Basic Information

Insect: Phosphuga atrata
Gene Symbol: -
Assembly: GCA_944567605.1
Location: CALYMX010000836.1:41964-46501[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 5.6e-06 0.0018 21.4 2.6 1 23 450 472 450 472 0.99

2 8 1.7e-07 5.4e-05 26.2 0.6 1 23 531 553 531 553 0.98

3 8 3.2e-06 0.001 22.2 0.3 1 23 559 581 559 581 0.98

4 8 4.4e-07 0.00014 24.9 0.4 1 23 587 609 587 609 0.97

5 8 0.00024 0.078 16.3 0.4 1 23 615 637 615 637 0.95

6 8 0.0038 1.2 12.5 0.3 1 23 644 666 644 666 0.92

7 8 8.6e-06 0.0027 20.8 1.6 1 23 672 694 672 694 0.97

8 8 2.7e-06 0.00085 22.4 3.8 1 23 700 722 700 722 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	5.6e-06	0.0018	21.4	2.6	1	23	450	472	450	472	0.99
2	8	1.7e-07	5.4e-05	26.2	0.6	1	23	531	553	531	553	0.98
3	8	3.2e-06	0.001	22.2	0.3	1	23	559	581	559	581	0.98
4	8	4.4e-07	0.00014	24.9	0.4	1	23	587	609	587	609	0.97
5	8	0.00024	0.078	16.3	0.4	1	23	615	637	615	637	0.95
6	8	0.0038	1.2	12.5	0.3	1	23	644	666	644	666	0.92
7	8	8.6e-06	0.0027	20.8	1.6	1	23	672	694	672	694	0.97
8	8	2.7e-06	0.00085	22.4	3.8	1	23	700	722	700	722	0.97

Sequence Information

Coding Sequence: ATGCAAGAAGCCGAGAGTGGTACCAAAATATGCGCAGCGGCGGGCGGCTTCGCCCCGAGCCGCAAAAGTCGGATTCCGGGTTGCGGTTTCGGTCTGGTGCGTCCGAACCTAGGGGAGTTGAGTCGCGAAAATGAGACCACTCAACGGGTCTCTCGGTTGACACCAGCAAAATGTACTATTCCAATTGGGCCGCTGCTGCCACTTCTGGGCGCGGCAGGACCGAGGACCAAAGCTGGGGATGCACAACGTGCGAACGGACATGCGCAGTTAAAGCATAGAAGACGACAAGAAGAAGCGGTTAAAACACCGAAGATCTACCTCTTCCGGCGGCATAAAAAAGCCGAATTTGACCTTTTCAAAAACCCACGTGGTGCGGATCCCCAGGTGAAATCCGGGAAACGCCACATGTCAGTCGTCTCAGAATTAATCGAAATTTGTGATTCCGCCGTGATCTGGCGATTCAGGCCGAACGCTTCCCCACACAGACCCCAAGAGGCTCAGCAGAAAAACCCTCAGCGCAAAATAGCTTTACACACCGACAGTAACATGCTAAAAAATCCTAGAAATCGCTGCAGAATCTGTTTGGAAGCAACCAACGGCAAAATCGAGTTGAATCAAACGATACACTACAAAGAAACTGGGATTTTATTAATGGAACTGTTGGAGTTTTGTGTGAACGAACAGATGTACGAGAATGGAAAAGCCGACGGACTTTGTTTGGATTGTATGGAGAAAGGAATGGTTTGTTACGAGTTTAAGAAACGATATAAAGTATCTCAAGCCGTTTTATTGAAAGAAATGGAAGAAAATAATGGCTTTGAAATTAAAGTTGAAGAGGATTTCGAAGAGGGAAGTTTCGTAGATGAATCAGAAAATATAGTAATGAAGCACGAAATTTTGGAGGAAGAAGAGATAGAGCAAGTTAAAGAAAACCCAAGTGAATGCGAACTACCAACAACAGCAACTGAGAAATTAACACCAACAACAACATTGAGTGATGAACCAACATCAGCTACGCCTCATCAACCAACAATTTCAATGGGAGAAAAGGAAGAAAACGATGGCTATGCAATTAAAGCTGAAGAGGATTTTCAAGATGGAAGTTTCGAGGTTGAATCAAAGAATATAGTAATAAAGAACGGAATTTTGGGGGAAGAAGAGCTCGAGCAAGTTAAAGAAAATCCAAATAAATTCGAACTACCAACAACGACAACAGAGACAGAGAAATCAACTCCAACAACTACAAGAAGTGATAAACTAACATCAACATTGTCTGGAGATAAACAAACATTAACACCACCTGATGATCAACCAACAATTTCATTGGGACAAAAGGAAAGTGTTGAATATAAATGCGAACTTTGCGAGAAAACTTTTAAATTGCGCTCTGATCTCGTCCGCCACAAACGCAAACACACGCAAACCGGAAAACAACGGAACCGTTGCAGTTACGTCCAAGAATCTTCTGCAGCGTTGGTGCAAAACATGAGAAACGTCTTTCAACAAGAAACTTTGAAATACACCGATCCACTACTACCGGTAACCGAGACTGATAAACCAACACCACCACCAACAACTAAGATTGATAAACACACGTGCGAATATTGCGGGAAGAGTTTGAGCCAGGCCTACAATTTGGTGGCTCATATGAGAATCCACACCGGAGAGAAACCTTTCTCGTGCAAGGAATGCGGGATGAATTTCAGCCGCGCCGGCACTTTGGCATCTCACAGGAGAGTCCACACCGGAGAGAAACCTTACTCTTGCAAAGAATGTGGAAGAAGTTTCGCACATCCCTCGGCGTTGAAAGTGCACCAAGTTGTGCACACGAAGCAAAAGGATCATGTTTGCCAGAAGTGCGGAGCAACTTTCGCCAGAGCCCTGTATTTAAGAAGACATGTAGTAATACACTCGACAGAGCGACCGTCGTATAAATGCACTATATGTAAGAAAGCCTTTACATCGATTTGGGCGGAGAAGGGGCACATGCTCACGCACACGGAAGTGCGAAATTACGCATGCGAGTTCTGCGAGAAGCGATTCAAGAGGAGCTCCAGCCTCAGCGTTCACCGGAAGATTCACACGGGTGAAACACCTCACATCTGCAAAGTTTGCGGCAAAGGTTTCATACAATCTTGTGATTTAAAAAAACACATGAACACTCATTTGTCCAAATAA
Protein Sequence: MQEAESGTKICAAAGGFAPSRKSRIPGCGFGLVRPNLGELSRENETTQRVSRLTPAKCTIPIGPLLPLLGAAGPRTKAGDAQRANGHAQLKHRRRQEEAVKTPKIYLFRRHKKAEFDLFKNPRGADPQVKSGKRHMSVVSELIEICDSAVIWRFRPNASPHRPQEAQQKNPQRKIALHTDSNMLKNPRNRCRICLEATNGKIELNQTIHYKETGILLMELLEFCVNEQMYENGKADGLCLDCMEKGMVCYEFKKRYKVSQAVLLKEMEENNGFEIKVEEDFEEGSFVDESENIVMKHEILEEEEIEQVKENPSECELPTTATEKLTPTTTLSDEPTSATPHQPTISMGEKEENDGYAIKAEEDFQDGSFEVESKNIVIKNGILGEEELEQVKENPNKFELPTTTTETEKSTPTTTRSDKLTSTLSGDKQTLTPPDDQPTISLGQKESVEYKCELCEKTFKLRSDLVRHKRKHTQTGKQRNRCSYVQESSAALVQNMRNVFQQETLKYTDPLLPVTETDKPTPPPTTKIDKHTCEYCGKSLSQAYNLVAHMRIHTGEKPFSCKECGMNFSRAGTLASHRRVHTGEKPYSCKECGRSFAHPSALKVHQVVHTKQKDHVCQKCGATFARALYLRRHVVIHSTERPSYKCTICKKAFTSIWAEKGHMLTHTEVRNYACEFCEKRFKRSSSLSVHRKIHTGETPHICKVCGKGFIQSCDLKKHMNTHLSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -