Basic Information

Insect: Phortica okadai
Gene Symbol: -
Assembly: GCA_034638295.1
Location: CM067848.1:14680490-14684265[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.038 3.5 8.6 0.2 1 15 515 529 515 536 0.80

2 8 0.0003 0.028 15.2 1.8 1 23 984 1007 984 1007 0.96

3 8 4.2e-05 0.0039 17.9 1.8 3 23 1030 1050 1029 1050 0.99

4 8 9.5e-06 0.00088 19.9 0.9 1 23 1056 1078 1056 1078 0.97

5 8 6.6e-05 0.0062 17.3 1.0 1 23 1084 1106 1084 1106 0.98

6 8 6.6e-05 0.0061 17.3 1.2 1 23 1112 1134 1112 1134 0.98

7 8 0.0039 0.36 11.7 0.0 3 23 1142 1162 1141 1162 0.96

8 8 0.045 4.2 8.4 0.3 3 21 1170 1188 1168 1189 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.038	3.5	8.6	0.2	1	15	515	529	515	536	0.80
2	8	0.0003	0.028	15.2	1.8	1	23	984	1007	984	1007	0.96
3	8	4.2e-05	0.0039	17.9	1.8	3	23	1030	1050	1029	1050	0.99
4	8	9.5e-06	0.00088	19.9	0.9	1	23	1056	1078	1056	1078	0.97
5	8	6.6e-05	0.0062	17.3	1.0	1	23	1084	1106	1084	1106	0.98
6	8	6.6e-05	0.0061	17.3	1.2	1	23	1112	1134	1112	1134	0.98
7	8	0.0039	0.36	11.7	0.0	3	23	1142	1162	1141	1162	0.96
8	8	0.045	4.2	8.4	0.3	3	21	1170	1188	1168	1189	0.94

Sequence Information

Coding Sequence: ATGACGCATCCGATTTTACTAGCGTCCCCGCAGCGAAGCATAACGGCAACGTCATCATCGGTACCGTCATCAACAGATGAGGTGTATGAGGAGCGCCTGCCTTGCGGTACTGTGTATACATGGAACTGTGCTGGCGAGATGTATGGCATTGAATGTGCACTATGTGAGGAACGACCACTTTGCACACTGACTGAGTTCGCCGACCACATGGAGGTTTGGCACAGATCGTGGTGCAAGCAGATGGATGAAGAACCATTTTCTGGACAAGGCAACGAACTGGCTGATGTGCATGAAGACTTAATGCAGGAAGTGCTAGCAGAGCTGACGGCAACGGGTGAAATCGAATTGATAGCATCACCAGAGGACTTATCGATAATGCCAACTGATgatatgaaagaaaaaaaaatggttgtgATTAACGAGATAGAATGCGAGGAATTAGAGAATGGGAAAGAGATTGAAACTATTGAAGAATCATTGGAGTCGGTGACCCAGGAGAAAGCCACCGTGAGGCTGCAAAGTCAATGCTTTGAGAATATGTGTGGGGACATAGAGTTAAAGATGGACTTAATGGAAGCCAAGGTTAACATTTCGCCGACAGTTGAACCTTTCGAAGAGATCGTCCTTTTCGACAGCCCACAAAAGATTGCTAACCAAGATTTAATTAATGACCACCAAGTTCCAACAAGCCACGAGACGAAAATCATTCTGCCGaacaatgaaaaagaagaagaatgtcTGGAATCAAAACTCCGATTGACGATTAAGTCAATCAATACAGACGTACAAAATCAAGAGCAGAACTTTCAATATGTAAACCAACACAGCGCAAGCGATCAGAAAAAATCGTCCATAAATGATCCAATCTCTGTTGAGAAAAAACTCACCGCAAAACATGTGAGCAAACTAATCGAACTATACAGGGCGCAACCACGACTCTGGAATCAAAGTCACGCCGAGTTTGGTGACACTGAGCTATGCCGCCAATCATGGCAAGCGATTACCAACTCATGGAACAAACACTGCCGTCGCGATTTTACCATCACAGATGTACGAATTCGAGTGTCCACACTGTGTCAACGCTTTATGAAACAGCGCGAACGACTCGAAGCCGAGGGCGAGTTAGACGAGTGCTCCAAATTTCTACACTATGAAAGTCTTACATTCCTCTTTGAACAGCAGACTTTGCAAAATAGACGAAAAATTTTCGAAAGTGAGAATCGCAAGCTAATTACTATTTATAAGCGCTATCCCGTCCTGTGGCACACCGGTCATCGGACAGTACGCTGTCCGAACGAACGTAGTGACGCCTATCGCGCTATTAGCGATGAGCTAAAGGCGATTGGTATTAATCTGACGGCATTCGGCGTACAACGTCGACTGATGTCGCTGCGTAAATGCTATCGACTGGAGAAGATTCGCTACTTACACAGTCTGGTCGACGTCGAACAAAATAGCGTGCATACGACAAACGCAAAAGAATTTGAGAGCGACTTCAAGTTATACCGCGACATGACGTTTCTACATGAGCATATCAATCCGTATGTATGCGCCGGTTGTGGCAAAATTTTCAAGAATTTGGTTACTCATCGAGAGCATGTCAACAATTGGAACAAAAGCTGCTGGCAGGCGTACGATACATGTGATGAGGACGAATTGTCAAAGATAGAAAAACGTACGCAAGAATCGGATGGAATTATAGTGAAAAATCTGCTGCCAGCAACGGTAAATGCGGGATGGCCATTATTGGCtaatgaatattttcaatGCAACATTGCCTGTAGACAAGCTGAAGAAGATGAGAAAACAGTTGTCGAGGTGCCAAACATAACGTTAGGAATGGTACAACCGtcattaacaacaaaacaaacgccGATTACGTTAAGTAACTCTGCGGCGGACCTTGCAGTTTCACAACCAACTGAGAAACCAAAAGACAGATCGTCGGAAATCTTCAATGGCAGCTGCAATGATATTGAGGTCAGTACACAGTTAATTACAGCTGCATTGCCGAAGGCAGAACAACCGGCGGAACTTGTGGTTAAAGTACAATGCGAACAATTATTCACATACAATTTGCACTTACGTGATAACATGTCTGGGAATGAAAAACAACAGTGTGAGGCGCTGGcagaatataaaaatgaaaatattcatATTGGCAACATTGACGCTAGTAAGATCAACACTACTTGTGAAGCGTTAACAGCAACCGCTgataatgaagaagaagacagcaacaataacaattacaacaaagatGACAAGAGCGACGATAGCTTGCCGCACTACTCGCACAATGACCGCCTTAGTGTGCGGTACACTCACAAGCTGATTACTCTGTACAAGGCGCAGCCTACACTTTGGGACCCAAATCACTTGGATTTCCATTCGCGAAAGCAGCGCCGCTTGGCATGGAATGCGCTCACGGCAGAACTAAACAGCAGCTGTCAAACGCGCTACAGCTGGCAGATGCTCCATCGCAAACTAACCGATTTCACCAAATATTACAAGCGCGAGAAACAACGAATCGAGGATCCGCTGGGCGGTTGTacgaaatggtatttttataatgattttcattttctcgACGACGCGCTTGTAGTCAATAACGAATTGCAAAAGACGTTACAACAGCGCGACAACAATCTAAAAATAATTGAAGCCTATAAAGCTCATCCCCAGTTGTGGTGTACCGATCATCCGGATTATTCTAAGCGAAAACAGCGACAGCGCCACATCGATGCAATGTGTACGCGCCTACAAGAAGAATGCAATTTGCAAATAACGCCGGAACGACTCAAGACGCGCCTCATTGATTTCCGGTGCCAGTATCGTCAGGTTAAACAGCAGCGTTTGCGGGCCCTGCATCGCGACGACGCTACAGACTGGAAGCCCCACTATGAATACTACGATGTGTTGAAGTTTCTCGAACACCATGTGTCTCCGTTTACTTGCACGCAATGCAATGAGAGCTTCAAGCGACGTACTGAGTATCTGCTGCACGAGCGCAATGTGCACGAGGAGACACTGAATGGCGTTCTTGAACATCGCGAGTTCAGCAATGATAACTGGGCCCGACAACTTTGTCACATTTGCGGCCAGATGTTTTCAATGCGCAATAATTTGTTGGCCCATCTCAAGCGGCATCTCGGGGAGCGCAAATTCGCCTGCAACACATGCCCCAAAAAATTCTTCAACTCGACGGCATTAAGTGTACATATGCGAAGTCATACCAAGGAGCTGCCCTTTGTATGTGAGCATTGCGCACGCGGCTTTGTCAATGCGAGCAAGCTTAATCAACATGTGAAACGGCATCGCAACCAACGCGATTACAGCTGCAATCGGTGTGACAAAGCTTTTTACACTGCATCTGAACGCGATCGGCACCTACGCAGCCATCTGAATATACGCGACAAAATTTGTCCGATATGCGGACGCGCTTTTGTCGTCGGTTCTGCTTACTATGCTCACCTCAATCTGCATCGTGACAACAAACGTTATGGTTGCGACAATTGCAGCCAGCGCTTCGCACAATATGCGGGCCTATACAAGCATCGCAAGCGTTGTAAACGGAATGAGCAATAG
Protein Sequence: MTHPILLASPQRSITATSSSVPSSTDEVYEERLPCGTVYTWNCAGEMYGIECALCEERPLCTLTEFADHMEVWHRSWCKQMDEEPFSGQGNELADVHEDLMQEVLAELTATGEIELIASPEDLSIMPTDDMKEKKMVVINEIECEELENGKEIETIEESLESVTQEKATVRLQSQCFENMCGDIELKMDLMEAKVNISPTVEPFEEIVLFDSPQKIANQDLINDHQVPTSHETKIILPNNEKEEECLESKLRLTIKSINTDVQNQEQNFQYVNQHSASDQKKSSINDPISVEKKLTAKHVSKLIELYRAQPRLWNQSHAEFGDTELCRQSWQAITNSWNKHCRRDFTITDVRIRVSTLCQRFMKQRERLEAEGELDECSKFLHYESLTFLFEQQTLQNRRKIFESENRKLITIYKRYPVLWHTGHRTVRCPNERSDAYRAISDELKAIGINLTAFGVQRRLMSLRKCYRLEKIRYLHSLVDVEQNSVHTTNAKEFESDFKLYRDMTFLHEHINPYVCAGCGKIFKNLVTHREHVNNWNKSCWQAYDTCDEDELSKIEKRTQESDGIIVKNLLPATVNAGWPLLANEYFQCNIACRQAEEDEKTVVEVPNITLGMVQPSLTTKQTPITLSNSAADLAVSQPTEKPKDRSSEIFNGSCNDIEVSTQLITAALPKAEQPAELVVKVQCEQLFTYNLHLRDNMSGNEKQQCEALAEYKNENIHIGNIDASKINTTCEALTATADNEEEDSNNNNYNKDDKSDDSLPHYSHNDRLSVRYTHKLITLYKAQPTLWDPNHLDFHSRKQRRLAWNALTAELNSSCQTRYSWQMLHRKLTDFTKYYKREKQRIEDPLGGCTKWYFYNDFHFLDDALVVNNELQKTLQQRDNNLKIIEAYKAHPQLWCTDHPDYSKRKQRQRHIDAMCTRLQEECNLQITPERLKTRLIDFRCQYRQVKQQRLRALHRDDATDWKPHYEYYDVLKFLEHHVSPFTCTQCNESFKRRTEYLLHERNVHEETLNGVLEHREFSNDNWARQLCHICGQMFSMRNNLLAHLKRHLGERKFACNTCPKKFFNSTALSVHMRSHTKELPFVCEHCARGFVNASKLNQHVKRHRNQRDYSCNRCDKAFYTASERDRHLRSHLNIRDKICPICGRAFVVGSAYYAHLNLHRDNKRYGCDNCSQRFAQYAGLYKHRKRCKRNEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01196206;
90% Identity: iTF_01196206;
80% Identity: -