Pvar000763.1
Basic Information
- Insect
- Phortica variegata
- Gene Symbol
- elt-1
- Assembly
- GCA_001014415.1
- Location
- JXPM01006138.1:10700-12412[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.5 3.7e+03 -2.4 0.2 8 17 2 11 2 14 0.80 2 3 4.5 1.1e+04 -3.9 3.8 1 5 31 35 31 52 0.73 3 3 9.1e-18 2.3e-14 52.7 6.9 1 34 83 115 83 117 0.97
Sequence Information
- Coding Sequence
- ATGACAACATCCCACTGGTCTTCATCGCCCTCGATCACCAGCTATGACTCGGCGTCGCTTTGTGCAACAACGGCTTTAACAGACATCAAATGCGAGAATTGCACTTCACAGTTATTGCGTAAAGGCAACGAAGTTTACTGTCCCGTCTGTTGCGGTTCGCCAGTGCGTACCACGGGTCGTATGCCACCgcgtcaagccaagccaaaagcGGCCGCGGCGCCCAACAATCGTCGCACCGGCGTCACATGCGCCAACTGTCAGACCAATTCGACAACGCTTTGGCGTCGCAACAACGAAGGTAATCCAGTGTGTAATGCTTGCGGTCTCTACTTCAAGCTGCACAACATGAATCGACCGCTCTCGATGAAAAAGGATGGCATACAGAAGCGTAAACGGAAACCAAAGAATAATGGCGGCGCGCCGTTACGTGGTGGCCCCTTGCCAAATCTTCGATTCTTTGCAGGCATGGGTCAGAGCGTTGGCCTATTGTATCCCTCGCAGGTGCCCGGCTTATCGATGAATGGACAAGGCGGCACAAGTGCTGAACAATTCCATGAGATGAACGCACAGGCGGTTGCCGTAGCACAatcagccgcagcagcagcagttgccGCCGCATCTTTCGGTCCGGCTGCAGTGGCTGCGCGAAATAGTATaccaacactcacacaaacaacgGACACGTCCGCTGCGGTCGGTTCGCTGAATATGTCACGGCATCATGTCACATCGGAGAGTCATTCACCGTTCAATAATCCGCCCTCGCAGAGTCAATCGCCGCATTTGCCTAACTCGGCAACGCTCAATCGTCAAATCGCGCAATCCGTGCCATCCATTGAGCCAAGCCGTAGCGGCGCCAATGGCGAAATCACCACGAGCGTCATTACACGCACTGGTCTGCCAGAGCGTTCTTCGAATAATTGA
- Protein Sequence
- MTTSHWSSSPSITSYDSASLCATTALTDIKCENCTSQLLRKGNEVYCPVCCGSPVRTTGRMPPRQAKPKAAAAPNNRRTGVTCANCQTNSTTLWRRNNEGNPVCNACGLYFKLHNMNRPLSMKKDGIQKRKRKPKNNGGAPLRGGPLPNLRFFAGMGQSVGLLYPSQVPGLSMNGQGGTSAEQFHEMNAQAVAVAQSAAAAAVAAASFGPAAVAARNSIPTLTQTTDTSAAVGSLNMSRHHVTSESHSPFNNPPSQSQSPHLPNSATLNRQIAQSVPSIEPSRSGANGEITTSVITRTGLPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -