Basic Information

Insect: Phortica okadai
Gene Symbol: salm
Assembly: GCA_034638295.1
Location: CM067850.1:11884320-11897723[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 4.8e-06 0.00044 20.9 0.9 1 23 547 569 547 569 0.98

2 7 9.4e-06 0.00088 19.9 2.1 1 23 575 597 575 597 0.98

3 7 0.016 1.5 9.8 1.5 2 23 970 991 969 991 0.98

4 7 6.7e-08 6.3e-06 26.7 0.5 1 23 997 1019 997 1019 0.98

5 7 0.00021 0.019 15.7 2.3 1 23 1029 1051 1029 1051 0.98

6 7 0.027 2.5 9.1 2.9 2 23 1464 1485 1463 1485 0.97

7 7 3.5e-08 3.3e-06 27.6 1.4 1 23 1491 1513 1491 1513 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	4.8e-06	0.00044	20.9	0.9	1	23	547	569	547	569	0.98
2	7	9.4e-06	0.00088	19.9	2.1	1	23	575	597	575	597	0.98
3	7	0.016	1.5	9.8	1.5	2	23	970	991	969	991	0.98
4	7	6.7e-08	6.3e-06	26.7	0.5	1	23	997	1019	997	1019	0.98
5	7	0.00021	0.019	15.7	2.3	1	23	1029	1051	1029	1051	0.98
6	7	0.027	2.5	9.1	2.9	2	23	1464	1485	1463	1485	0.97
7	7	3.5e-08	3.3e-06	27.6	1.4	1	23	1491	1513	1491	1513	0.99

Sequence Information

Coding Sequence: ATGCAAAATCATTTATCAACTGTTTTGTGTGCGATGCGTAGTGACTTTAAAGATAATCACCAGGAGACCATCAATAAAATGATACAATTTGGCACCGTTAAGTATGGCATCGTTAAACAACTGAAGGATCGTGCCAGGAGCACGGAATTGGATGCAGCGGGCAGCGATCAGGAGGAGAATGGTGCCTGCTCACCGATTGCGGCCACGGGCAGCGCAAGTGCCGCCAGTAGTCCACAGCATGAGAGCGCTGAtggcacaataacaacagcaacaacaacaacatcgacaacAGCTGAGGTGAGCAGTCGCAGTACGCCAGCCAAAACGCCCACAGAAGCAGCCATGGAGATCGCTGGTGGCGATGTTGATGTAGCCGGCGACATTGAAGAGCATGATGAGATCGAAGAAGCGGGCAGCGTTGAAGATCATaaacataataacaacaataataacaataataatatcatATCAAAAGTTGATTCATTTGCCGAAACGGAGGCAGCAAATAATGACGTTGATGATGAGTTTGAAGTGAGCAGAAACCTTGCTGCAGCAGCTGAACACAAAGCGGCGCAAGTTGAAGGTGCTGCTCTAGTGAAAGATGAAGATGAGGAGGAGGAGGaagatacacaaacacaacaacattgCAAATCGCCAAAGTCACAAAAAGCGCTTAATTCACGCGCATCAACACCAAAGCACGACGAAGATGTCGACATGACTGAAGCTCCAGCAACGGCATCAGCAgtagcggcggcagcagcgacGTCAGCCGAGTTGACCGCGGCAAAGACGTTAACGCCGCCATCGAATAGCGCTGCATTGGCTGGCTTGCCGGCCGGTTTGCCTCCACAATTTGGCGCGACGCCTGTGACTCTGGAGGCGATACAGAATATGCAGATGGCAATTGCACAATTTGCCGCCAAGACAATCGCGGATGGCGCTAGTGGCGCTGACAATGAGGCAGCCATGAAGCAACTGGCCTTCCTGCAACAAACACTCTTCaatctacaacaacagcaacttttCCAAATACAACTCATTCAACAGCTGCAATCACAGCTGGCCATGAATCAGACAAAGAGTCATGATGGCACCGTTGAAATGGATGAGGACGATGAGGATGAAGAGCGTGAAGATGGTGAGGAGGATACATATGAGGAAGAAGAACGCATAGCACAGTTGGAGTTACGTCAGAAGGCAGAAGCACGCATGGCAGAGGCCAAGGCACGTCAGCATCTAATCAATGCCGGCGTACCAGAGACGGGCGTTGTTGAGTCACTGAAACGTAAGCGTGAGGCTGAAGATGCCGCAACATCATCGTCGACATCGTCAACACTTGAACCTGCCAGCCGCCGCATGAGCTTGGAGGCAAAGTCAAGCTCAGCTGCCGATTCGCTTGCCAAGCTCAAGGAGATGGAAAATATGCCATTGCCTTATGGCTCCGATTTAGCATCGAGCATCATAACGAATCACGATGATTTGCCTGAGCCGAACTCACTCGACCTGCTACAGAAGCGTGCACAAGAAGTGCTCGACTCGGCATCACAGGGTATATTGGCGAACAACATGGCCGATGAGTTTGCTTTTAATGATAAGAACGGTGAGGGCAAGAATCGCAACGAACCTTTCTTCAAGCATCGTTGTCGCTACTGTGGCAAAGTGTTTGGCTCAGACTCGGCTCTGCAGATACACATACGATCCCACACGGGTGAGCGTCCCTTCAAGTGCAACGTCTGCGGCAGCCGTTTCACGACAAAGGGCAACCTGAAGGTGCATTTCCAACGTCATGCTCAGAAATTTCCACACGTACCAATGAACGCCACACCAATACCGGAGCATATGGATAAATTCCATCCGCCATTGCTGGATCAAATGTCGCCTGATAGCTCGCCGACACATTCACCCGCCGCAATGCCACAACAGATGCCGTCAGTGTCTTTGCCGTTGTCCTTCCCGCCTGGCGCTAGTTTTCCCGGTCTCTACCGACCGCCCATGGACATACTGAAGTCATTGGGTGCAGCTGCAGCGGCCGCTGGTGGCGCCAGTAATGCTTTGCCAAATCCGTTTTTCCCCCAATTACCCGCCGGATTGAGTGACAGCAACGCTGTTGCCGCAGCAGCTGTGCAGGCACAAGCTGCAGCGCAGGCCGCTCTCAAGCAACATAACAATCAGGAAATGTCCACAGATCTGCGTAAGTCATCGGCCCCAAGTTCGCCTGAACTGACGACAGCGCCAGTAAAAAGTGAACCCGTCGAAgagaaagaagaacaagagCCGGAGCCGCGTGATCATGCACATGAACATGTTAGCGCTGAGCCAGAGGCAAGCGTAAACGAAAGTCTACCACTTGAGGTGAAAATCAAAGAAGAACGCATGGAAGAAGAGCCGGAACAAGCTGAGGATTTGGCACGACCAGATTCGAGAGAGCACATTACTGCATCTTCGCCCACACCTGAACCAGTCTCACTGGCTACGAGTCATTCGAGCAGTGTACGTTCTCCGGCAACACCCACGAGTAAAGCTGCACTACCGCCAGTGGTACAGCCAGTGCAACCACCAGCAATCTTGCATCCCCATCCCTCTCCAGGGTCGCAGCACCATTTTGATCATTTACCCACACCTGGTCAGCTGCCTCCCTCCATGCATCATCGCGAAGATTTCTTTGCTGAACGTTTTCCCTTGAATTTTACTAAGACGCTTTCGCCGGAGCGCAACTCACCGATACGTTCGCCCGCACACATTCCCCGCTCACCATTCTTCAATCCCATCAAACATGACCTTGCGCTACTACCACGCCCACACAGCAACGACAACTCGTGGGAGAACTTCATTGAGGTCTCAAACACATCGGAAACAATGAAACTGAAGGAGTTGATGAAGAACAAGAAGATCACGGATCCGAATCAGTGTGTTGTCTGCGATCGCGTGCTTTCATGTAAGAGCGCTTTGCAGATGCACTATCGCACGCACACCGGAGAGCGTCCATTCAAGTGCCGCATTTGCGGACGTGCCTTCACCACAAAGGGCAACCTCAAGACCCACATGGCCGTGCACAAGATACGCCCGCCAATGCGTAACTTCCATCAGTGTCCGGTGTGCCACAAGAAGTACTCGAATGCGCTCGTGCTGCAGCAGCACATACGCCTGCACACAGGCGAGCCAACGGATCTGACGCCAGAGCAGATTCAGGCCGCCGAAATACGTGATCCACCGCGCGCCATGATGCCTGGTCCGTTCATGAATCCATTCGCAGCTGCGGCATTCCATTTCGGTGCTATGCCAGGTGCTGGTCCCGGTATGCCAGGTGGTCACGGCATGGGCCCTGGCGGTCCACACAACGGCACGCTTGGCTCGGAGTCGTCTCAAGGTGACATGGATGAGAATATCGATTGCGGCGATGATTATGACGATGACATATCCTCGGAGCACATGTCGAATAGCAACGACCAGGATGTCAATGAGCGTCCACGTTCAGGTGATGATTTTAAGGGTTTGCTCTTCGAGCAGAAGTTGCGCATTGATTCGGCAGGCGTCGTGAACACAACACCGCGACCGCGCTCTGCGGCTAGCAATGCCAACTCAATGAATTCTGCGCCCACAAGTCCAACTTCGCAGCCCAAAATGAGTTCGACGCGCGCCAGTTCACCGGCTCGCTCCGCGTCAGAGGCTTCCCAAGGCGCACTCGATCTCACACCACGTGCAACGGCAGCCACGGCCTCGGCGCCTACAGCGCACGGCAGCGCCAATGCCCGTTCGCCGCAACCCACCAACGCAACCGTCGATAAGAAAGCCAGCACACCACCGACGCATAATCCACCCGCCAAGAGTCCCCACCACCATCAACACCATCACCACTCCTCATCGGCGCCAAAGCTCAGTCCCTCCACGCTTTTGCCCTCGCCGCTTCCACCCACCGTTGGTCTTGATTGCCTACCGCCCGGCCTGCAACATCatctgcagcagcaacatcaacagctaATGCAACAGCAGGCGGCCGTCGCCGCAGCAGCCCAGCATCATCAGCAGATGCAGCAACATGCCGCCGCACTTCACCACGAACACTTGCGACGCGAAGCAGCCGCCGAGGCGCATCACAAAGCGGTCacgcaacatcatcaacatcaacaattgTCGCCTTCGCATCCGCCATCACAGCAACAAGGTACACCACCAACGTCGACACCCACACAAGTCGGcgcgccaccaccaccaccgcccaATCCTCTGCTCGCGGCACGTCCACCTTTCGGTATGTTCCCGAATCTGCCGCTCTTTCCGCCATCGACTGCGCAGAATATGTGCAACGCCATGAATCAGATTGCACAGTCAGTGATGCCAGCGGCGCCTTTCAATCCGCTCGCGCTGTCCGGCGTACGTGGCAGCACCACGTGCGGCATCTGCTACAAGACATTCCCCTGCCACTCGGCGCTCGAGATACACTATCGCAGCCATACGAAGGAGCGACCCTTCAAGTGCACCATCTGCGATCGCGGCTTTACGACCAAGGGCAATCTCAAGCAGCACATGTTAACGCACAAGATACGTGACATGGAGCAGGAAACTTTCCGGAATCGTGCCGTAAAGTATATGAACGATTGGCCAGAGTAA
Protein Sequence: MQNHLSTVLCAMRSDFKDNHQETINKMIQFGTVKYGIVKQLKDRARSTELDAAGSDQEENGACSPIAATGSASAASSPQHESADGTITTATTTTSTTAEVSSRSTPAKTPTEAAMEIAGGDVDVAGDIEEHDEIEEAGSVEDHKHNNNNNNNNNIISKVDSFAETEAANNDVDDEFEVSRNLAAAAEHKAAQVEGAALVKDEDEEEEEDTQTQQHCKSPKSQKALNSRASTPKHDEDVDMTEAPATASAVAAAAATSAELTAAKTLTPPSNSAALAGLPAGLPPQFGATPVTLEAIQNMQMAIAQFAAKTIADGASGADNEAAMKQLAFLQQTLFNLQQQQLFQIQLIQQLQSQLAMNQTKSHDGTVEMDEDDEDEEREDGEEDTYEEEERIAQLELRQKAEARMAEAKARQHLINAGVPETGVVESLKRKREAEDAATSSSTSSTLEPASRRMSLEAKSSSAADSLAKLKEMENMPLPYGSDLASSIITNHDDLPEPNSLDLLQKRAQEVLDSASQGILANNMADEFAFNDKNGEGKNRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHAQKFPHVPMNATPIPEHMDKFHPPLLDQMSPDSSPTHSPAAMPQQMPSVSLPLSFPPGASFPGLYRPPMDILKSLGAAAAAAGGASNALPNPFFPQLPAGLSDSNAVAAAAVQAQAAAQAALKQHNNQEMSTDLRKSSAPSSPELTTAPVKSEPVEEKEEQEPEPRDHAHEHVSAEPEASVNESLPLEVKIKEERMEEEPEQAEDLARPDSREHITASSPTPEPVSLATSHSSSVRSPATPTSKAALPPVVQPVQPPAILHPHPSPGSQHHFDHLPTPGQLPPSMHHREDFFAERFPLNFTKTLSPERNSPIRSPAHIPRSPFFNPIKHDLALLPRPHSNDNSWENFIEVSNTSETMKLKELMKNKKITDPNQCVVCDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKYSNALVLQQHIRLHTGEPTDLTPEQIQAAEIRDPPRAMMPGPFMNPFAAAAFHFGAMPGAGPGMPGGHGMGPGGPHNGTLGSESSQGDMDENIDCGDDYDDDISSEHMSNSNDQDVNERPRSGDDFKGLLFEQKLRIDSAGVVNTTPRPRSAASNANSMNSAPTSPTSQPKMSSTRASSPARSASEASQGALDLTPRATAATASAPTAHGSANARSPQPTNATVDKKASTPPTHNPPAKSPHHHQHHHHSSSAPKLSPSTLLPSPLPPTVGLDCLPPGLQHHLQQQHQQLMQQQAAVAAAAQHHQQMQQHAAALHHEHLRREAAAEAHHKAVTQHHQHQQLSPSHPPSQQQGTPPTSTPTQVGAPPPPPPNPLLAARPPFGMFPNLPLFPPSTAQNMCNAMNQIAQSVMPAAPFNPLALSGVRGSTTCGICYKTFPCHSALEIHYRSHTKERPFKCTICDRGFTTKGNLKQHMLTHKIRDMEQETFRNRAVKYMNDWPE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -