAAAAACAAAACCCCAAAATACAAGTAAAAAATTTACAAACATTGAAAGAAATCCCTGAATTCGAATATTCTGATGAAGATGATTGCAACGATGAGCCAATGGATTTGAGTAAAAAAGAAACAGAAGATAATAAGGTTACTGAAGAAGATTGTGCAGAAGACCTAACTAGGAAAAATGGAGAAAATCCATTAAGTATGAGTGAAATTTTGGCACAACAATTATTAAAGAATACACCTAAAATCGACCATGCGGCTTTATATGCTTCGCATCTATTTTCAAGGAATTTTCCTAATTTTCCGAATTGGTCTACGTTTCCAATTAACCCTCTAATTTTCCCCACTATGCAACCTCCTATTTTGCAAGATCAAGAAATCAAAGAACGTTTACAAAGGATACAGCTATGTGGTGGAGGTATGATCATGGACAACTTTGCTGAGCGTTTGAAAAGTTTTTATCCGCCAAACAGTTTTCCAGGGTTTAATAATATGAAACTTGGCGAACAAAAGCAAGAAAAATATTCTTCGCCGCAAGAAGAGTTGAAACCTTTGAGCGTAAATATTGAGTCTAATTTTAACGATAATATTAAAATGAAGAGTCCTGTTGTTCAATCTAAGCCAGAACTGTTGCAATCGCCAAATTCTGTTAAAATGGTCATAAAAAACGGCATTTTAATGCCGAAACAGAAACAAAGACGTTATAGAACTGAGAGACCTTTTTCCTGTGAACATTGTTCTGCGCGTTTTACATTAAGATCGAATATGGAAAGACATATTAAGCAACAACATCCTCAATACTGGTCACAGCGTCAACGATCTGCTGTTGGAAATCCTGGGAGAAAACCCCAAATCTTACCACCAACTATCAAAACCTCATTATGTGAACTGAGTATTCCAAATTACGAAGTTCAAAAAATGCAAGACTTCGATGAAACCAAAGATAACACCATTTCTGATAAGCTTAAGTACGCCATCTTAGCTCAACATTTGCGTGCAGTTCAAGAAACCAAATTAGAAAAAAAAGATGAAGATGAAGACTGTGCTTTAGTAATTGATGAGAATGATGATATGCCAAAAACAGAGAATCAAAATATTCCTGTTAATTATAGCTCGAATAAGACAAAAATCCTAGAAGAAAAACTTAAAGAATTAAGAGAAAAGCAATTATTGAATGAAAAAATCAACAATGAGGTTAAGACTATTAAAAATGAAGAAGGCCAAGATTTAGTACCAGTTTCAAGACTATTAGATAATGCTTCACAACAGCCGTTCAAAGAGTATTTCCGAAGAGAAGGTGATGAGCATGAGGTAGAAGGAATTAGCGAAGAAGATGAAGAAGGTTTGGTAGCTAGTGGTAGCACTAGCGAAGGAAATTCTGGAACTGATGAAAATAGGTCGGAAAGCGAAACTGCTGCAAATCAACCAATCAAAAAAAAATCCGCATACTCTTTGGCTCCGAATCGCGTGAGTTGTCCTTATTGTAGCCGCAAATTTCCATGGACTTCATCGTTACGGCGACATATTTTAACCCATACTGGTCAAAAGCCATTCAAATGTAGTCACTGTCCTCTGCTGTTTACTACAAAATCGAATTGTGATCGTCACTTACTCCGTAAACACGGCAACTCTGCGACGACAATCTCAAATGAAACCACGAATAATAATAATTTCATGATGAGAAACGTACCGGAAAGACCCTTCAAATGCTCGAGCTGCCCCAGCAGCACATTTTCAACCTATTCTAACTTAAAAAAACACATGAGTTCAAAACATGGAACTCAAGACGATAGGCAGGGCTATGAAGCTGGTAGTTCAGAAGATGAAAAGAACAATAGTGATCAAAAAAGCGACTGGGAAGCCCAAATAGCTCACAGCAAACATTCTACCAGTGAAAATCAAGTGCCTAACTCTGATTTACCTTTCAAATGCCATTTATGTGACAATTCTTTTGGAGAAAGGCAAGACTGTTTGGATCATATTAAAGATAAACATTCCTCTGAATATGAACTACTAATGGCAAAAAACGCATTGGATGCTAACGCTTCTACGCCTGATGAAGGAGGCAATCACGAAGATGAAGACAACGAAATCCGTGGGAAATTTCCAGATTATTCTAATAGAAAAGTGATTTGTGCTTTTTGTATGAGACGGTTCTGGTCTGCTGAAGATCTTAGGCGGCACATGCGTACGCACACTGGTGAACGTCCGTTTAGTTGCGACATATGCAGACGTCGCTTCACCTTGAAGCACAGCATGTTAAGACACAGGAAAAAGCACAACGTTGCATTCGATAATGATAATGGACAAAGCGACGAGGACATTGTTATGGAAAAATCAGTTAAAGTTGAAAATAATAATTTGATTAACAAATTTGGAAGTGAAAAAACGGATGAGTCAGATGGTAATGAGGGTAGTGACCTGATAAGCAACTTACTAGGTATAAGAGATAGATCTATTATTGAGAAAGTATTGACAGCATCAGCTGATGATGCTGCTAAACTGCTTGGTGTAGGAGGACAGGAATAA
Protein Sequence: MQGVVCIPLRQFGCTTQDKIETGMDLTTEPITKDINQSDSGIFSATSNTTLPEENRTQLSENDTDNRSDCSSPDRKYLCPICEMMLTSQHEFTLHIRSHNNDSEVQDPEKGYTCRICFKVLSSSSSLDRHVLVHSGERPFTCKYCGDTFTTNGNMHRHMRTHKTENYESDGSTDSNVSSGSKGIEFNNNKVERYEKRKLEDDSYKLPRKRPHLELEKSIRCQICDREDFNSIKALEMHLEDNHPDYLAKCHQCNQIFKNHKKLNAHRNTVHADENGKSKTSVVGFKDLTFIDFSSEKFPHIARYECEKKFHKAASGLKFQCNKCGRAFPCEKSLDIHTRDCGLDLSLNSESGNFNKRCMNESERLNFFSGLNLQDNSPEKLIPSPLSEGPKKFQQRLLETIKSIDSSNDLAEIQSIISMTTSGSLLQHLQNKNEVMQAENEKTEEEESQDVFAQEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRTHLNSTNNGTYRCNMCPHSSIDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKSTREEVKKSIIYHPSEDPTNEDITKQLETKKLNTSTNSIDSNDLTPEKIRSSTPIIPAFPDIQKIKEILPNKDFPSLLPMSTNLRYCERNCVSSFPPENAKSSKEHRTEPTSPYLPPQISFAPKFPNTSTPQKQNPKIQVKNLQTLKEIPEFEYSDEDDCNDEPMDLSKKETEDNKVTEEDCAEDLTRKNGENPLSMSEILAQQLLKNTPKIDHAALYASHLFSRNFPNFPNWSTFPINPLIFPTMQPPILQDQEIKERLQRIQLCGGGMIMDNFAERLKSFYPPNSFPGFNNMKLGEQKQEKYSSPQEELKPLSVNIESNFNDNIKMKSPVVQSKPELLQSPNSVKMVIKNGILMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQYWSQRQRSAVGNPGRKPQILPPTIKTSLCELSIPNYEVQKMQDFDETKDNTISDKLKYAILAQHLRAVQETKLEKKDEDEDCALVIDENDDMPKTENQNIPVNYSSNKTKILEEKLKELREKQLLNEKINNEVKTIKNEEGQDLVPVSRLLDNASQQPFKEYFRREGDEHEVEGISEEDEEGLVASGSTSEGNSGTDENRSESETAANQPIKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNSATTISNETTNNNNFMMRNVPERPFKCSSCPSSTFSTYSNLKKHMSSKHGTQDDRQGYEAGSSEDEKNNSDQKSDWEAQIAHSKHSTSENQVPNSDLPFKCHLCDNSFGERQDCLDHIKDKHSSEYELLMAKNALDANASTPDEGGNHEDEDNEIRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHNVAFDNDNGQSDEDIVMEKSVKVENNNLINKFGSEKTDESDGNEGSDLISNLLGIRDRSIIEKVLTASADDAAKLLGVGGQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -