Patr042776.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Phosphuga atrata
Gene Symbol
Znf711
Assembly
GCA_944567605.1
Location
CALYMX010000726.1:447488-456872[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 3.7e-05 0.012 18.8 3.3 1 23 292 314 292 314 0.99
2 10 0.00044 0.14 15.5 0.3 2 23 324 344 323 344 0.97
3 10 2.2e-07 6.9e-05 25.9 0.8 1 23 350 372 350 372 0.98
4 10 6.5e-07 0.00021 24.4 1.2 1 23 378 400 378 400 0.97
5 10 1.9e-06 0.00059 22.9 2.8 1 23 438 460 438 460 0.98
6 10 9.9e-05 0.032 17.5 2.3 1 23 789 811 789 811 0.99
7 10 0.00016 0.052 16.8 0.3 2 23 821 841 820 841 0.97
8 10 2e-05 0.0065 19.7 3.5 1 23 847 869 847 869 0.98
9 10 7.7e-06 0.0025 21.0 1.8 1 23 875 898 875 898 0.92
10 10 3.3e-07 0.0001 25.3 3.2 1 23 904 926 904 926 0.98

Sequence Information

Coding Sequence
ATGCTGTCAGGCAGAGATAAATATCCCTTGCGTCCGGCATGGTCGTTGTATCATCCAGAAAAGCATCGAATGCAAATGTCTTTACAGACAGAAAACAAAATAATCCTATGTCCGGAAAATCGTTGCAGAATCTGTTTGGAAGCGACAAACGGCAAAATCGCGTTAAACCAAACAATAAATTATGAGAAAGCTGAGATTTCGCTGAACGAATTGTTGGAATTTTGCGTGAACGAACAGGTCTGCGAGAATGGAAAAGCAGACGGACTCTGTTTAGCTTGTATGGAGAAAGGGATAGTTTGTTACGAATTTAAGAAGAAGTTTGAGGAATCCCAAAGCATTTTACTGAAAGAAATAGAAGAAGGCAATAGCTTTTTAATAAAGACTGAAGAGGATTTCAAAGAGGAAGATTTGGTGGAAATAACAGAGACTGAGATATTAAAAGAAGAGATTTCGGATAAGGAAGTATTAACAGAGAATGATGAGATAGTAAATGAAGAGATCTTGGAAGATGACATATTGGTGGGTGCAACAGAGAATGGGGTATTAAATGAAGAGATTTCAGATGAGGAAGTATTAACAGAGAATGAAGAGATCTTGGAAGATGACGTATTGGTGGTTGCAACAGAGAATGGGGTATTAAATGAAGAGATTTCAAATGAGAAAGTAGTAAAAGAAAATGTTGAGATATTAAAGGAAAAGAGTTTGGATCAAAAAGTGCATATTACAGAAACTATTAAATGTCTTGATGACCAACAAGATATTTTGAATACACCAGGTGATAAACCAACAGCGATATCTTTCAAAGGTAGAAAAGGTAGTCTGAGGCGCCACAAGCTCAAACACTCTTCTCTAGAACAAGAAAACACCCCTAAATACAAATGCGATGTTTGCGAGAAAACCTTTAAATTACGCAACAATTTCGTCAAGCACACTCGCAGACACCGGCAGGAAGTCGTCCGAAAAAAAGTGCCGTGTCCAAGTTGCGGCAGAAAATTCTACAAAAATTATCTAAACGTCCACATGTTGACACATTCCGGCGAAAAACCATTTCCGTGCGAATTTTGCGGGCGGAGTTTCTCGCAACGCAGTAATTTGGTCTCGCACAGACGAATCCACAGCGGGGAAAGACCTCATAAGTGTTCGGAATGCGGGAAAGGTTTCACTCGGAATGCGTCATTGCGCAGACACCTAGTCGTACACTCCGAAAAAAGGGAGAAAAGGGAGAAAAGGCCTTTCCATATATCCGGGACAACTTTCGTCGGATCCAGCACGTTGCGTATTAATATAAAAACACCCTCTGCAGAGCACCTTTTCAAGTGTACCATATGCAAAAAAAGGTTCAATCGCAGGTGGAACCTCAATGTTCACCGAAAAATTCACACCGGCGAATTCACACACGTCTGCAAAGCAGAGATAAATATCCCTGGCGTCTGGCATGGTCGTTGTATCATCCAGAAAAGCATCGAATGCAAAATGTCTTTACAGACAGAAAACAAAATAATCTTATGTCCGGAAAATCGTTGCAGAATCTGTTTGGAAGCGACAAACGGCAAAATCGCGTTAAACCAAACAATAAATTATGAGAAAGCTGAGATTTCGCTGAACGAATTGTTGGAATTTTGCGTGAACGAACAGGTCTGCGAGAATGGAAAAGCAGACGGACTCTGTTTAGCTTGTATGGAGAAAGGGATAGTTTGTTACGAATTTAAGAAGAAGTTTGAGGAATCCCAAAGCATTTTACTGAAAGAAATAGAAGAAGGCAATAGCTTTTTAATAAAGACTGAAGAGGATTTCAAAGAGGAAGATTTGGTGGAAATAACAGAGACTGAGATATTAAAAGAAGAGATTTCGGATAAGGAAGTATTAACAGAGAATGATGAGATAGTAAATGAAGAGATCTTGGAAGATGACATATTGGTGGGTGCAACAGAGAATGGGGTATTAAATGAAGAGATTTCGGATGAGGAAGTATTAACAGAGAATGAAGAGATCTTGGAAGATGACGTATTGTTGGGTGCAACAGAGAATGGGGCTTTAAATGAAGAGATTTCAGATGAGGAAGTATTAACAGAGAATGAAGAGATCTTGGAAGATGACGTATTGGTGGTTGCAACAGAGAATGGGGTATTAAATGAAGAGATTTCAAATGAGAAAGTAGTAAAAGAAAATGTTGAGATATTAAAGGAAAAGAATTTGGATAAAAAAGTGCATATTACAGAAACTATTAAATGTCTTGATGACCAACAAGATATTTTGAATACACCAGGTGATAAACCAACAGCGATATCTTTCGAAGGTAGAAAAGGTAGTCTGAGGCGCCACAAGCTCAAACACTCTTCTCTAGAACAAGAAAACACCCCTAAATACAAATGCGATGTTTGCGAGGAAACCTTTAAATTACGCAACAATTTCGTCAAGCACACTCGCAGACACCGGCAGGAAGTCGTCCAAAAAAAAGTGCCGTGTCCAACTTGCGGCAGAAAATTCTACAAAAATTATCTAAACATCCACATGTTGACACATTCCGGCGAAAAACCATTTACGTGCGAATTTTGCGGGCGGAGTTTCTCGCAACGCTGTAATTTGGTCTCGCACAGACAAATCCACAGCGGGGAAAGACCTCATAAGTGTTCGGAATGCGGGAAAGGTTTCGCTCGGAATGCGTCATTGCGCAGACACCTAGTCCACGTTCACACCGGCGAATTCACACACGTCTGCAAAGTTTGCGGCAAAGGTTTCAGATCTGTTTCCAATTTCAAAAGACACATGAAAACTCATTAG
Protein Sequence
MLSGRDKYPLRPAWSLYHPEKHRMQMSLQTENKIILCPENRCRICLEATNGKIALNQTINYEKAEISLNELLEFCVNEQVCENGKADGLCLACMEKGIVCYEFKKKFEESQSILLKEIEEGNSFLIKTEEDFKEEDLVEITETEILKEEISDKEVLTENDEIVNEEILEDDILVGATENGVLNEEISDEEVLTENEEILEDDVLVVATENGVLNEEISNEKVVKENVEILKEKSLDQKVHITETIKCLDDQQDILNTPGDKPTAISFKGRKGSLRRHKLKHSSLEQENTPKYKCDVCEKTFKLRNNFVKHTRRHRQEVVRKKVPCPSCGRKFYKNYLNVHMLTHSGEKPFPCEFCGRSFSQRSNLVSHRRIHSGERPHKCSECGKGFTRNASLRRHLVVHSEKREKREKRPFHISGTTFVGSSTLRINIKTPSAEHLFKCTICKKRFNRRWNLNVHRKIHTGEFTHVCKAEINIPGVWHGRCIIQKSIECKMSLQTENKIILCPENRCRICLEATNGKIALNQTINYEKAEISLNELLEFCVNEQVCENGKADGLCLACMEKGIVCYEFKKKFEESQSILLKEIEEGNSFLIKTEEDFKEEDLVEITETEILKEEISDKEVLTENDEIVNEEILEDDILVGATENGVLNEEISDEEVLTENEEILEDDVLLGATENGALNEEISDEEVLTENEEILEDDVLVVATENGVLNEEISNEKVVKENVEILKEKNLDKKVHITETIKCLDDQQDILNTPGDKPTAISFEGRKGSLRRHKLKHSSLEQENTPKYKCDVCEETFKLRNNFVKHTRRHRQEVVQKKVPCPTCGRKFYKNYLNIHMLTHSGEKPFTCEFCGRSFSQRCNLVSHRQIHSGERPHKCSECGKGFARNASLRRHLVHVHTGEFTHVCKVCGKGFRSVSNFKRHMKTH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
-
80% Identity
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