Pvar015235.1
Basic Information
- Insect
- Phortica variegata
- Gene Symbol
- cnc
- Assembly
- GCA_001014415.1
- Location
- JXPM01010845.1:4260-18935[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-17 1.8e-14 53.5 8.4 3 64 606 667 604 668 0.95
Sequence Information
- Coding Sequence
- ATGTTACAATCGGCAGCACCACCATATCATCATCACGCCCACCACCCGCATCATGTTGcagcgcatcatcatcatgctgccgccgcagccgctgcgcaccatcaccatcaacGCGCTGCCGCTGCAGCCGTTGGAGGCGTGCAACCGCCGCCGAATTATGCGAGCGTTGGCAGTGGCGCAAATAGCGCATTCCATCGTCAGTCGGGCGGTTTTCATCATGGACACCATCAGGGTCGCATGCCGCTGAGCCGCAGCGTCTCAATGGAACAACGTTTGCAGGATATTGCCACATTCTTTACTCCCATACCGAGCATGGGTGTCGCCGATATGTCACCCTATCCGCACTACCCGAGCCATCATTATTCGTATCAGGGTGCCGCCGCCGCTGGCGCTGCTGCCGCAATGCCCAATCAGCATGCTCAGTACGGCACTGGCGCTGCtgcaccgccgccgccgcctcaTCATGGCCATCATGATTTATTTGCCGGCTCGCAGCCACACTACGGACACAATCTTGGCTCGGCAGTCACTTCAAGCATGCACCTGACCAATGCCACTCATGATCCGGCCGATGCCGTGGGCGCAGCCAGCAATGCCTACAAAATGGAACATGATATGATGTACTATTCGAACGCCTCGTCCGATATGAATCACACAACGGAGGGCTTTATTAATTCGATTCTAAATGATGAAGATTTGCATCTAATGGATATGAGTGATCCTTTCTGTCGTATGGTAGACAACAGCACGAGCAATAATTCATCAGTGTTGGGTTTGCCCAGCAGTGGACATGGTAGTAGCACTGGCACTGGACCAGGTACAGGAGGCAATTCAGTGGCACTATCTATGAGCGGAGCAACGGGCGGCTCAGTTGCCGCGGGCATGACCACAGCGGAATTACTTGTCGGTGGTGGTGCTGGTGGTGGCGCTGGTGGCGCTCAGACCGTTGGTGCCGGCGATCGTTTGGACGCATCCAGTGACAGTGCAGTCAGTTCGATGGGCTCCGAACGTGTGCCATCGCTCTCGGATGGCGAATGGGGTGAGGGCAGTGATTCGGCACAGGATTACCATCAGGGCAAATATGGTGGCGGTGGACCGTATGATTATAGCTACAATAATACGACACGCATTAGCACAATCACACGTCAGCCGCCGGTGGCTCAAAAGAAACATCAAATGTTCGGCAAGCGTTATCAACATGAGCAGACGCCGAGCGCTGGTGGCGGCGCAGGCACGCCCATACCAGCGACACCAGCCGGTGGTGCCGGTGCTGTTGTGCCGCCGACAAGCGCGCAACTGTGCAATGGTGGTGTCCAGCCAACAGTTCAGTCAATCAAATACGAATACGAGCCATATCCAGGCGGTGTGACGGGTCTGCAGCACAATGCAGTTGAGCCCGGCGCCATGGGCGGCGTGCCCGCTTTAGCCACTAAGgaacagcatcagcaacaacagcagccgcagcatCATCACTCATCGCCATACGGCAGCATGGGCGGCGGCTATTCGGTCGATTACTCGGTGCGTCCGCCACGCACGCCACAAGACATGGTGCAGCACAATCACACGTACACTTTGCCGCAGGGCAGCGGCTCACTGCCAAGACCGCAGCAGCGCGACAAGAAAATTGGCGGCGCTGCAAGCAAGAATGGCAAATCGGCCGCTAGCATGGAGGATGAGCATCTGACGCGTGATGAGAAACGTGCGCGCAGTCTTAGCATACCGATTACGGTTAGCGACATCATCAACTTGCCGATGGATGAGTTCAATGAGCGCTTGTCCAAATATGACCTCAATGAGAATCAATTGTCATTGATACGCGACATCCGTCGGCGTGGCAAGAACAAGGTGGCCGCACAGAATTGTCGCAAACGCAAACTCGATCAGATATTGACGCTCGAGGATGAGGTGAATGCGGTGCGCAAGCGCAAGGAACAACTCAACCAGGATCGCGACTTGTTGGCCAATGAACGTCATCGCATATCGACCAAGTTTGCACAATTGCACAAGCATGTGTTCCAATATCTGCGTGATCCTGAGGGTAATCCTTGTTCACCGTCCGACTATAGTCTGCAGCAGGCTGCAGATGGTTCCATTTACTTGCTGCGCCGTGATCACAAAGCCGATGGCGGCAATGCAACTGCTGCCTCTGGCGCTGTGGCTGTGCCCGGCGCTGGTCTAAATCATCACAATGTCAATGGCGCTGTACCGGTGCACGGACACTTGGCAACGACGCAcagtcatcatcaacaacatgcgCTCacacatcagcagcagcagcagcaacaacagacacgtcggcaacagcagcagcagcaacaacaacagcaacaacaacagcagccaacaacagaTATGCATTTTGCCGAATATCAACATCATCCGACGCAGCAAAAGGAATGA
- Protein Sequence
- MLQSAAPPYHHHAHHPHHVAAHHHHAAAAAAAHHHHQRAAAAAVGGVQPPPNYASVGSGANSAFHRQSGGFHHGHHQGRMPLSRSVSMEQRLQDIATFFTPIPSMGVADMSPYPHYPSHHYSYQGAAAAGAAAAMPNQHAQYGTGAAAPPPPPHHGHHDLFAGSQPHYGHNLGSAVTSSMHLTNATHDPADAVGAASNAYKMEHDMMYYSNASSDMNHTTEGFINSILNDEDLHLMDMSDPFCRMVDNSTSNNSSVLGLPSSGHGSSTGTGPGTGGNSVALSMSGATGGSVAAGMTTAELLVGGGAGGGAGGAQTVGAGDRLDASSDSAVSSMGSERVPSLSDGEWGEGSDSAQDYHQGKYGGGGPYDYSYNNTTRISTITRQPPVAQKKHQMFGKRYQHEQTPSAGGGAGTPIPATPAGGAGAVVPPTSAQLCNGGVQPTVQSIKYEYEPYPGGVTGLQHNAVEPGAMGGVPALATKEQHQQQQQPQHHHSSPYGSMGGGYSVDYSVRPPRTPQDMVQHNHTYTLPQGSGSLPRPQQRDKKIGGAASKNGKSAASMEDEHLTRDEKRARSLSIPITVSDIINLPMDEFNERLSKYDLNENQLSLIRDIRRRGKNKVAAQNCRKRKLDQILTLEDEVNAVRKRKEQLNQDRDLLANERHRISTKFAQLHKHVFQYLRDPEGNPCSPSDYSLQQAADGSIYLLRRDHKADGGNATAASGAVAVPGAGLNHHNVNGAVPVHGHLATTHSHHQQHALTHQQQQQQQQTRRQQQQQQQQQQQQQQPTTDMHFAEYQHHPTQQKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01195025;
- 90% Identity
- iTF_01195025;
- 80% Identity
- -