Patr124480.2
Basic Information
- Insect
- Phosphuga atrata
- Gene Symbol
- kn
- Assembly
- GCA_944567605.1
- Location
- CALYMX010006621.1:89326-106049[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-44 4.5e-40 140.5 0.0 7 120 85 188 80 197 0.92
Sequence Information
- Coding Sequence
- ATGCTGGTTGTTGGGAGGGAACAGTATTTAAAATCCGCCAAGACGCGGTCCGACGAGAATAGTCCGGCGGAGCGCGGTTATCCGACGGCGTCTCCGTGGCCGGCTTTATCTCTTCCGGCTCCAGATCTGGATCCGGTGGCGTGGGGACGTAAGTTATATCCAGCTACGGGTGGGCCAAGAGTGACAGGACCGGGTATCATGTTCGGACTTCACCATCACCAAGACGCCGCGGGGCTGCATCATCACCACCAACCCCGTGGACCGAGTTTAAAAGAAGAACCGATTACCACGACGCGATCGTGGATGCAGACCACCGTTCCCGACCAAACAGGTATTGGCGTAGGTCGAGCCCATTTCGAGAAGCAACCCCCTAGTAATTTGCGGAAATCCAACTTCTTCCATTTCGTCATCGCTTTGTACGATCGAGCTGGTCAGCCCGTCGAGATCGAGAGGACCGCTTTCATCGGATTCATCGAAAAAGATCAGGAAGCTGATGGGCAGAAAACAAATAATGGTATCCAATATAGATTGCAGCTTTTGTACGCGAATGGTAAATGTTTGGAGAAGGTCTCGACGGCCCAAAAGTCCAAACTAAGAAAGCCGCATGGTGTAGCCTTCAGCGTAACCGCAGTATCCTCAGTAGCCGCTAGTTTATCTTATAACAAGCAACCCCTTGGTGTATTCCCGTCGCGCTATAATAGTAGACAGTTAATGATAGGCGGGACTTTCTGTCATGCAAAACGGACGGCTTGA
- Protein Sequence
- MLVVGREQYLKSAKTRSDENSPAERGYPTASPWPALSLPAPDLDPVAWGRKLYPATGGPRVTGPGIMFGLHHHQDAAGLHHHHQPRGPSLKEEPITTTRSWMQTTVPDQTGIGVGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPVEIERTAFIGFIEKDQEADGQKTNNGIQYRLQLLYANGKCLEKVSTAQKSKLRKPHGVAFSVTAVSSVAASLSYNKQPLGVFPSRYNSRQLMIGGTFCHAKRTA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -