Patr054212.2
Basic Information
- Insect
- Phosphuga atrata
- Gene Symbol
- Arid5b
- Assembly
- GCA_944567605.1
- Location
- CALYMX010000970.1:328467-345338[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.9e-25 1e-20 76.7 0.0 2 89 182 267 181 267 0.94 2 2 1.8 3.2e+04 -1.7 0.1 20 38 671 691 661 696 0.73
Sequence Information
- Coding Sequence
- ATGTTCCGGCTTCAAAGCCTGGGTATGGAAAAAATAAGCTACCGTCCTCCACATGGCTGTGGCAAACACATCACAGTAAAAATCTGCCACGAAACCTCCTCTAATAAAAATAAATCGCCGGATCCGTCCGTCATAATCCTAAGCTACCCCCGTTACTGCCGTTACCGTTCAGTGATGAAGCGTCTCGAGGGCGTCGAAGATGAATATTTACGTCACAAAATTGTTAACGCGCTTGGAGGAATTGACGTCCGCTCGGACAACACACGCATCCTTTTCTGCAAAGAAACTTTCGACTACCCAGAATTGGAGGGTCACGAACTCCTCTGCAACCATCTAGCCCCAAAATTGAAGGGCAGACCGCGCGGCAAACGGAAAAAACGCAGCGTCTCTCCAGGATCGGAGAGCAACGAATCAGAATCTTCCGTCTCGAATATTTTCTCAACCGGAAAAAATAAGATTACAACAGAAGGAGGCAGAAACGGGTTACGTTGCGACAGTACCACCTCCCCTCGGCGCAGTACCAGAGCAACAGAAAACTCCGAGAGCAAAGACTTTATTAAAAATCTTACGATGTTTATGAAGAGCAACAGAACCCCTATGGGTCGTATACCTTCCTTAGGCTATAAAGAATTGGATCTACATTCGTTTTACATAAAAGTCCAAAAGTTGGGCGGTTACGATTCCGTCACGGCCAACCGACTTTGGAAATCTATTTTTGACGACCTCAGTGGAAACCAGGCTAGTACCAGTGCAGCTACGGTCATCAGAAGACATTACGAAAGATTTCTATTGGCCTATGAGAGACACTCGAAGGGCGAAGAATATAAGCCTTTGCCAGTGTCAGAACGAAGAAGACTTAAGAGTAAAGCTGGTAGTAGCAGTGCTAGTGATGCTGAGACTAGTGAAAGTACTTCGAGGAGCGGTAATAGCACCCCCATACCGCTTCATATACCAAGTTGTAATACTCCGTCTACGCCTACCGAAAATAAGGAGTTCCATATGAAGATGGAGAGTAAGCCGTCGTCTCTGCGAAGTGTGAGAGTGAAACCGGAAAGATTGCGGGATGCTGCTAAGGATAAAGTGGAGAATTGCGAGGAGGAAGTGAAACATCTGCCGGAAAAGCATCCGGAACCAGCGACGGGTGCAGTGGCGCCCGTGCAGAAAATTGTTCCGGAAAAGTCAACTTCTCCCGCCGAGGGCAAAGAAAACATCCCAATATTTAACGCACGCGATACACAGACTATCGACGATGACGATGACGATCTCATCGAGGTGCCATACAAACCCGAATCACCGGAAATCATCGATTTAGAATCGGAAGTGTATAATACCAGTAGTATGACGAATAATAATAATAACAGTAGTAGTAATAATAATAATACGCAAAGTGCGATTATGGAAGTGAAAAAAGGAAAGTTGGATATTTTAAAGGAGGGTGGTTTAGAGGTTACCCCTGTCAGGCATTTCGCTGTACCGCATACTAAAGAACCAAGAGCTGCTATCATCCACCCTAGTTTAGAAAAACGTCAAATGCCACCTCCTTCTATAAACGCAACTTTAATCAAAAGACCACATTTACCACCAGCTCAAATTAGTCCAAAACCTCCAAAATACCCACAAACATTCACCTACACCCCGTCATCCCCTCCAAAAATCATACAATCAAAGTCTATTTATAACCCTTCACAAAAAACCGTTTACGGAGATCCAAAGGATCTTTTTGCCCACCAAATCCATCAAATTCAATCTCCAAAATTCATACCAAAACCACCAGTAACCGACCTTCTCGACCTTACCGTCCGTTCCCCACAAAAACCAGTCGTAGAAATCATGCGAGTACCCCCATTACCTTGTCCAAAAACCCCTAAAAATATGTATAATATGCCAGCCTTACCTTCCCTCGAAGGTAGAAGAATCAGTTCCAACCTTGAAATAACTCTAGTGGGACCTAGTAGATCCCAAACGATTCCACAACCACCTAAAAAGCGAAATTTACCAGAAATGTACCCTCCAAACAAACTACCCAGAATAGAAGAAAATGGAAGGAAAATGCACCACCACCAACTGTATCCACACACTAGTAAAAAGCATCACAATATCCCAAACCCTTACATAAGACCCCCGACAAAACCCGACAAATCCTTACCCCACCTGTCCCAACTAAACAAATATTCAAACCACCCCATGCCTCCAATGTACCCCAATTACCTAACCCCAACATCAACCGCTACAAACAAACTACCCTTCCCGCCAATGGATCCAGTTTACTACCAAGCGTTACAAAATCTTTACGCCTCGCCAATGAATCCAGTACCACCACCAATGTTCCCGATGTTATCACGAGAAAGATTACTAATGTACAGCCAATTATCTTACTCTTACGGTATGCCACAAGATAACCACCCCACCATCACCTCTTCAGACAACAGTAAAGTTAAAAAACAGTGA
- Protein Sequence
- MFRLQSLGMEKISYRPPHGCGKHITVKICHETSSNKNKSPDPSVIILSYPRYCRYRSVMKRLEGVEDEYLRHKIVNALGGIDVRSDNTRILFCKETFDYPELEGHELLCNHLAPKLKGRPRGKRKKRSVSPGSESNESESSVSNIFSTGKNKITTEGGRNGLRCDSTTSPRRSTRATENSESKDFIKNLTMFMKSNRTPMGRIPSLGYKELDLHSFYIKVQKLGGYDSVTANRLWKSIFDDLSGNQASTSAATVIRRHYERFLLAYERHSKGEEYKPLPVSERRRLKSKAGSSSASDAETSESTSRSGNSTPIPLHIPSCNTPSTPTENKEFHMKMESKPSSLRSVRVKPERLRDAAKDKVENCEEEVKHLPEKHPEPATGAVAPVQKIVPEKSTSPAEGKENIPIFNARDTQTIDDDDDDLIEVPYKPESPEIIDLESEVYNTSSMTNNNNNSSSNNNNTQSAIMEVKKGKLDILKEGGLEVTPVRHFAVPHTKEPRAAIIHPSLEKRQMPPPSINATLIKRPHLPPAQISPKPPKYPQTFTYTPSSPPKIIQSKSIYNPSQKTVYGDPKDLFAHQIHQIQSPKFIPKPPVTDLLDLTVRSPQKPVVEIMRVPPLPCPKTPKNMYNMPALPSLEGRRISSNLEITLVGPSRSQTIPQPPKKRNLPEMYPPNKLPRIEENGRKMHHHQLYPHTSKKHHNIPNPYIRPPTKPDKSLPHLSQLNKYSNHPMPPMYPNYLTPTSTATNKLPFPPMDPVYYQALQNLYASPMNPVPPPMFPMLSRERLLMYSQLSYSYGMPQDNHPTITSSDNSKVKKQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -