Basic Information

Insect: Phortica variegata
Gene Symbol: ct
Assembly: GCA_001014415.1
Location: JXPM01002839.1:10836-33379[-]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 4.3e-27 3.8e-23 81.3 0.0 3 72 551 621 549 626 0.95

2 3 4.3e-32 3.8e-28 97.3 0.0 3 77 991 1066 989 1068 0.96

3 3 9.6e-32 8.5e-28 96.2 0.0 3 77 1237 1312 1235 1314 0.96

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	4.3e-27	3.8e-23	81.3	3	72	551	621	549	626	0.95
2	3	4.3e-32	3.8e-28	97.3	3	77	991	1066	989	1068	0.96
3	3	9.6e-32	8.5e-28	96.2	3	77	1237	1312	1235	1314	0.96

Sequence Information

Coding Sequence: ATTAAAGCACTTTTGGAGGAAGTGCAACGTCTGCGTGCACTCGAACAGACACACATCGTACAAATTCATCGTTTGGAGGAACATTTGGAGGTGAAGCGACAACATATAATGCGCCTTGAAGCGCGTCTCGATAAGCAACAAATCAATGAGGCGCTCGCCGAGGCAACAGCGTTGGctgcagcggcaacagcaacaacaaccgcaacaacaacagcaacagcagcaaccaacacgttattaaacaataacaaaatggcaaTTGAACATGAAAGCATTGGCATTGTCAATGataatgaagatgatgatgacgatgatgatgttatgcatgcacaaaaacaacacagcaatgaacatgatgacaatgatgaggACATTGATAATGAAGTTGGCATGATGATtggcaatgatgataatgatgatgatcatcatcagcacGTTGCTGCAAGACGAAGCGTGCCAACAATTGAGAAAATGTCGATCGATGAACATGATTCCGAGGCTGGCGATAATGATAACGAACacgatgatgatcatgatgagcACGATGATAATGAACATGTGCAAACAAcagccaataacaacaataacaacaacatcattaacaatgataatgatgatattgttgcaacaaatgaTGAAATTGCTGagattaaaatcaaaaaggaaaatcaCAGCCCAATCGATTTGGATGTCATTAGTCAACAATCCGCCTtggccgctgctgccgctgccgctgcggcCGCCGCCTGCGCCAATGatccaaataaatttcaagaattaTTCTTAGAACGGACAAAGGCTTTTGCCGCTGAGGCGCTCAAATGTAGCGcgaacaataacagcaaccaCAGCGAAGATGGCCTAAATCATCatctacaacaacaccaccaccagcagcagcagcaacaacaacaccaccaccaccatacgtcacagcagcaacaacaacaacatcagctacaccatcatcatcagcagccgcagcaacaacaacaacacccgcATTTACATCATCAttcacaacaacatcatcaacaacatcatcataatcTACAAGAACATGATATgaaatcaacgacaacaacagcagcagcaacaacaaattcaacaacatcGCTTGTTGCCAgtggtcaacaacaacaacaacagcaacaacaacaccaccaccagcatcatcatttaacacatcatcagcaacaggaTAATTCGTCCAGCGCTAGCACACCAAATACGCCAGCCGCAGCAAAcgccgccgcagcagcaacagcaacaacaacggacCAATTGGCCGCAACATTATTGGCAAATGGCGgcaaaacaatagcaacaacactcaCCGGCgaagataacaacaacagtctgACACCGAATGCAAATGCCgcggccgctgctgccgccatgGCTGCCCATCATGCCCAACATTTGCCGCCTGGCTTTTTGCCCGCGCTGCCCTTCCCCTTCGCTGCCGCTGCAGCAGCCGGCGCCGCTGCACAGGAACGCGGTCATTTCCGTTTTGCCGATTCGGAATTACAATTGCCGCCGGGCGCCTCAATGGCCGGCCGTTTGGGTGAGTCATTGATACCAAAAGGTGATCCCATGGAGGCGAAATTACAGGAGATGCTACGCTACAACATGGATAAATATGCCAATCAAGCGCTCGATACATTACACATTTCACGGCGTGTACGTGAATTGTTATCCGTGCACAATATCGGACAACGTTTATTTGCCAAATATATCTTGGGTCTGTCGCAGGGCACCGTTTCGGAATTGTTGTCGAAACCGAAGCCATGGGATAAACTAACCGAGAAGGGACGCGACAGTTATCGCAAGATGCATGCCTGGGCGTGTGATGATAATGCTGTCATGCTGCTCAAATCGCTAATACCCAAAAAAGATTCCGGCTTGCCACAATATGCTGGTCGCAATGATGATTCCATGTCTGAGGATCGTATTGCGCATATATTGAATGAAGCATCAACGTTGATGAAGAATTCCGGACCAAATGCATTGCAGGAACAACAACGTCGCTCATCGACATTGGATGAGACGCATAGTAATGATGATTCAAAATCACCGCCACAGACCTGTACATCGCCCTTCTATAAGGAACAattgaaacagcaacaacagcaacagcaacagacacACGaagcattacaacaacagcaacaacatcgttTGCGTCAAGAGGATTTGGTACAAGATAAAATGGCGCGTATCTATCAAGAGATAATGGCACGTGCACCACGTGAAGCCGCCTTCCCAAGttTCCTGCTTTCGCCATTCCTTGGCGCTGCTGGTGGCATGCCCGGCGCTGCGGCCAATGCATTCCCAGCGATGGCGGCCGATGAGAATATACGTTTAGCCTTTGAGCGTGAAATGgctaaattgcaacaacaacaacaacagcagcaacaacaacagccgccaaattttccaaatttttccAGTTTGAtggcattgcaacaacaagtcTTGAATGGCGCACAAGATCTAACATTGACCAAGGATATCAAAGACATTAAAGTGAACGGTCAACGTAACTCATTGGATCATTCACAAAATTCCATGGACGCGACCATGAATGCCATGAAGGAGTCAAATAGCAACAGTGGCGGCCCAACCGGTCTGGGCGGCGATGCCGAACGTCATGGTGTCTTCCCATTGCATGTACGTAAATCCGATGGCGGTTGCCTGACACCGGCACCGCCTGCGCCACCCACAAGTAATGCCTCGGCACAGCACACCAATTCGGCCGCAGCCAGTCCGCTTAGCAATTCCATATTGCCGCCAGCGCTTAGCCAAACGGCAGAGGAATTCGCCGCGACGGCCAGTCCACTCCAACGCATGGCCTCCATAACAAACTCGCTGATAACACAGCCGCCGGTGACGCCGCATCACTCGACGCCGCAACGTCCCACCAAAGCGGTCTTGCCGCcaatcacacaacaacaattcgatATGTTCAACAATCTGAATACCGAGGATATTGTGCGACGCGTCAAGGAGGCGCTCTCACAGTATTCCATCTCACAGCGTCTCTTTGGCGAATCGGTTTTGGGTCTATCACAGGGCTCCGTTTCCGATCTGTTGGCACGTCCAAAGCCTTGGCATATGCTCACGCAGAAGGGACGTGAACCGTTCATACGCATGAAGATGTTCCTCGAGGATGACAATGCGGTACACAAGCTGGTCGCCAGCCAATATAAGATCGCGCCCGAGAAACTGATGCGCACGGGCAGCTACAGCGGCAGTCCGCAGATACCGCAAGGCTTGGCCAATAAGATGCAAGCGGCCGCTTTGCCCATGCAAAAGATGATGAACGAACTGAAATTACAGGAACCGGCACAGGCACAGCACATAATGCAACAGATGCAAGCCGCGGCCGCTATGTCAGCGgccatgcaacaacaacagcaacagcaagtgcagagccaacagcaacatgcTGCGGTACAAGCCGCTCAagcagccgctgccgctgcggcACATCATCAGAATATGTTGTTAACATCGCCCGGTCTGCCGCCACAGCATGCGATTAGTCTGCCAGCGGGCAATGGCGGACCCGGCGGTGCTGGCGGCGTTGGCACTGTGGACAAGAAACCGATGATGATGCCGGTGCATGCATCGCACCAGCCAAATGCCATGCGCAATATGCATCAGCACATGTCGCCCACCGTCTATGAGATGGCTGCACTGACGCAGGATCTCGATACACACGACATCACCACCAAAATCAAGGAGGCGCTGCTCGCCAACAATATCGGTCAGAAGATATTCGGTGAGGCTGTGCTCGGTCTGTCGCAGGGTTCGGTCTCGGAGTTGCTCAGCAAGCCGAAGCCATGGCATATGCTGTCGATAAAGGGTCGTGAGCCGTTCATACGCATGCAGTTGTGGCTCTCGGATTCCAATAATGTCGAACGTCTGCAGGTGCTGAAGAATGAACGACGCGAGGCAAGCAAACGACGCCGTTCCACCGGTCCGAATCAGCAGGATAACAGCTCCGATACATCGAGCAATGATACAAATGATTTCTATACCAGCAGCCCGGGTCCGGGTTCGGTTGGTTCATCGGTAAGCGGCGCACCGCCGAATAAGAAACAACGTGTACTCTTCTCCGAGGAACAAAAGGAAGCGTTACGTTTGGCCTTTGCCCTCGATCCGTATCCAAATGTTGGTACCATTGAATTCCTTGCCAATGAATTGGGCTTGGCAACGCGCACCATCACCAATTGGTTCCACAATCATCGTATGCGTCTCAAGCAACAAGTGCCACATGGCCAGCCCGGCGCCGATAATCCGATACCAAGTCGCGAGAACACCAATGCGACACCATTCGATCCCGTCCAGTTTCGCATATTGCTGCAACAGCGTCTCGTCGAACTGCATAAGGAACGCATGGGCCTAAGCGGCGCACCGATACCCTACCCACCGTACTTCGCTGCCGCCGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCTCGGCCGTAGTCTGGCCGGCATACCCGGCGCTGCTGCGGCCGCTGGTGCTgctgcagcggcggcggctgctgctgGCGCTGGCGAAAATGAGCTACAAGCACTGAATCAAGCCTTCAAAGAGCAAATGAGCGGTCTTGATCTATCAATGTCGACGCTGAAACGTGAACGTACCGACGACTATCAAGACGACATGGATGAGAGTCATGTCAGTGACAATGAATCGCTCNGAACGTACCGACGACTATCAAGACGACATGGACGAGAGTCATGTCAGTGA
Protein Sequence: IKALLEEVQRLRALEQTHIVQIHRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAATATTTATTTATAATNTLLNNNKMAIEHESIGIVNDNEDDDDDDDVMHAQKQHSNEHDDNDEDIDNEVGMMIGNDDNDDDHHQHVAARRSVPTIEKMSIDEHDSEAGDNDNEHDDDHDEHDDNEHVQTTANNNNNNNIINNDNDDIVATNDEIAEIKIKKENHSPIDLDVISQQSALAAAAAAAAAAACANDPNKFQELFLERTKAFAAEALKCSANNNSNHSEDGLNHHLQQHHHQQQQQQQHHHHHTSQQQQQQHQLHHHHQQPQQQQQHPHLHHHSQQHHQQHHHNLQEHDMKSTTTTAAATTNSTTSLVASGQQQQQQQQQHHHQHHHLTHHQQQDNSSSASTPNTPAAANAAAAATATTTDQLAATLLANGGKTIATTLTGEDNNNSLTPNANAAAAAAAMAAHHAQHLPPGFLPALPFPFAAAAAAGAAAQERGHFRFADSELQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRNDDSMSEDRIAHILNEASTLMKNSGPNALQEQQRRSSTLDETHSNDDSKSPPQTCTSPFYKEQLKQQQQQQQQTHEALQQQQQHRLRQEDLVQDKMARIYQEIMARAPREAAFPSFLLSPFLGAAGGMPGAAANAFPAMAADENIRLAFEREMAKLQQQQQQQQQQQPPNFPNFSSLMALQQQVLNGAQDLTLTKDIKDIKVNGQRNSLDHSQNSMDATMNAMKESNSNSGGPTGLGGDAERHGVFPLHVRKSDGGCLTPAPPAPPTSNASAQHTNSAAASPLSNSILPPALSQTAEEFAATASPLQRMASITNSLITQPPVTPHHSTPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLANKMQAAALPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQQQQVQSQQQHAAVQAAQAAAAAAAHHQNMLLTSPGLPPQHAISLPAGNGGPGGAGGVGTVDKKPMMMPVHASHQPNAMRNMHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDSNNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVSGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGQPGADNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAAXXXXXXXXXXXXXXXXLLGRSLAGIPGAAAAAGAAAAAAAAAGAGENELQALNQAFKEQMSGLDLSMSTLKRERTDDYQDDMDESHVSDNESLXTYRRLSRRHGRESCQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01195894;
90% Identity: iTF_01195894;
80% Identity: iTF_01195894;