Pvar008636.1
Basic Information
- Insect
- Phortica variegata
- Gene Symbol
- CAMTA1
- Assembly
- GCA_001014415.1
- Location
- JXPM01000687.1:40983-47068[-]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.7e-45 2.9e-41 139.8 0.2 10 116 46 150 42 150 0.98 2 3 0.19 3.3e+03 -2.2 0.4 77 98 342 363 334 382 0.66 3 3 0.43 7.7e+03 -3.4 0.8 27 55 497 524 476 568 0.46
Sequence Information
- Coding Sequence
- ATGACATTCGCAAATGTTACGAAATCGAATGCTGCACATCATCATATCGCTGCCGCCTCTGCGTgcgccaacagcagcagcagcagcaatagcatGAGCAGCGATGGCTGTGGCAGCTGCTCACTGTCGCCTGCTACGGAAATCGCCGCGCTGCTTATCAGTTTCGACAAACATAGCGAATGGCAATCAAAAGAAGTCAAAACAAGACCCAAGAGCGGCTCTCTGCTGCTCTACTCACGCAAAAAAGTGCGCTATCGACGCGACGGCTACTGTTGGAAGAAGCGCAAAGATGGCAAAACAACGCGTGAAGATCACATGAAACTAAAAGTACAAGGCACAGAGTGCATCTATGGTTGTTATGTTCATTCGGCGattttgccaacatttcaTCGCAGATGTTATTGGTTATTGCAGaatcCGGATATTGTGCTTGTACATTATTTGAATGTACCGTATCCGGATGATAATAAAATGGCGGTCATTGCGCCGAGCATAACACTTTGGGGTGACAAAAAGGAATGGTCAAAGGAGGAGCTTGTTAGTCAGCTGAAGCCTATGTTATCAACCGTAACTTCAGACGATGACGTTGACTCGGGCAATGATATTGAGATTTCGACCTCTGAAACTGTCGAGTCGATTGTCTGTCAACTTATGGAAAAGCAACGTCTTTCGCGACAGGCAGCACTGGTCAAGCAATTGGATTGCGGTTGTGGCGATGGGAACTGCGCCGATGGTAAGACTTGCACGCATCCAGTAATGCGTCGTACGGGTCACTTGAAAAGCGTTTCAGAGAAGCGTACCGGTCACGGTGAAAGCTTTAACCACGCAACAAGTGGTACACCAAACGTGGTTGTGGCATCCAAGCTCTATTCACGTTGGACTGAGCGACATCGTCATCAACGCGATGCGAATAACATGGACAATCACCACGCTCAGTATCATAATGCAACACAACAATTGTCACAGGAGTCggcaattaaatttcaaatcattccaccacagcaacaacaacaaaaccagcaacaacataatgaTATTGCTGCTTatcatcaacaccaacaacagcagcagcaacaacagcatcagcaacattaTTTCGGTCAGAATAATGTCGCTGTCAATCAaatgttggcaacaaaaaataacttgatcatacaacaacaacaacatcaccagcagcaacagcaacaagctaattacaatcaacagcaacaaaatgctgcTAATCAAATGAATTTACAACGTTATATtgcaaatcaaagcaacaataacaacaacacacaattgGGTCATCGCATGCAAATTGcgaacacaacaataacagcaacaacaactgcaacagcagtGCCaccagtagcagcagcagtaacagaACAGAATAATCCAAAAGTTATGAATGCTGAACTAATTGCAATTCAAAGTCACAATtctacaaattcaaattgtaataaaatcaacCGCAACGCAAATAACtgtagcaacaataataacagcaacactAACCAATTACCGGCAACATCTCAATTgcagcagcaagaacaacaacaacaacgacaaaataaCGATTTAAATGCCGTAAAtaataatggcaacaacaataacaacaacaatttcaactataatcaacaacagcaaataaatatttccaaTACTGCTGCACAACAGCAATACtataaattgcaacaacaacgacaacaggcAACAAACACTcatattgcaacaacagcttcCAATGTCGGCACATCAACGGTTGAACCGATGTGTATGTCACCAGAGCATCAACCCTCTGTTGCACATGCCCCacacagcaacagtaacagcaataataataatgagagtgagaacaataacaacaacaacagcaatggtAATAATACACGCAATCAACCATTGCAAACACACTCAACGCCTTCCACTTCGTCTGCACCATCAACCTCGTCCTCAACGAGTTCCTTGCAGACGATGATTGATATCAAAGCTGTTAAtcaccagcaacagcagcaaccacaacaacaaaccaccACATTGCCAGGTGCTAATTTAATGAATACTGAGGAGGCTGAGACTGGCAGCGTCGGCTTGTGTAAAATGTCATcgtcaaatgaaaatcatcaacagcaacaacaaaatgcttcCAGCGATAGCAATAGTAGCCATCAAGCCAATGAGTATAACAACAAGACTAATGAGAACGGTTGTGCAAGCATTTGTGCTTCCAGCGAGAATAGTCGCACCTCAATTTCCAGCAATGCCAGCGATATTGGCAACGGTCAAGCCAATACGCTTGGCTTCGATGCCATTGAGTTaaccaataataacaatactAGCAAAAAAACATCGACGAACGATTATAGAAACAACGATATGCATGTCCAAAGNTaa
- Protein Sequence
- MTFANVTKSNAAHHHIAAASACANSSSSSNSMSSDGCGSCSLSPATEIAALLISFDKHSEWQSKEVKTRPKSGSLLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVIAPSITLWGDKKEWSKEELVSQLKPMLSTVTSDDDVDSGNDIEISTSETVESIVCQLMEKQRLSRQAALVKQLDCGCGDGNCADGKTCTHPVMRRTGHLKSVSEKRTGHGESFNHATSGTPNVVVASKLYSRWTERHRHQRDANNMDNHHAQYHNATQQLSQESAIKFQIIPPQQQQQNQQQHNDIAAYHQHQQQQQQQQHQQHYFGQNNVAVNQMLATKNNLIIQQQQHHQQQQQQANYNQQQQNAANQMNLQRYIANQSNNNNNTQLGHRMQIANTTITATTTATAVPPVAAAVTEQNNPKVMNAELIAIQSHNSTNSNCNKINRNANNCSNNNNSNTNQLPATSQLQQQEQQQQRQNNDLNAVNNNGNNNNNNNFNYNQQQQINISNTAAQQQYYKLQQQRQQATNTHIATTASNVGTSTVEPMCMSPEHQPSVAHAPHSNSNSNNNNESENNNNNNSNGNNTRNQPLQTHSTPSTSSAPSTSSSTSSLQTMIDIKAVNHQQQQQPQQQTTTLPGANLMNTEEAETGSVGLCKMSSSNENHQQQQQNASSDSNSSHQANEYNNKTNENGCASICASSENSRTSISSNASDIGNGQANTLGFDAIELTNNNNTSKKTSTNDYRNNDMHVQX
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -