Patr080777.1
Basic Information
- Insect
- Phosphuga atrata
- Gene Symbol
- Mblk-1
- Assembly
- GCA_944567605.1
- Location
- CALYMX010001718.1:106203-108377[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5e-17 6.6e-14 54.2 0.1 1 44 11 55 11 56 0.94 2 2 7e-18 8.5e-15 57.0 0.0 1 43 361 404 361 406 0.95
Sequence Information
- Coding Sequence
- ATGTCCGCAGTGGCGGGGAGGAGGACCTATACAGAGGAAGAACTTCAGGCCGCCCTGAGAGACATCCAGTCAGGTAAATTGGGCACGAGAAGGGCGGCGGTCATCTACGGGATCCCCAGATCGACGTTACGAAACAAGGTGTACAAGCTCGCGTTGGAGCGGGAGCGGGAATCCCACCTGAACTCAGTCACTGCTCTGAAGATTGACGAGGAGGAAGCCATGGATGACGAGAAGGAGCTGTCCGGGGCTGAGGAGGAGAAGGAGGTTGAGAAGGCTTTGGAGCGGCCGCTGTTGTCGATGGCTGATATCCTGAGGTTTTCTAATTTGGAGAATACGGAGGCCTTGAAGGCGTTGCTGCAGAAGAGCAAAGACGGCCAGGAGTTGTATCCCGGCGTGGAACACAGTGCAATCGGACCTTACATACAGAACTTGATCATGGGCGGAATGATACCGGGCCAGAAAGTAGTCGAAGGTGATGGGAATTTTCCTGAGGTGATGAAGCGGATGATAGCGGAGGAACAGCTGTTGAACGAGCAGCTGAAGAGTCAGAATAACGGCGATGCGGAGAAGATCACGCGGCCGAGTCCCTCGAACTCGGTCATCATGAAGAGCGAGAACAAGAGCAAGTCCGAGTCTGACATGGAGACAGAAGATTCAACCTCGAATGTGATACTGAAAATTCCGTCCTTTAAACCAACCAGTAGTAAAAATGGAGACGCTTACAGAGGTTCAATTGATTCCGGCAGTCTTGTGTCACCACCCGTAACAAGCGAATCCGGTTCCCCACCAATTCTACCCGGCAAAGGCATGACCCTGAAGGACGTCAAGGACGTCATCGCCAAAAGCATCACCCAAAAATTCCAACAAAGTCCAGAACCAATTAGACATCCCATAATAGATATGGATTTTAAACGAGGAGGTTTTACTCCTCCGCTTGGCAGTATATCAGTGATTAAAAACCAAGAACTCAGTCGACCTTACCCTCCTCAACAGCACCAAAAACCTCTACAGAACTCTTCGAGCAGCTCGACGTCGGGAGGAAAAGGAACGAGGCCGAAACGAGGGAAATACAGGAATTACGATAGGGACAGTTTGGTGGAAGCTGTGAGGGCTGTGCAAAGGGGTGAAATGTCGGTACACAGAGCTGGGAGTTACTACGGCGTTCCTCATTCCACTTTGGAGTACAAGGTGAAGGAGCGACATTTGATGCGGCCGAGGAAACGGGATCCTAAACCAAATCCCGTCGATGAGAAGATTGCTTCGTTGAAGCAGAACGATATTAGGAACGCTGCTGTTGCAGCTGATAAGTTAAAGTCGCAGACCATTAAACCGCCTCAAAAGTTTCCACCGACTTCTCCTAACGGGATGAAATTGCCGATTTATGAGAACATGCCTCCAATTGGGTATAATGCAGCGCCGTTTCCTTTTTGGCCTCCTCCTGGCTTCCATCACTTGCCCATGGAGTACGGGAGGTCTTCGACTTCGACGGCGTTTCCGGCTAATCCCGAACAGTTTTTCGCTTCGCAAATGATGCAGAAGTTGCATGAGACTTCGCAGCATGCAAATCCTGGACAAAATCCAGGTGGGTCTTCTCCTGCGTTGGCTAAGAGCGCGAGGCAGATGGCGGAATCGTTGTTGGATGGTGCTGGGACCAATGGGTTTCTGGATGGAATTATAAGATCCAGTTTGGAATCTGGAGTTCCGACGACGGAGGACAAAAAGGAGGATAAGAATGTCGCGCCGGAGAATATGTCGAATAAGGCGCTGCTGGACCAGTTGTGCCGTAACAGTCGGCTGACGCCTTTGACCAAGCCGAGTATGACCGAGAGCAGTTCAGGCGACGAGAGTAAAAAGGGAAGCCCATTGAATTTCAGCACGAACTGCAAGGAGAAAGATGAAGAGAATTCTCACGATGGGTCGGTTGTGGAGAATTCCGACATTCACACGATAGAGTTGTCGAACGACTCGAATGATTCCTCCAAGGCAAACACCGACGACAACGACATGGCGGAAAAGGTGATTCCCCTGCCGCCGACCGGCAGGATCTACTTGAAACACGAACTCACGAAACCTGAAAATCTTAAACCCGAAATGCTTGTTAGATATCTACCAGACGCGGACCGGAACGGCATCACCGAAGGTAGTTGCTCCGAATCTGATGCTGCTCAAGACTGA
- Protein Sequence
- MSAVAGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALERERESHLNSVTALKIDEEEAMDDEKELSGAEEEKEVEKALERPLLSMADILRFSNLENTEALKALLQKSKDGQELYPGVEHSAIGPYIQNLIMGGMIPGQKVVEGDGNFPEVMKRMIAEEQLLNEQLKSQNNGDAEKITRPSPSNSVIMKSENKSKSESDMETEDSTSNVILKIPSFKPTSSKNGDAYRGSIDSGSLVSPPVTSESGSPPILPGKGMTLKDVKDVIAKSITQKFQQSPEPIRHPIIDMDFKRGGFTPPLGSISVIKNQELSRPYPPQQHQKPLQNSSSSSTSGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKQNDIRNAAVAADKLKSQTIKPPQKFPPTSPNGMKLPIYENMPPIGYNAAPFPFWPPPGFHHLPMEYGRSSTSTAFPANPEQFFASQMMQKLHETSQHANPGQNPGGSSPALAKSARQMAESLLDGAGTNGFLDGIIRSSLESGVPTTEDKKEDKNVAPENMSNKALLDQLCRNSRLTPLTKPSMTESSSGDESKKGSPLNFSTNCKEKDEENSHDGSVVENSDIHTIELSNDSNDSSKANTDDNDMAEKVIPLPPTGRIYLKHELTKPENLKPEMLVRYLPDADRNGITEGSCSESDAAQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01400277;
- 90% Identity
- -
- 80% Identity
- -