Pvar007631.1
Basic Information
- Insect
- Phortica variegata
- Gene Symbol
- kn
- Assembly
- GCA_001014415.1
- Location
- JXPM01004388.1:1644-17315[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.8e-06 0.12 10.6 1.1 147 159 1 13 1 14 0.96 2 3 4.1e-142 7.2e-138 460.4 0.0 183 385 14 223 13 226 0.99 3 3 2.9e-08 0.00051 18.4 12.2 422 512 226 317 223 329 0.59
Sequence Information
- Coding Sequence
- ATGTGCAGAGTCCTGCTAACGCATGAAGTGATGTGCAGtttcttcttaaagtttttcttgAAGTGCAACCAAAATTGTCTGAAAAATGCCGGCAATCCCAGAGACATGCGGAGATTTCAGGTTGTAATCTCCACCCAAGTGACTGTCGATGGTCCCTTGTTGGCGATATCGGACAACATGTTCGTGCACAATAACTCGAAGCATGGCCGGCGCGCCAAACGGTTGGATACCACGGAAGGACTCTATCCACCGCTGCCGGTTGCCACGCCCTGCATTAAGGCGATATCGCCGAGCGAAGGTTGGACCACAGGTGGCGCCACAGTGATCATTGTCGGTGACAATTTCTTCGATGGCCTACAGGTCGTTTTCGGTACGATGCTTGTGTGGAGCGAACTGATCACATCTCATGCCATACGCGTGCAGACTCCGCCGCGGCACATACCTGGCGTTGTTGAGGTCACGCTCTCCTACAAGAGCAAACAATTCTGCAAGGGCTCGCCCGGACGCTTTGTCTATGTCTCACTGAATGAGCCCACAATCGATTACGGCTTCCAGCGCTTACAGAAGCTGATTCCACGTCATCCAGGCGATCCCGAGAAGTTACAAAAGGAGATCATACTGAAGCGCGCTGCAGATTTAGTTGAAGCACTCTATTCAATGCCAAGATCACCAGGCGGTTCCACCGGCTTCAACTCGTACGCCGGCCAGCTGGCCGTCAGTGTACAGGACGCAGGGACTGGCCAATGGACGGAGGATGACTATCAGCGCGCACAGTCGAGCAGCGTCAGTCCACGCGGCGGCTACTGTAGCAGCGCCTCGACACCGCACAGCTCCGGCGGTTCGTACGGCGCCACTGCCGTGACTGCGGCTGCTGCCGTAACAGCGAATGGCTATGCGCCCACACCCAACATGGGCACGCTCTCCTCGTCCCCAGGCAGCGTTTTCAACTCGACTTCAAGTAAGTTCTTTTTCACTTCTATTGACATTTTCAAGTTTCAATAA
- Protein Sequence
- MCRVLLTHEVMCSFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVTVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYAGQLAVSVQDAGTGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATAVTAAAAVTANGYAPTPNMGTLSSSPGSVFNSTSSKFFFTSIDIFKFQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01195753;
- 90% Identity
- iTF_01195753;
- 80% Identity
- iTF_01195753;