Pvar002831.1
Basic Information
- Insect
- Phortica variegata
- Gene Symbol
- Xbp1_1
- Assembly
- GCA_001014415.1
- Location
- JXPM01018635.1:623-2271[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-15 2.8e-12 46.4 8.3 2 52 78 128 78 134 0.95 2 2 0.0057 6.3 6.9 2.1 36 61 133 158 131 161 0.90
Sequence Information
- Coding Sequence
- ATGGCATCAACTGCTCCAGGAATATTCGTAACAGTGCCCAAGTATGTGGCCACTAATAGCATCAGTCCAACGTTGCCCAAGTTGCGCCCTTCGCCTGTTACCGCCGCTATGCTCAAGGCTGTAGGAGGATCTTCTCCAACGTCCAGCTCTGGCTATGCCTCGTCTAATAGCGGTGCAGAGGATACAGCATCTCCCAAGGGTAAGAAAAGGCGTCTGGATCATCTTACTTGGGAGGAAAAAGTGCAACGGAAGAAACTAAAGAATCGTGTCGCCGCCCAAACATCACGCGATCGAAAAAAGGCACGCATGGAGGAAATGGAATTCGAGATCAAAGATCTAACAGAAAAGACCGAAATACTTCAAAACAAATGCGAAAGCTTACAGGTTATTAATGATTCTCTAAtggcaaagaacaacaaactcGATATGGAAGTTGAACTGTTGCGTCAAGAACTAAacgaaattaaagaaaaacaaaataacagcaTTGCTCAGCCTAGCACTCACTCAGCCGTTGTCCAGTCTTGTGCCGGCTGGTACACCCATGGACACACAGTCGACACACAGCGTGTTGGaacaacagctgcaaaagAGCAACACACTAGCTTCTCTATGGAAGATTGTGGCGCTCTGCCTTCTCTACAAGACATGCTACTCGACATCGAAGACGATGAAGAATTCGATGCAAGAAGGCTTGAAGAGTTGGCCGAAAGTTTGCTCGCCGATATCACAGCAAACATGGAAGCAGGCGCTGGAGCGAGCGATGAAACTGCTGCCCAAACTGCAAGCGACGCAAAGCGATTGCCTGGATCAGTGGTGGGGACCACAGCAGAGTGCATGGAATCCAGCGGAAATAGAAATAATGGGCTGAGAAGCGCCaacagaaaagaagaagcatttaaattacaaaacacaaatgaatGTGTTGCGTTAAAATTAAGTGGAAAAACTACAGTAGCAAGCACAAAATCATCAGTAGCAAAGACAGAATCAACAACAGTAAAACCACCAACATCAGCCGTGCTGACAACGCCGGATACGGTTTATGGCACCTATGATGCCAAATCGAACTCAATCACAATTGTAATGGATGGCGATGCCGTGCCAGTCAACGAGGCCGTCGAAGAGATCTACTGTGAGGGTGCTGCGCTCGCAGAGTCCGAGGCTGTAATCAAATGTCCAACACCGGCAGCATCGCCCTCACAGGTTTTCTTGAATGTTGTCAATGGTGACGACTCAGACGATGAAGAGCATACAGACCTGATGAACTTCGACCCAAttgctaaatttttttctccaaGTCGTAAATTGATTTCGCCATTAGCTAAGTCACCTACGTTATCGCTGCACTCGGTCGCCTCTGATCACGGCTACGAATCCATAATGGGCTCCCCAAAATCGTCTACAAGTGCAACACATTTCGATGGTAGCTTGTTAGACGCGGCGGTAGcctcagcagcagcgacgacaCCAGGCGAGGATGCTTTCGCTTGGGAGAGCAGCCTAAACGAACTCTTTCCCAGTTTGATTTAA
- Protein Sequence
- MASTAPGIFVTVPKYVATNSISPTLPKLRPSPVTAAMLKAVGGSSPTSSSGYASSNSGAEDTASPKGKKRRLDHLTWEEKVQRKKLKNRVAAQTSRDRKKARMEEMEFEIKDLTEKTEILQNKCESLQVINDSLMAKNNKLDMEVELLRQELNEIKEKQNNSIAQPSTHSAVVQSCAGWYTHGHTVDTQRVGTTAAKEQHTSFSMEDCGALPSLQDMLLDIEDDEEFDARRLEELAESLLADITANMEAGAGASDETAAQTASDAKRLPGSVVGTTAECMESSGNRNNGLRSANRKEEAFKLQNTNECVALKLSGKTTVASTKSSVAKTESTTVKPPTSAVLTTPDTVYGTYDAKSNSITIVMDGDAVPVNEAVEEIYCEGAALAESEAVIKCPTPAASPSQVFLNVVNGDDSDDEEHTDLMNFDPIAKFFSPSRKLISPLAKSPTLSLHSVASDHGYESIMGSPKSSTSATHFDGSLLDAAVASAAATTPGEDAFAWESSLNELFPSLI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01195031;
- 90% Identity
- iTF_01195031;
- 80% Identity
- -