Basic Information

Insect: Phortica variegata
Gene Symbol: stc
Assembly: GCA_001014415.1
Location: JXPM01002233.1:8911-14768[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2 1.8e+04 -4.3 1.6 15 19 523 527 522 527 0.81

2 16 0.0043 38 4.4 5.9 4 16 556 569 555 569 0.95

3 16 3.2e-07 0.0028 17.6 11.3 4 19 570 585 570 585 0.97

4 16 1.4 1.2e+04 -3.6 0.9 6 10 611 615 610 615 0.89

5 16 2.7e-06 0.024 14.6 15.3 1 18 621 638 621 639 0.92

6 16 1.3 1.1e+04 -3.5 0.2 8 11 644 647 643 647 0.82

7 16 5e-07 0.0045 17.0 17.3 1 19 679 697 679 697 0.98

8 16 1.3 1.1e+04 -3.5 0.5 5 10 727 732 727 732 0.90

9 16 1.1e-05 0.097 12.7 14.7 4 18 745 759 738 760 0.86

10 16 0.052 4.6e+02 1.0 12.2 1 11 800 810 800 822 0.91

11 16 3.7e-08 0.00033 20.6 14.3 1 18 827 844 827 845 0.94

12 16 2 1.8e+04 -4.4 1.1 6 10 874 878 874 879 0.79

13 16 2 1.8e+04 -4.2 15.1 4 18 882 901 881 902 0.77

14 16 1.1e-06 0.0094 15.9 12.3 1 16 938 953 938 963 0.92

15 16 4.5e-07 0.004 17.1 12.5 1 19 970 989 970 989 0.96

16 16 2 1.8e+04 -5.1 3.9 8 12 1005 1009 998 1009 0.69

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2	1.8e+04	-4.3	1.6	15	19	523	527	522	527	0.81
2	16	0.0043	38	4.4	5.9	4	16	556	569	555	569	0.95
3	16	3.2e-07	0.0028	17.6	11.3	4	19	570	585	570	585	0.97
4	16	1.4	1.2e+04	-3.6	0.9	6	10	611	615	610	615	0.89
5	16	2.7e-06	0.024	14.6	15.3	1	18	621	638	621	639	0.92
6	16	1.3	1.1e+04	-3.5	0.2	8	11	644	647	643	647	0.82
7	16	5e-07	0.0045	17.0	17.3	1	19	679	697	679	697	0.98
8	16	1.3	1.1e+04	-3.5	0.5	5	10	727	732	727	732	0.90
9	16	1.1e-05	0.097	12.7	14.7	4	18	745	759	738	760	0.86
10	16	0.052	4.6e+02	1.0	12.2	1	11	800	810	800	822	0.91
11	16	3.7e-08	0.00033	20.6	14.3	1	18	827	844	827	845	0.94
12	16	2	1.8e+04	-4.4	1.1	6	10	874	878	874	879	0.79
13	16	2	1.8e+04	-4.2	15.1	4	18	882	901	881	902	0.77
14	16	1.1e-06	0.0094	15.9	12.3	1	16	938	953	938	963	0.92
15	16	4.5e-07	0.004	17.1	12.5	1	19	970	989	970	989	0.96
16	16	2	1.8e+04	-5.1	3.9	8	12	1005	1009	998	1009	0.69

Sequence Information

Coding Sequence: ATGTCACATTTATGGCAGGATAGCGGCGACGTCGGCGCTGCGTCGTCATCGGTCGCTAACAATGGCAGTGCCACGGCGCCAGATGTACAGAGACGCGACGCTAATGGCTACTTTTCTAGCAACGGAAATTGTGATTCATACGAAAATTATACAAACGGCAGTAGTACTGTTAGCGCTGGTGGCGTGGCTGAAAATGGTGGCGCTGGCGGCGGCGATGGTGgtagcaacaataactacgttaatttcaatcaattcATACTGCAACACAATTTCGTTGGCAATGCGTCACCGAATGTAATGCAATCGCCCTTATACGAGTATGGCAATCAGGAAAATGCtggttttgtaaattttggcCTAAAACCAGCTGCAACAACTGCCGCAGCTGTGCCGACAACGACAAATTATGCATTTGAGACGCTATTTCCCAAACATAACATATTTCAATATAACAACggcgttggtgttgctgcGTCTGGCACAAGTACAGCAGGCGATACTAAAACGTCAAACAACACACCCAATGATTATGAGCAGCCGACAACGAGTCAAAGTTTCTACAACAACTATTATACGCCCTTTGAGAATATCGGTGGCGTCAACTATTTTGCCAATCCCTTTGCGACTGGTTTTGATGTTTGTGCGGGCACTAATCTGCAAGCGGATGCGCCTGAATTTGTGCCCagttttgcaaaaatgaatttaaatgcaGCAGCACCTAAAGAAACAAAGACCGCCGCTGGTGAGACAGATGGTAGCAAGCCCACAAGCACAGTGGCTTTGATGAATGGCAACGAAGCGTCGGCAANGGCAGCAGCTAAAGAAACGAAGGCCGCCGCTGGTGAGACAGATGCTACTATGACCACAAGCACAGCGGCTTTGATGAATGGCAACGAAGCGTCGGCAAGTGGCTTATCAGCGGCTTCAGCAGTCTTTGAAcctgaaagcaaaaacacattGAATGGCAACCTGGCCAAAACAcaaacgcagcagcagcaacaacaactcaacaacaaTGGCACGGGCGCCATGAGCAAGCAAAACTATCGTGCCGGGCAGAGTTATACGGCTGCAGAGCGTGAACGTGAGCCCAAGGTGAATGGCAGCCGGCAACGTGGTGGCGCTAGCGTCGGCGGCGGTGCAAGGCGCAGTCTGGATTATCGTGACGAGCGCGAAGATCGCTATGGCGAACGCTATGAGAAGAAGCCACAGAAACAGCAACGCTATGACAATCACCGCAGCAACAAACGGCGTGACGATTGGAATCGCAATCGTGATCGCATCAATGGCTTTCGCGTCGATGATCTAGACAACAGCAATGAGAGTCCGTTGCATTCGCCGGAGAAGAAGAGCTCACCGAAGAAGAACGTGATCGAGAATGAGAAGCTGTCACGGCGTGAGAAGCTAATACGTGAAGTAGAAATGCGTCGTTTGGAGTGTTTGGTCTGTGTGGAGACCATCAAGTCACATCAGGGCGTTTGGTCTTGTCAGAATTGCTTTCACATTATGCATCTGAAGTGCATCATAACCTGGGCTTCGTCCTCAAAATCGGAGCTGGGCTGGCGCTGTCCGGCATGTCAGCACGTCTCGAAGGATGTGCCACGTGATTATTACTGTTTCTGCGGCAAGATGAAGAATCCACCGTGTAATCGTCAGGACTTGGCGCATACCTGCGGTGAGGTGTGCTGTCGCGTTGGACGCTGTCCGCATGCCTGTGCATTGCTCTGCCACCCGGGTCCTTGTCCGCCGTGTCAGGCCATGGTGCAGCGCACTTGTGGCTGCGGCAAGTCAAGCAAAACATTACAGTGCGCCATGAAGGAACCCATCGAGTGCGATGAGGTGTGCGAAAAGACGCTAAACTGCGAACAACATCAGTGCAAGGAGAAGTGCCACGAGGGCAAGTGTCCGTCGTGCGAGGAAAAGGTCAATCAGACCTGTCACTGCACCAAGCAGGAGCGACAGGTGGTCTGCACACGTGAAACGCACGACAAGCACGTCTACTCATGCGGCAAACCGTGCGGCCGCGAACTCACATGTGGCAATCACAAGTGCAAAGATTGCTGCCATGCCGGCAGCTGTCGCACCTGTAAAATGAGTCCCACAGTGGTCACATCATGCCCCTGTGGCAAGATGCCGGTGCTAGAAGGTCAACGTAAATCCTGTCTTGATCCAATACCCACTTGTGAGGGCGTCTGTGGCAAAACGTTGCGTTGCGGCAAATCCGTGCATCCACATCAGTGCACCAGCAAATGTCATCTCGGCAATTGTCCGCCGTGCAACAAACAGACTGCCGTCAAGTGTCGTTGCGGTCACATGGATCAGATGATCAAGTGTCGCCAGCTGTCGACGCGCGCCGACGATGCACGCTGCAAGAAACGCTGCACAAAGAAACGTTCATGCGGCAAGCATAAATGCAATCAGGAATGCTGCATCGACATCGATCACATCTGTCCGCTGCCATGCAATTACACATTGTCCtgtaacaaacacaaatgcgaTCAACCATGTCATCGCGGCAATTGTCCGCCCTGTTATCGCTCGTCGTTCGAGGAGCTCTATTGCGAATGCGGCGCCGAGGTGATTATGCCACCCGTAGCCTGCGGCACAAAGCGTCCGCTCTGCAAGAAACCATGTTCACGGCCACACCGCTGTGAGCATCCGCCGCAACATAACTGCCACTCGGGCCCTAGTTGCCCGCCCTGCATGATCTTTACGGTGCAAAGTTGCTTTGGCAATCATGAAACGCGCAAAACCATTCCATGCTCACAGAACAGCTACAGCTGTGGCTTTCCATGCAACACGCCACTGCCATGCGGGCGCCACAAGTGCATCAAGGCATGCCACGAGGGCATTTGCCAGGCGGCCGGCGAGATATGCAAGCAGAGCTGCACGAAGCCGCGTGCACAATGCGGACACAAGTGTCTGGCGATGTGTCATGAGGGCGATTGTCCCGAAACGCCGTGCAAGGAGATGGTGGAAGTACAATGCGAGTGCGGTCATCGCAAGCAGCATCGCGTCTGTCATGAATTGGCACGTGAATTCAGTCGCATTGCCACCGCACAGTTGGCCTCATCGATGGCGGAAATGCAGCGCGGCAATTACATGGAGCTGAGCGAGATACTTGCGCCTGTCAAGCTTAATAAGACTAACAAAACCTTGGACTGCAACGAGGAGTGTCGCCTGATTGAACGCAATCGTCGTCTTGCTATTGGCCTACAGGTGCGCAATCCGGATGCACAGCAACGTCAAACGACCAAATATTCGGAATTTGTGCGCAGCTTTGCCAAACGTAATCCAACGCTTGTCAAATCCGTCTACGATACATTAACAAATCTCGTCAAATTGGCCAAGgagagcaaacaaaagtcgCGTAGTCACTCATTTCCGACAATGAATCGCGAGAAGCGTCAGCTGGTGCATGAGCTTTGCGAGATGTTCAATGTGGATTCAGTGTCCTACGATGCTGAGCCCAATCGTAATGTTGTCGCCACGGCATACAGGGAAAAGGCCTGGTTACCTGCCACAAGCATTATGGAGGTCATACAACGTGAGTCGGGTCAGCGACGTGTGCCTGTGCCCAGCAACAATGCCTGGGGTCTTAAAAAGTAG
Protein Sequence: MSHLWQDSGDVGAASSSVANNGSATAPDVQRRDANGYFSSNGNCDSYENYTNGSSTVSAGGVAENGGAGGGDGGSNNNYVNFNQFILQHNFVGNASPNVMQSPLYEYGNQENAGFVNFGLKPAATTAAAVPTTTNYAFETLFPKHNIFQYNNGVGVAASGTSTAGDTKTSNNTPNDYEQPTTSQSFYNNYYTPFENIGGVNYFANPFATGFDVCAGTNLQADAPEFVPSFAKMNLNAAAPKETKTAAGETDGSKPTSTVALMNGNEASAXAAAKETKAAAGETDATMTTSTAALMNGNEASASGLSAASAVFEPESKNTLNGNLAKTQTQQQQQQLNNNGTGAMSKQNYRAGQSYTAAEREREPKVNGSRQRGGASVGGGARRSLDYRDEREDRYGERYEKKPQKQQRYDNHRSNKRRDDWNRNRDRINGFRVDDLDNSNESPLHSPEKKSSPKKNVIENEKLSRREKLIREVEMRRLECLVCVETIKSHQGVWSCQNCFHIMHLKCIITWASSSKSELGWRCPACQHVSKDVPRDYYCFCGKMKNPPCNRQDLAHTCGEVCCRVGRCPHACALLCHPGPCPPCQAMVQRTCGCGKSSKTLQCAMKEPIECDEVCEKTLNCEQHQCKEKCHEGKCPSCEEKVNQTCHCTKQERQVVCTRETHDKHVYSCGKPCGRELTCGNHKCKDCCHAGSCRTCKMSPTVVTSCPCGKMPVLEGQRKSCLDPIPTCEGVCGKTLRCGKSVHPHQCTSKCHLGNCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCTKKRSCGKHKCNQECCIDIDHICPLPCNYTLSCNKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIMPPVACGTKRPLCKKPCSRPHRCEHPPQHNCHSGPSCPPCMIFTVQSCFGNHETRKTIPCSQNSYSCGFPCNTPLPCGRHKCIKACHEGICQAAGEICKQSCTKPRAQCGHKCLAMCHEGDCPETPCKEMVEVQCECGHRKQHRVCHELAREFSRIATAQLASSMAEMQRGNYMELSEILAPVKLNKTNKTLDCNEECRLIERNRRLAIGLQVRNPDAQQRQTTKYSEFVRSFAKRNPTLVKSVYDTLTNLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEMFNVDSVSYDAEPNRNVVATAYREKAWLPATSIMEVIQRESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01195696;
90% Identity: iTF_01195696;
80% Identity: -