Pvar015262.1
Basic Information
- Insect
- Phortica variegata
- Gene Symbol
- gata4
- Assembly
- GCA_001014415.1
- Location
- JXPM01014256.1:3834-9250[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-17 6e-14 51.3 4.1 1 34 276 308 276 310 0.97 2 2 2.9e-19 7.4e-16 57.4 4.6 1 36 330 364 330 364 0.97
Sequence Information
- Coding Sequence
- agTTCAGTCTATGCTGGACCATTGTTGACATCAGCTCCGAATGGCATGCAATATGGTGGTATGCCTTCGGCCGGTTCACCAACACATGCGCATACAttgcaacaacaccagcagcagcaacagcaacaacatgcacaacatcagcatcaacaacatgcacatcatcatcaccaacagcagcaacaacaagcagcaggCAATAGTCCAAATAGCTTGTTGCACAGTGCAACAAATACATCATCGGCGGCCACAGCGGCTGCCGTTGCTGCGGCAACAACCGCTGCTGCACATGCACTGGCCAACGATGATAATTATGGCTCACCAAAGAGCAATCACAGCGGCGGTGGCACTTTGCCTGCATTCCAGCGCATTGTGCCGGCCAGCAGCGCTttcggcgttggcgttggcgtgtCGAATGGCACAGTCAGCGGCGCTGAACGTGCTGGTTATGCTTCAATGACCAATTATAGAAGTCATAACGATACTTGGCCTGGTCAACATCACTATGAGGCAATTAGTTATGCGTCGAATTCTGCAAATCAATCGCTGTCTGCTGcggctgtcgctgccgctggtGCCACAAATGTGATACGCAATGGTCGTACAGCCGCTGCAGcggcggctgctgttgctgctgctgctgccgctggcAATGGTGGCGTTAATGGTGGCAATGTTTCGGCAACAACAGTTGGCAATGCAACATTGCTTGATGGCACTTCAGCAGAATCAGCGCGTTTAATTGCATCTACTGCGCATTTGTCTGCATCGGCTTCACTTTCAGCAAcattATTCGATGCCGATTTTTTCACTGAGGGGCGAGAATGCGTCAATTGTGGTGCGATTTCAACTCCATTATGGCGGCGCGATAACACGGGACACTATTTATGCAATGCATGCGGTCTCTATAATAAAATGAACGGCATGAATCGACCCTTAATAAAACAGCCTAGAAGATTGAGCGCTTCACGTCGCCTTGGACTCTCCTGCTCGAATTGCCACACGACGCACACATCGCTCTGGCGACGTAATGGTGCCGGCGAGCCGGTCTGCAATGCCTGTGGGctttatttcaaattgcatAATGTTAAGCGACCTTTGACCATGAAGAAGGATACAATACAGACACGCAAACGTAAACCGAAGGGCAGTAAATCGGAGAAATCGAAGAAGGCACGACTTGATGCCGCCaattgtggcaacaacaacaacaacaacagcaaccttGTTGGCAATACTATCGATGCTAATTTGAGCAATATCAGCGATGCAAATAACGACATCAAGCCAAATATCAGCAATATAACgcaacagctgcaacaacatcaccaggtactgcaacaacagcaacagcaacaccaacaacagcaacaacgacaattgaGCACATCATCGTTGACGCACTCGACCGAAAGTTGTTCGCCAGCATCGCATAGCATTGGTTCGCCAACGCAACATTTAAaccatagcaacaacaacaacaatttagcaACAACACTGGAATTGTCGCCAACATCACCATTGGCCTTGTACGCGCAaacgcagcaacagcaacaacaacaacagcagttggGCAATGTTTCGCCAATGCAACATTATCAACAAATGTCGCCAGCAAGTTTGCAACATCATATGTTGCattcaccaacaacaatgtatgcaacagcaacatcatcaacaacaacaacatcaccaacaacaccaaccgCAACATCATCACCAAATCATTTgactaacaataataatattaacaataacaatagcaataacaataataataataataataatcatacatataatcataacaataacaacgatgaTAATCTAAAACTTATGCAGAAATATctacaaattcaacaacaacatcagcaacaagtgaacaacaacagcaacaacaacaacagcagcagcaacagcagcagcagccacaacGAGACAacactacaacagcaacaattattGGCACAACAGCAACTTATACACCTATTGCCGACATCCAATTGCTCAACGaacgtcaacaacagcaacagcagcaacagcatcaaaaCCACAACACCGACCACGGCATCGAGCACATTATCATCGAtgagcatcaacatcaacaattgcaacagcaacagtctgcaaaatcaacagcaacagcagcaacaacacttgcaacatggccaccaacatcaacaacagatACCTTTGTCTAAACTATATTATGATCAAAGTCCGACCACGCCCAAATCACCTGTTTATGGTGGCTATGCTGATCTTGCCGATGTCATTAAACTAGAACATAGCGAATTGCCACAACATATGTCGCTCAGTCGTACTTCATCAATGGATAATGATGACTATGAGATCGCCTatcaacggcaacagcaacaactccaacaacagcaacatcatcagaaCATGCATGAACAACACACATTCGCCATGCATGCTGCTGCCCAGCAACGTTTACATGAACTTGAGCGAAAAATGGTCTTCGATCGTGAGACAGTCGTCAAAATGGAATAG
- Protein Sequence
- SSVYAGPLLTSAPNGMQYGGMPSAGSPTHAHTLQQHQQQQQQQHAQHQHQQHAHHHHQQQQQQAAGNSPNSLLHSATNTSSAATAAAVAAATTAAAHALANDDNYGSPKSNHSGGGTLPAFQRIVPASSAFGVGVGVSNGTVSGAERAGYASMTNYRSHNDTWPGQHHYEAISYASNSANQSLSAAAVAAAGATNVIRNGRTAAAAAAAVAAAAAAGNGGVNGGNVSATTVGNATLLDGTSAESARLIASTAHLSASASLSATLFDADFFTEGRECVNCGAISTPLWRRDNTGHYLCNACGLYNKMNGMNRPLIKQPRRLSASRRLGLSCSNCHTTHTSLWRRNGAGEPVCNACGLYFKLHNVKRPLTMKKDTIQTRKRKPKGSKSEKSKKARLDAANCGNNNNNNSNLVGNTIDANLSNISDANNDIKPNISNITQQLQQHHQVLQQQQQQHQQQQQRQLSTSSLTHSTESCSPASHSIGSPTQHLNHSNNNNNLATTLELSPTSPLALYAQTQQQQQQQQQLGNVSPMQHYQQMSPASLQHHMLHSPTTMYATATSSTTTTSPTTPTATSSPNHLTNNNNINNNNSNNNNNNNNNHTYNHNNNNDDNLKLMQKYLQIQQQHQQQVNNNSNNNNSSSNSSSSHNETTLQQQQLLAQQQLIHLLPTSNCSTNVNNSNSSNSIKTTTPTTASSTLSSMSININNCNSNSLQNQQQQQQQHLQHGHQHQQQIPLSKLYYDQSPTTPKSPVYGGYADLADVIKLEHSELPQHMSLSRTSSMDNDDYEIAYQRQQQQLQQQQHHQNMHEQHTFAMHAAAQQRLHELERKMVFDRETVVKME
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -