Pvar004958.1
Basic Information
- Insect
- Phortica variegata
- Gene Symbol
- CSRNP3
- Assembly
- GCA_001014415.1
- Location
- JXPM01002591.1:20139-25642[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.077 1.4e+03 -1.0 4.5 53 100 229 274 218 289 0.50 2 2 2.7e-95 4.8e-91 304.5 8.5 2 218 379 581 378 581 0.91
Sequence Information
- Coding Sequence
- ATGTTTAGTCcaatcaagaaaatatttacttatatacaaaaaagtgCAAGTGGCAGCAACATGTTTGGTGGTGCAGCATCGACAGTAAATAACATTCAAAAGACAGCAAATCCAAAGGAAACCAATACAGAAACGAACGAAGATATTGTACAGCAAAATGAATCAATAATTTCTGAAGAAACAGTTGCAACATGCGATTCAGAAATTGGTGACTTTGATATTGAGCTCCAGATTAAACCTAGCATTTTAGTAGTCAACAAAcctaaaattaaattggagaaactaaaagaagaaaacgatAAGGAGGACAAACCACTTGATGGAACTAAGATAGTTGTCTCCAAAATATTGCCCGTCGAGCTGGATGATGAGTTGTCCGATTTTGTACAGGGACCACCCGAATTAGGTAATGCTTCCCTAGACGATGATGAGTTAGAAAAGGCGTTCCTTGAGTTAGATGCTTTTGAGGATAAGGAAGTTATTGTATTAAACGAAGACAGTCCGAGTGAACAAATTGTTTCTGATGGTATCTGCGAAGATCCACTAGCTATTGATGATTTCAATCCGCTAGAACATGAATCTGACAATCAACTGGACACGTCATCACTTACAAATGATGAGACAGAGACTGTTAGCACAGATATTATTTGGCTGGACACTCTCGATGGCAGTGAACAGCAGTTGGAGGTAGCTACAATACACAACAGAGAACAAGACCAGCGGGAGCAGAGAAAGTCTGCtctaaaaaaatgcaatgaaagcaGTAATAATCAAAAGGAGGAAACTGCCGAAGAATTGCGCAGTGATGGAGGTTCTGACTCCGGTTTGGGCAGCGAAACATCGACGTTGCAAACCACCATTGGTAGTATTGCGGATTCAAGTCAATTGACAGTAAGCGTTTTAGCAACACCAGATCAAACGCCCTCACAGGCTGCCAAGAAAATTAATGACGAAGAGTTACAAGGCGATGACTTAGATGGAGCTCCAAAAACGGAAGAACCTAAGAAACATCTTCCACTACGTTCTAATTTAAAACGACGCTTAGATGACGTGGAAATTGTCGAAGCAGCTCTAGTGGAAAATAACGAGAAAAGTGGTCAAAGCATTATTGCTGGTGCCCAGACacaaaaacgccaaaaacgATCAATCAACTTTGACGAGGTGCAGGTGTACTATTTTCCACGACAACAAGGATTTGGCTGTGTGCCTACCGTCGGTGGTTGTACATTGGGAATGGGTGCGCGGCACATTGCATTTAAGACTCTCACATTAGCTGAGCATGCTGCAGAACTGCGTCGCGCCCATCGCATGCAAATGCAAGTGGTACAACCGCGTGGCTCTTCCAGCGACGAAACCGAGGAGTCAGAAGAAGATTATCTCAGCGACGGTAGTGGCTCAGATCCAGATGGCGAATCGAATGGTTTCCTGCAACCTGTGCCACCAAAACAACGTCGCGCTTTATTAAAGGCTGCTGGTGTGCGTAAGATTGATGCAAGTGAAAAAAGCGAATGTCGTGATATAAGAAATTCGCGAGAAGTTTGTGGTTGTTCATGTCGCGAATTTTGCGATCCAGAAACTTGCGCTTGCAGCCAAGCAGGTATTAAATGCCAgGTCGATCGCGCAATGTTTCCCTGTGGATGCTCACGAGACGCCTGCGGCAATACAGTCGGTCGCGTTGAATTCAACCCAACACGCGTTCGTACTcattacatacacacaataaTGCGTCTAGACTTagaacaacgtcaacaacaaaaccccACTAATTTAGGTTACATGCTTTCCCCAAATACTGCTGTGAATTCGTCCACAGCAGTTACTGGCAACTATTATAATATGCAACCACAATCAAACTACAGTTCCGGATACGCTTCGCCAGCGTACACACCAGAAACGCCCGCGAActactaccaacaacaacagctacaacagcAAGCACTCCCTTCGGCgctggaacaacaacaaactgtcTATGGGACAATGCAGGATTTGCACACGCCACCTTATCAATTGGATAGCCTGGACTCAAATCTGTTTATTAGCGGTAGTAATGCAACGCCCTCATACGGCGAGCTGCTGCAACCAACGTACCAAAATTTAAGCTTCGGCACCTCAAACAGCGCACAGctTGCCAGTTATGTTCcctaccatcatcatcaaccgACCAATACAGCTGCTTACCTCGATTTAGCGAGGGCACAACCAAGCGGAACATTCAGTTCCTGTGCTGTGCCGTCAGTTCCACCATTCGGAAATGCAACTACAACGTCCGCAACTGCACATTATCACCACCCGAATGCGCTCGAAACCACCGCAACAATTTCGAATGCCGCCACGTCAACGTTCTTGACAACATCGCCAGCATCAGTATCGACGGGTGGCACCGCTGTCAGTAGCATATTGTCATCAAAAACTGCAACAACcaacaatacacaaacacgTGATGGTTTTATAAGCCTGAGCACTCCTAACGCAAGCTCCTCGCGTATATCTCAAATCAATGACTTGTTACATCATAATCGAAATACGACAACTGCACTCATTGCTGTTTCACAATCACCCAGTAATATTGGTTATGCACTGAATCACAGCGGCGTTGGTAACAGCAGTAACTGTAATCACGCAACAAACGACTCTGTAACAACCGCAGATGCTTCCATTGATACGCCACCCATTGAGGACGCACACAAACATTGCCTTGCCTTTGAGCAACTTCCGCCACCGCTCAACAATCCCACACCCATTGTCGCTGTTATGCAACCAACACAACCCTCAACGTCAAAAACTTCTGATACAACGTCACCGCCAGTGTTGCCGCAGTTGCTACCTCCTCCACAAGCCCGACAGCCTATCAATGAGGTTGAGCACAACACACTGAGAACAACAGCATTGCCTGATGGAACTTAA
- Protein Sequence
- MFSPIKKIFTYIQKSASGSNMFGGAASTVNNIQKTANPKETNTETNEDIVQQNESIISEETVATCDSEIGDFDIELQIKPSILVVNKPKIKLEKLKEENDKEDKPLDGTKIVVSKILPVELDDELSDFVQGPPELGNASLDDDELEKAFLELDAFEDKEVIVLNEDSPSEQIVSDGICEDPLAIDDFNPLEHESDNQLDTSSLTNDETETVSTDIIWLDTLDGSEQQLEVATIHNREQDQREQRKSALKKCNESSNNQKEETAEELRSDGGSDSGLGSETSTLQTTIGSIADSSQLTVSVLATPDQTPSQAAKKINDEELQGDDLDGAPKTEEPKKHLPLRSNLKRRLDDVEIVEAALVENNEKSGQSIIAGAQTQKRQKRSINFDEVQVYYFPRQQGFGCVPTVGGCTLGMGARHIAFKTLTLAEHAAELRRAHRMQMQVVQPRGSSSDETEESEEDYLSDGSGSDPDGESNGFLQPVPPKQRRALLKAAGVRKIDASEKSECRDIRNSREVCGCSCREFCDPETCACSQAGIKCQVDRAMFPCGCSRDACGNTVGRVEFNPTRVRTHYIHTIMRLDLEQRQQQNPTNLGYMLSPNTAVNSSTAVTGNYYNMQPQSNYSSGYASPAYTPETPANYYQQQQLQQQALPSALEQQQTVYGTMQDLHTPPYQLDSLDSNLFISGSNATPSYGELLQPTYQNLSFGTSNSAQLASYVPYHHHQPTNTAAYLDLARAQPSGTFSSCAVPSVPPFGNATTTSATAHYHHPNALETTATISNAATSTFLTTSPASVSTGGTAVSSILSSKTATTNNTQTRDGFISLSTPNASSSRISQINDLLHHNRNTTTALIAVSQSPSNIGYALNHSGVGNSSNCNHATNDSVTTADASIDTPPIEDAHKHCLAFEQLPPPLNNPTPIVAVMQPTQPSTSKTSDTTSPPVLPQLLPPPQARQPINEVEHNTLRTTALPDGT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -