Pvar002533.1
Basic Information
- Insect
- Phortica variegata
- Gene Symbol
- ZMIZ1
- Assembly
- GCA_001014415.1
- Location
- JXPM01003858.1:163-6802[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.24 2.2e+03 -1.5 0.8 3 24 674 695 672 700 0.87 2 2 6.9e-26 6.1e-22 77.1 1.7 1 50 760 809 760 809 0.98
Sequence Information
- Coding Sequence
- atgctACTGCAAGAACATGGAAGTTATCTGTTTCACTCACCGTCAACGTAttctttttcgtttgattacagaaaaaatgatgaaatgaaCCAGCAGGCAGGCTCCTCAAGGGCACCAGCCTTAGGGGGCCAGATATCACCACCAGGCGGTTATAATCCAGCGGCATTggacgcacaacaacaacagcaacaacaacaacagcagcagcaacaattttataatcaacaacaacagcagcaataccaacagcagcaacaacaacaacgcgaaaGTTTTTTGGCCtttcaacaacagcaccaacagcagcagcaacaacaccagcagcagcaacaacaacaacaacagcaacgctcCTATATGAGCAATGAAGTTGGTGACAGTTTACGCAGTCTAAACAACACCTTCGGCCCAAACTCGGAGTTCACAGCGCTCAACAGCACAAACAGCACAAGCAGCATAGCCGGCAGCAGCTCACTGGGCAGCATCGGTGTCAATTCGATTGGCAGTGCGAGCAACGTACTCGGCGGCAACAACGCGGCACAATCGCCGGGCGTGGCTGCTGGCTACCAAAATATGGTAACAGCAAACGGCGCACAACAAACATCGACGACCAACACAATGGACGCTATGGGCGGTTACAGTCAGATGGGCGGCATGCACCCGAACAATAGCATGATGGGCGGCAATGCAAGTGCGCAGGCCTATATGAACGCCAACGGGATGGGCGGCGGCATGTCCAGCATGAATGGTGGCGGCATGAATCCTGCAGCCATGCaggcaaatcaaatgaatCAAATGGGTGGTCACATGAATGGCATGGGCtacaatggcggcggcggacCAGCGCGACATCATCAGATGTCGCCGATGAATCAGATGCAAAGCATGTCTATGGGCGCTGGCGTAATGCCGCCCGGAGCAGGCATGGGCGGTGGCGGTGGAATGCCGCAGCAGCAGATGAACGGTGCGGGGGCAATGAATCCAATGGCTAAGATGCAAGGCATGGCCAATGGCGGTTATCCACAACAGAATCAACGGCGCATGGCACCGTATCCACATCCGCAAATGCATGCGGCACAGAAGCGAGCTGGCATGTATCCTAACGCACAAAATGTTCCTCcacaccagcagcagcacggTATGGGCGGTGGTATGCCGTATGGTCAGCAGATGCATCCTCAAGGAGGCAACGGCGTACCGTTACCCATGCAAGCCGGTGCTGGTGGCAATGGCGGAGCTTATGGTCGCGGCGGTCCTATGGGTGTCGGTGGTGGTTATGGACGTGCGGCAGGCGGTGGATTGGTGCCTGGCGCTATGGGACCCGGTGGTGTTAGCATGGGTCCCGGCCAAGGTATTGGACCAATGGGTCCCGGTGCTGGTGGCGGCATGGGTCCTGGTTGCATGGGTCAACGTTTTATGCCACAAGGTGGACCCGGCGGTGTCGGCGGTTATGGCCCAAATGCTCATCAAGGACAATTTTATCCCAACAGCAATGGCGGCGGCCCAGCTAGCGGCATGGGTGGTGTCAATGGTGTTGGAAGTCAAAGTAGTATTTGCCCGGCTGGTCCGAGCGGTGTCGCGTCTACTGGCAATCCTTATCAGAATCAAGGTTTCCAACAAAACTATCAGCACAGTCCAGTTCCTGGTAATCCAACCCCGCCATTAACACCCGCTTGTAGTGTACCCTACGTCAGTCCGAACCCCGACATAAAACCGCCAATGGATAACAGCGAAGAGATGAGACTGACATTCCCAGTGCGCGATGGCATCATTCTTCCACCGTTCCGTTTGTTACACAATCTCTCCGTCAGCAATCACGTGTTCCACTTGAAACAGAATGTCTACAACACGCTCATGTGTCGCTCTGACCTTGAGCTACAGCTGAAATGCTTCCACCAGGACGATCGACAGATGAACACCAACTGGCCGCACACAGTCACAGTCTCCGCGAACGCAACGCCGCTTAATATTGAGCGCTCTGAGAAGAACGGACAAGCACTGCGGCCGCTCTATTTGAAATCAGTGTGTCAGCCTGGACGTAACACTCTGCAACTGACCGCTAGTTCCTGCTGTTGTtcCCATTTGTTTGTGCTGCAACTAGTCCATCGACCATCAGTGCGACAAGTCCTGCAGAGCTTACACAAGCGCAATCTTCTACCACTCGAACACAGTGTGGCCAAGATCAAACGCAATCTAAGCCTCGGCGCACCAAATGCGGACGGCACCAATCCAACGCCAGGCAATGTCAATAACGATCCGGCGAATCAGTGTGCAAAGATCTCATTGAAGTGTCCGATCACAAAATCTCGAATACGTTTACCGGCTCGTGGTCATGAATGCAAACACGTGCAATGCTTCGATCTTGAAGCTTATCTAATGATCAACAGTGAACGCGGCGCTTGGCGCTGCCCCGAGTGCAAtaAACCAGCGCTCACTGAGAGTCTTGAGATCGACCAATATATCTGGGCTATTCTGAATACATTAGGCAACACCGAAGTCGATGAGGTGGTCATCGATTCGTCAGCTAACTGGCGTGCGCTGCAGCACAACGGCGTCGTCGGGAGCGGTGGCAatgttggtggtggcggcaTGGCTAACGCGTCGAATAACGTGAACGGCAACGGCGGCGTCAATAACGGTGTAACACCCACAGGCCCAATGTCAGCCGGTGGCAATGGCACAAATCCAGGCACGCCTGGCGCTAGTGCACCGAGCAATATGCCCACAATTAAACAAGAACTCTGCGATGATATTGCCAAGGTAATGTCACCGGGCTCTACACAGCTACCGACATGGGACAACTCGCAGGCGATGAGTCCATATACCATGCACGACATGAATTCCATAGCCAGTGGCAATATGATGCAGAGTGGCCAAATTGCTGGCActcgcagcaacaacagtttcgataatttcaacaacaatcaaaatgatGGCTCCATGCCCAACACGGATTCCGTCAACTCATTAGATCATTTTAATGCCATGGAGAAGTCATTGAACGATCAGATGCCACACACGCCGCACACACCCGGCGCAACCAGCCATCCTATGACGCCTGGTGGCCCACCTAGCGTCAGTTCCGCGCACAATGAGCCTATCAGTGGCGGCACaccaaatgcaaacaacagcagcaccggTCACAACTCACCCCAGACACCAGGCACGCCAAGTCGCGGTGGCTTGAATGGCAACGGCAGTGacaaccagcaacaacagcaacagcagcagtccCAACAGTCTCAGCAAGAGCAGATACTTAACTCGCTGATGAATCCACAAACGAATATCAAATTCAGTGACTCTGATCTAAACGCTGAGTTGGGCAATTTCGAAGCTGCCATCAACGATACGGCGCATGATTTGAATCTCCTGCAAGATGTTGATCCAATGGAAATTCTGTCCTACTTGGACCCACAGCCTGATCTGAACACGCCGCCATCAAGCGGctctagcaacaacaacgcaagcGATGATTTGCTCGCAACATTGTTTGATTAA
- Protein Sequence
- MLLQEHGSYLFHSPSTYSFSFDYRKNDEMNQQAGSSRAPALGGQISPPGGYNPAALDAQQQQQQQQQQQQQFYNQQQQQQYQQQQQQQRESFLAFQQQHQQQQQQHQQQQQQQQQQRSYMSNEVGDSLRSLNNTFGPNSEFTALNSTNSTSSIAGSSSLGSIGVNSIGSASNVLGGNNAAQSPGVAAGYQNMVTANGAQQTSTTNTMDAMGGYSQMGGMHPNNSMMGGNASAQAYMNANGMGGGMSSMNGGGMNPAAMQANQMNQMGGHMNGMGYNGGGGPARHHQMSPMNQMQSMSMGAGVMPPGAGMGGGGGMPQQQMNGAGAMNPMAKMQGMANGGYPQQNQRRMAPYPHPQMHAAQKRAGMYPNAQNVPPHQQQHGMGGGMPYGQQMHPQGGNGVPLPMQAGAGGNGGAYGRGGPMGVGGGYGRAAGGGLVPGAMGPGGVSMGPGQGIGPMGPGAGGGMGPGCMGQRFMPQGGPGGVGGYGPNAHQGQFYPNSNGGGPASGMGGVNGVGSQSSICPAGPSGVASTGNPYQNQGFQQNYQHSPVPGNPTPPLTPACSVPYVSPNPDIKPPMDNSEEMRLTFPVRDGIILPPFRLLHNLSVSNHVFHLKQNVYNTLMCRSDLELQLKCFHQDDRQMNTNWPHTVTVSANATPLNIERSEKNGQALRPLYLKSVCQPGRNTLQLTASSCCCSHLFVLQLVHRPSVRQVLQSLHKRNLLPLEHSVAKIKRNLSLGAPNADGTNPTPGNVNNDPANQCAKISLKCPITKSRIRLPARGHECKHVQCFDLEAYLMINSERGAWRCPECNKPALTESLEIDQYIWAILNTLGNTEVDEVVIDSSANWRALQHNGVVGSGGNVGGGGMANASNNVNGNGGVNNGVTPTGPMSAGGNGTNPGTPGASAPSNMPTIKQELCDDIAKVMSPGSTQLPTWDNSQAMSPYTMHDMNSIASGNMMQSGQIAGTRSNNSFDNFNNNQNDGSMPNTDSVNSLDHFNAMEKSLNDQMPHTPHTPGATSHPMTPGGPPSVSSAHNEPISGGTPNANNSSTGHNSPQTPGTPSRGGLNGNGSDNQQQQQQQQSQQSQQEQILNSLMNPQTNIKFSDSDLNAELGNFEAAINDTAHDLNLLQDVDPMEILSYLDPQPDLNTPPSSGSSNNNASDDLLATLFD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01195694;
- 90% Identity
- iTF_01195694;
- 80% Identity
- -