Pvar009171.1
Basic Information
- Insect
- Phortica variegata
- Gene Symbol
- gt
- Assembly
- GCA_001014415.1
- Location
- JXPM01002833.1:28212-29982[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.3e-12 5.9e-09 35.8 6.8 5 60 425 480 421 483 0.92
Sequence Information
- Coding Sequence
- atgttgatgCACGAGAAACTCATGGCTGGACAATTCTTCGACATTAAAAATGAACCACTGAAAATGGATCTGTACACCGCCTATGCGTATCAGCAACAGCTCGAACAGCAGCTCATCGGCAACGCTGGCCAGgcacacaacagcaacaacaacaccgctgccgccactgctgctgctgctgctgcagagACACCACGCAAAACACCATCACCATATCAGACAAATCTCAGCTATGGCAGCGGCTCACCGATCACAtcgccgacaacaacagctgctaatgctgctgccgccgccgccgctgctgcagtGGTCGCAGCTAATGCAAATGTTAGCGGTACTGCAGCGTCTGTCATACCAGCAAATCTTCTCTACTCAGCACAGGCCGCACAACAGCAGAGCAACACAGGCTTCCCAGCCGGTCTGGCCTCACTTTATCCGGCCTTGTATTACGGCATTAAACAGGAGCCGAAACAGTCGCTCAATGGCACAACTTCGCCACAGCCCATGGCCAATCCGAATGCTGGCAGCGCTGTTACGTCCAACAATGCCACAGCGAGCTTGTTGCAgacatttgctgctgctgccgccgctgctgctgctgctggcaacaacaacaacaacacaagcacaatTGAGCCTGCagccgccgtcgccgtcgccgcctCAGTTGGTGCAACATCACCAGCATTAAACATTGTTGAGCCAAACTCGCCGAGCGCCGCGGCagacagcacaacaacaccaatcgcaacagcaacaacaacacacatagtATTGCCAAATGCTGTCGCCACCACGCCCACCAGCAGCACAGCCATATCGGCTGGCAACGTTCATGGTGCCGCACTCGATGCCAAGAGCACACGTCCCTTCAAGGCTTTTCCACGTGATCCGCTCGTCATAGCGGCAAATTTTGCTGCCACCGATGTGCTGCTCGATAATCCGCGCGCCGAACGTTACACAGAGTATCGCAAGCGTGTACTCGAACAGATACGCAGCTCGAATGGCGGTTCACGTACCGTAACCAATCCAAAGATGCGTCGCACAAATTCACGCAGCGGCAGCGTCAATGAGGGCTCCTCATCAAATAATAATAGCGAAAGTGAGGATCGCGTTGATCGTGCCGAAGAGTCAAGCGATTGTGATTCGAATGCGGGCAATTTCTATAAACTGACAACGCTTGATTCACAAACGGGCgccgccagcaacaacaacagcacaagcGCCAACAATGCTGCAAATATGAGTGGCAGTCAAGTGAAAGATGCCGCTTATTATGAACGTCGTCGCAAGAATAATGCCGCCGCCAAGAAGAGCCGTGATCGTCGTCGCATTAAGGAAGATGAGATTGCCATACGTGCCGCTTACTTGGAGCGACAAAATATCGAATTGCTTTGTCAGATCGATGCGCTCAAGGCGCAACTTGCTGCCTTCCAAGCTAAGGCGAGCGTGTAA
- Protein Sequence
- MLMHEKLMAGQFFDIKNEPLKMDLYTAYAYQQQLEQQLIGNAGQAHNSNNNTAAATAAAAAAETPRKTPSPYQTNLSYGSGSPITSPTTTAANAAAAAAAAAVVAANANVSGTAASVIPANLLYSAQAAQQQSNTGFPAGLASLYPALYYGIKQEPKQSLNGTTSPQPMANPNAGSAVTSNNATASLLQTFAAAAAAAAAAGNNNNNTSTIEPAAAVAVAASVGATSPALNIVEPNSPSAAADSTTTPIATATTTHIVLPNAVATTPTSSTAISAGNVHGAALDAKSTRPFKAFPRDPLVIAANFAATDVLLDNPRAERYTEYRKRVLEQIRSSNGGSRTVTNPKMRRTNSRSGSVNEGSSSNNNSESEDRVDRAEESSDCDSNAGNFYKLTTLDSQTGAASNNNSTSANNAANMSGSQVKDAAYYERRRKNNAAAKKSRDRRRIKEDEIAIRAAYLERQNIELLCQIDALKAQLAAFQAKASV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01195037;
- 90% Identity
- -
- 80% Identity
- -