Basic Information

Gene Symbol
ZFX_1
Assembly
GCA_944567605.1
Location
CALYMX010000441.1:351330-368361[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 27 0.73 2.3e+02 5.3 0.2 3 23 105 125 104 125 0.95
2 27 3.8e-05 0.012 18.8 0.9 2 23 130 151 129 151 0.97
3 27 1.4e-05 0.0044 20.2 0.4 1 23 156 178 156 178 0.99
4 27 0.00064 0.2 15.0 2.7 1 23 184 207 184 207 0.96
5 27 0.79 2.5e+02 5.2 0.2 1 16 212 227 212 229 0.89
6 27 0.00019 0.062 16.6 4.8 1 23 364 386 364 386 0.99
7 27 0.01 3.3 11.2 2.0 1 23 412 434 412 434 0.98
8 27 0.00078 0.25 14.7 1.6 1 23 440 463 440 463 0.94
9 27 5.6e-06 0.0018 21.4 3.1 1 23 470 492 470 492 0.98
10 27 0.00039 0.13 15.6 0.9 2 23 499 521 499 521 0.97
11 27 0.012 3.9 10.9 0.0 1 22 630 651 630 651 0.96
12 27 8.8e-05 0.028 17.7 3.3 2 23 659 680 658 680 0.96
13 27 0.00014 0.046 17.0 0.0 1 23 686 709 686 709 0.98
14 27 0.0012 0.39 14.1 0.1 1 23 749 771 749 771 0.94
15 27 1.3e-06 0.00041 23.5 1.1 1 23 777 799 777 799 0.97
16 27 4.1e-05 0.013 18.7 1.3 1 23 805 827 805 827 0.97
17 27 3.8 1.2e+03 3.1 2.2 3 23 931 951 929 951 0.92
18 27 0.0041 1.3 12.4 3.9 1 23 957 979 957 979 0.98
19 27 0.02 6.2 10.3 3.4 3 23 1020 1040 1018 1040 0.96
20 27 0.00037 0.12 15.7 2.6 1 23 1043 1065 1043 1065 0.98
21 27 0.077 24 8.4 1.2 1 23 1100 1122 1100 1122 0.94
22 27 0.024 7.5 10.0 2.4 1 23 1128 1151 1128 1151 0.95
23 27 0.00046 0.15 15.4 5.6 1 23 1162 1184 1162 1184 0.98
24 27 0.0061 1.9 11.9 0.5 3 23 1191 1211 1189 1211 0.97
25 27 0.0011 0.35 14.2 1.6 1 23 1217 1239 1217 1239 0.95
26 27 1.5e-05 0.0047 20.1 2.2 1 23 1245 1267 1245 1267 0.98
27 27 0.0075 2.4 11.6 0.3 1 21 1273 1293 1273 1294 0.93

Sequence Information

Coding Sequence
ATGATCTTACAGGAAGGAGGCTTGGATCGAAAGTTTTCGGAAGACCCTCCAAAGCCGACAAGAAAGAGCGGGATAGAGTATCGAGTAGAAGAAGAATTAGTTAAGGTAGATACCACATGTGGACCTAAAGTGGTTCCCAAGAGGTTTGTAAACATTACCCAAAACAAAGAAGAAACCGTGACAATTAAAACAAGGAATGGAAAGTCTATCCCGTTGCTTTTAAAATCATTACCGGTTGTCTTTAAAAAAAATATTGCTCCAGTTGATCGGATAACGTTGGCGAGCGAGAGGAAAAAACCAGTTCCAAAAGCATGTGAGCAATGTGGAAAAGTATTATTCAATGACAGTATTTATAGAAAGCATCTTTTAATACATACCGGGAAGATGACATGTCCGACTTGTAACAAAGTTTTAAAAAACGCGAGTTCTTTGAAAAGCCATCAATACACTCACAAAGGTCTCAAATACAGTTGCGAAAAATGTGATACCTCATTTGCTTCCAAGAAAGTATTAGCTGCTCATATCAGGCGACACGATGGCGATTATTCCCATAAATGCGAACTTTGTGGAAAGGAATACTACAACAGTAAATCTTTCAATTATCACATGGAATCCGAGCATGTTGGTATTAGATATACTTGCAAAATTTGTGGTTCGGTGTTAAAAAGTAAACGCAATATGTACCAACAAAATATTTTTAATCCAAATTATGGGATCGAAACTATGGAAACTTGTGACTTGAACATACAATCGAAATATTTGCTTTTGCAACCAGACGCGGCTCTTCCCGAGAATAATTTATTGGATAGAGCCGTTGAAGAATTAAACGACCCTGATACAGACTTGCTAAATTTGTTAGCAAGTGAAGAAGACTGCACTTCCATTTTACAAAATATTGCAAGCAACGAACAATTTGAAAGCTTGATCAACAACGATTCCGATTTTCATGCCGAGAATCTTGAAAACTTCATGGACCCAAACTACTGCGAGAAAATCCCGTACATTCCGAATATAGAACAAGATCTGATCGAAACCCTGCCTCCCCCTGAAATACCCACCGAGAACTCTTGCATAAAACCAATAGGCGAGTTTAAATGTGCTCAATGCGATAAAGTTTGTACAAGCAAAAAGATGCTGAGATACCACTTAAAAACGCATTCTGATGTTCGACCGATTGTTCCAAGGGAAGATATTGGAATCTATAGTAAGCAAATTCAACAAAGTCAAGGAATGTTTAGTTGTCCAATATGTTCAAAACAAAGCGACTCAAAGAAAAAAATCAAACGACACCTCTACACGCACACGGAAGAACGGCCATTTCTCTGCACGCAATGCTCAAAAACTTTCAAATTAAAGTCAGATTTGTCCAGCCATAACAGAATAGTGCACTTACACAAGCCAGACAATTATTCCTGCGATTTGTGCTCGAAACACTTTAAAAACAAATCTTTGCTAACGGCACACCAGCGTTGGCACAGCAATGAATACGTAGAAAAGTGCGATATTTGTTCCCGAACGTTCTTCTCCTCAGGTTTACTCAGTTCGCACATTAAAATGACCCACGGTGGACCCGAAGTTTGTGATATCTGCAACAAAACAGTTCCTGTATGCTTACCAGCTGGAATTAAACTCACCAAAGTAATGCTTCTAAACGAAAACAATGAAAATCTGACCGAAAAAAGATCTCCAGCAGTTACCCAAATAAATTGTGTTAAAACAAGATCAGCTACAATTAGAGAAGATTTATTAGAAAAAATATCTAAAACTGGCGTACGTATTGCCAAAATCCCAACAAAACTAGTTTCTGAAGAAAAAGAAATTAAGAAGCACGGACAAACAAAATCTGCTGCTCAAAAGAAGTCGTTTGTTCCAATAAGAAACACGACTTATATCTGTGTAATATGTGGAGACAACTTTCCGAATTTTGACTTACTAAACGTGCACATGAAAACTCCTTGTAGAGTGGTCATTTGTTCTTGTCCGTTTTGTTCCAAAGAATTTAAGAACAAATCTCGTTTAAACGCGCACATATCCACCCACAAAACAAAACCTAAATATCCTTGCGAAAAATGCGGAAAAGAACTTGCCAATACAATTGCTCTTCAAGCTCACATGAACACCATGCATACAGAATATTTCGACGCCACTGCAATTGGATTCAAATGTAAATTATGTTCGCTTGAAATGCCCGGAAAACCGCAAATACTGAACCATATTAATTCCAAGCATTTGCATGTCAGCACCTTCTTATGCGATATTTGTGGGAAAAGTTTCCTGCAAGAGAGCGGGCTGAAAGCCCACGCTTCGATACATAGCGAAGAAAAGCCGTTTATTTGCGATATTTGTTCGAAATCTTTTAAGAGGCAGAACTCGTTAAGGGCGCACTTGCAGTCGCACAACAGCGAGAAGAAATATGTGTGTGATGAGTGTGGAAAGGCTTTTAAAAAGAACGGAACTTTGGTTGAGCATAAAAAGCATCACTCAGGAGATTTCGCATTTCAGTTTTGCGCCGACGAGAGTAAAATTTTAAGGAAACTAATTTGCATACCATCGATGGCGAAAGTAGTACAAACTCCCGATGAAATTAAGCTCGAAGATTTGAGTGACGATGATGTCTCACTAGAGAGTAGAATGCAGAAACGCAAACCCATCAAACTGAAAATCAAAATGGAAAAGGGAAACGAACCGGGAATCGTAGTAGTAACTAGGCCGAAACGGAAAAAAGCCGTGAAAGACGAAGATTATTGTCCAGACCAGGATGAAAAAGAAGAGAAAATCGAACCGGTTCACTGCGATGCTTGTGATACAACGTTTAGTAACCATTTGAGTTTTGGTTTACATTCGATAACTCACAACGATGAGAATCGATACAGTTGTCACATCTGTTCTTATAGCAGTGCTTCGAAGTACCACTTTGAAATGCATATCAAAGCTCACGAAGGCACAACGGGGTATGATCCAGACGATTTAGTACCAATAATCACCATAAAAGAAGAGAAGCCGAAAAGGAAAGCCAAATCGAAAACGAGAAGGAAACGCAGCGACAAGAATCTCGCGTGTGATGTTTGCTGCAAAGAATTTCGCACGCAAAAGCATTTAAACGATCACTTGGAGAGTCACAACACGTACAACTGTAAAACTTGCGATAAATCCTTCAAGAAAGTCTTGGATTACACGTTGCATCTGAGGACTCATTCCGAAGACGGTTTCTTTCGCTGTATAAATTGCGAATTCAAGACGAAAAACGAAATTGATATAAAAACGCATTTGAGTGAGGAGCACTTGAAGGTTCCGAAATACATTTGCTTCATTTGCAAGAAAGGTTTTAACGTTCACAGTTGGTATGTAGAgcacgctaatttccacaccggcaacaaacccttcgagtgcgaattttgcgataagaagttTTTGTATTCTCGTTACCTAACTAACCACAGAACTAGCGTGCACAGTCAGGAATGCACCGGAGTTGCAGCGATccacgaatgttccatatgcaagaaaacctaccaacacagaaacagtttgaaagttcacatgaattcccacaccggcaacgtctccatttgcgacatttgcggaaagcaactttccagcaaagaaaagttaaaatttcatttacgcatacacacagggtacaaaccgttcaagtgttcatattgtgataaatcgttcacgaagaaaaccataatgattgagcacgagaggattcataccggcgagaaaccctacagctgcagcttctgcgagaagaagttttcacagaggaccagtttggttattcacatgaggaaccacaccggggagaaaccgtacgtttgtcacatttgcactaaaggtttccctgccaaagctatgctaaatatgcattttaaatcttgcaaaggagTTTAA
Protein Sequence
MILQEGGLDRKFSEDPPKPTRKSGIEYRVEEELVKVDTTCGPKVVPKRFVNITQNKEETVTIKTRNGKSIPLLLKSLPVVFKKNIAPVDRITLASERKKPVPKACEQCGKVLFNDSIYRKHLLIHTGKMTCPTCNKVLKNASSLKSHQYTHKGLKYSCEKCDTSFASKKVLAAHIRRHDGDYSHKCELCGKEYYNSKSFNYHMESEHVGIRYTCKICGSVLKSKRNMYQQNIFNPNYGIETMETCDLNIQSKYLLLQPDAALPENNLLDRAVEELNDPDTDLLNLLASEEDCTSILQNIASNEQFESLINNDSDFHAENLENFMDPNYCEKIPYIPNIEQDLIETLPPPEIPTENSCIKPIGEFKCAQCDKVCTSKKMLRYHLKTHSDVRPIVPREDIGIYSKQIQQSQGMFSCPICSKQSDSKKKIKRHLYTHTEERPFLCTQCSKTFKLKSDLSSHNRIVHLHKPDNYSCDLCSKHFKNKSLLTAHQRWHSNEYVEKCDICSRTFFSSGLLSSHIKMTHGGPEVCDICNKTVPVCLPAGIKLTKVMLLNENNENLTEKRSPAVTQINCVKTRSATIREDLLEKISKTGVRIAKIPTKLVSEEKEIKKHGQTKSAAQKKSFVPIRNTTYICVICGDNFPNFDLLNVHMKTPCRVVICSCPFCSKEFKNKSRLNAHISTHKTKPKYPCEKCGKELANTIALQAHMNTMHTEYFDATAIGFKCKLCSLEMPGKPQILNHINSKHLHVSTFLCDICGKSFLQESGLKAHASIHSEEKPFICDICSKSFKRQNSLRAHLQSHNSEKKYVCDECGKAFKKNGTLVEHKKHHSGDFAFQFCADESKILRKLICIPSMAKVVQTPDEIKLEDLSDDDVSLESRMQKRKPIKLKIKMEKGNEPGIVVVTRPKRKKAVKDEDYCPDQDEKEEKIEPVHCDACDTTFSNHLSFGLHSITHNDENRYSCHICSYSSASKYHFEMHIKAHEGTTGYDPDDLVPIITIKEEKPKRKAKSKTRRKRSDKNLACDVCCKEFRTQKHLNDHLESHNTYNCKTCDKSFKKVLDYTLHLRTHSEDGFFRCINCEFKTKNEIDIKTHLSEEHLKVPKYICFICKKGFNVHSWYVEHANFHTGNKPFECEFCDKKFLYSRYLTNHRTSVHSQECTGVAAIHECSICKKTYQHRNSLKVHMNSHTGNVSICDICGKQLSSKEKLKFHLRIHTGYKPFKCSYCDKSFTKKTIMIEHERIHTGEKPYSCSFCEKKFSQRTSLVIHMRNHTGEKPYVCHICTKGFPAKAMLNMHFKSCKGV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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