Pvar015670.1
Basic Information
- Insect
- Phortica variegata
- Gene Symbol
- slbo
- Assembly
- GCA_001014415.1
- Location
- JXPM01005340.1:16099-17601[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.1 3.5e+03 -1.9 0.6 45 54 116 125 110 132 0.46 2 3 2.4e-13 2.6e-10 40.1 13.7 3 63 241 301 240 303 0.95 3 3 8.9 9.8e+03 -3.4 0.2 49 64 304 319 304 320 0.73
Sequence Information
- Coding Sequence
- ATGCTCAACATGGAATCGCCACAGATGTATGACGCCGTGCAGACGCTGTCGCAGCTCGACCTCAAGAAACAGCCGCCGCCACAGCAGGCGACCATCGGTCAGATAACATTGACGGCGATCGTGAACAATCTGCTGCAGAAGCAAATGCTGCAACAGTACACAACACAAACGGACCTCGATGAGCTGACGACGCAAGAGATCACGCTCGATCTGCAGCATCTGATCGACGATCAGTTCCGCGATCCAGAGACGCTTGGCATCTTCAGCGACATGGTCGCGAGTCCGGGCGGTCTGTCGTCCACACTGCCGCCCAACGGCATGGTCAGCGCCGCCGCCAAGGTgctgcagcagcatcaacatcagctgcaacaacagacGCTGCGCACGCAACAGCATGGCGGCTATGGACGCGGCGCGCTCGCCTATATGCCGCAGGCGGTGCATTCGGGCGCCGCTTATAGCAACAATTCCAGCGATGAGAATTCGTCGGTCGGCTCGGACTCGTCCACCATCAAGGAGGAGCCCATCGATCCCGATTATCGGCGTCATTTGCAGGAGGCAAACGCTAATAATGTTGCGGCCGCGGCCTTCATCTCGAATGGCGTTGCTGCTCATCACAATCTACCGCATTTGGCAGCCGGCGCTCATCTGCTCAAGCATCACAACAAACAGTTGCACAACCAGCGCAAAGTCTCGCTCAAGCACGTGGACAAGGGCACCGAGGAGTATCGCCGACGTCGTGAGCGTAACAACATTGCGGTGCGCAAGTCGCGCGAGAAGGCCAAAGTGCGTTCGCGCGAAGTCGAGGAACGCGTCAAGTCACTGCTCAAGGAGAAGGATGCGCTGCTCCGGCAGTTACAGGAAATGACCAATGAGCTGCAGTTGCACAAACAAATCTACATGCNATTGCAGGAGATGACCAACGAGCTGCAGTTGCACAAGCAAATCTACATGCAGCTCATGAACCACACGAATCCTGAAGTGAGTCGCGTCTGTCGCAGTTTCCTCAATACCAACGATCATGGCTTGTAG
- Protein Sequence
- MLNMESPQMYDAVQTLSQLDLKKQPPPQQATIGQITLTAIVNNLLQKQMLQQYTTQTDLDELTTQEITLDLQHLIDDQFRDPETLGIFSDMVASPGGLSSTLPPNGMVSAAAKVLQQHQHQLQQQTLRTQQHGGYGRGALAYMPQAVHSGAAYSNNSSDENSSVGSDSSTIKEEPIDPDYRRHLQEANANNVAAAAFISNGVAAHHNLPHLAAGAHLLKHHNKQLHNQRKVSLKHVDKGTEEYRRRRERNNIAVRKSREKAKVRSREVEERVKSLLKEKDALLRQLQEMTNELQLHKQIYMXLQEMTNELQLHKQIYMQLMNHTNPEVSRVCRSFLNTNDHGL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -