Basic Information

Insect: Phortica okadai
Gene Symbol: salm
Assembly: GCA_034638295.1
Location: CM067850.1:11974721-11982936[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 2.5e-06 0.00023 21.8 1.7 1 23 403 425 403 425 0.98

2 8 2.8e-06 0.00026 21.6 1.7 1 23 431 453 431 453 0.98

3 8 2.4 2.2e+02 2.9 2.4 5 23 727 745 724 745 0.84

4 8 3.6e-08 3.4e-06 27.5 0.2 1 23 751 773 751 773 0.98

5 8 0.0011 0.1 13.5 0.9 1 23 783 805 783 805 0.98

6 8 0.013 1.2 10.1 0.4 1 23 1010 1033 1010 1033 0.95

7 8 1.2e-05 0.0011 19.6 5.0 1 23 1225 1247 1225 1247 0.96

8 8 9.4e-08 8.7e-06 26.2 0.7 1 23 1253 1275 1253 1275 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	2.5e-06	0.00023	21.8	1.7	1	23	403	425	403	425	0.98
2	8	2.8e-06	0.00026	21.6	1.7	1	23	431	453	431	453	0.98
3	8	2.4	2.2e+02	2.9	2.4	5	23	727	745	724	745	0.84
4	8	3.6e-08	3.4e-06	27.5	0.2	1	23	751	773	751	773	0.98
5	8	0.0011	0.1	13.5	0.9	1	23	783	805	783	805	0.98
6	8	0.013	1.2	10.1	0.4	1	23	1010	1033	1010	1033	0.95
7	8	1.2e-05	0.0011	19.6	5.0	1	23	1225	1247	1225	1247	0.96
8	8	9.4e-08	8.7e-06	26.2	0.7	1	23	1253	1275	1253	1275	0.98

Sequence Information

Coding Sequence: ATGTGTTCAATATTTCATAATCGCATTAATTATCGTGGACCGCGTAGCAGTTCGAACGGCAGCAGTAACGATGGCGGTGATGCCAGTGTGTCTGTCTTGGCCAAAGAATTGGATGCCGATCGCAATAACAATGGCAGCAATGCCGAGGAGGACAATCTGCCGGCTGAGAAAGAGAGTGTTGCAGATACAAATACAGCAGATACAATGCGTAATAAAATGTCGGCAAGAACACCGAGCAATGGTGAACGACCGGAGTTGGATGAGCTTGAGGAAGACGAAGATGAGGATGTGGCGGTGGCGTCAGCGTCGGCGTCGAGTCAAGCTGAAATGGCAGCGGAAGAGGATGAGAATGAGAATAGCAATGAAGCGCTTGATCTGTCGGTGATCTCCGGCCGTTTGCCGCACAGCGGACACGTTGCATTAGAAGCTTTACAACATACCAAAGTGGCGGTGGCACAGTTTGCGGCAACCGCGCTGGCGAACAGTCATCATTATTATGGCGCGGACACGGGACCGGGTGCAAGTGAAATGGCCATGGTGCAATCGACGATATTCAATGTGCAGCGGCAGCATATTATGCAACTGCAGCTAATACAACATCTACAGAGTCAATTGAAGCGTGCGGGTAATAGTTTAGTAAGGCGCGAAGAGGACGGCGAGGAGGAAGCTGAGCCGGAGGCTGAAATAGAAATGGAGCGGGAACAGCAAGCTGAGCAAACTGAGCATAGTGTGAAATGTGAACGTGAGCTAGATGCGAGTCCAAGTGACAAGGCGCAAATAATGCGTGAGTCAGAGGAATATGTGAAGCCAATGCGAAGaacagatgatgatgatgagcttGCCAAGAAATCGACTGTAGAGAAGCAGAACTTAAAGACTGATAGTAGAAGAGAAACTGAATTGGATGAGTGCAATCGTAGTGGAACAAAACAGGatacaaacagcaacagcaacaacaacaacaatagcagcaacCGAAACAGTTATCAGCCGCTCATGTGCGATATAAGCTCAACGTTGGCCTCGACCATTATAACGAATCATGATCCGCCACCGGCGCCCAATGAGCCGAACTGTTTGGAAATGTTGCAGCGCCGCACGGAGGAGGTGCTCGACTCGGCATCGCAGAGTTTGCATGCCTCCCAGTTGCAGGATGAATACGAGTATACGCAAAAGGATGCCCAGGGACGCGGTGAGATCTTCAAGCATCGCTGCAAGTATTGCGGCAAGATTTTTGGCTCCTATTCGGCATTGCAGATACATTTGCGTTCGCATACCGGTGAGCGTCCGTTTCAGTGCAATGTCTGTGGCAGTAAGTTCACCACGAAGGGCAATCTGAAGGTGCATTACCAACGACACACACAGATCTTTCCGCCAATGTTATTGCCACCGGGTGTCAATGGTGGCATGCAGGCTGAACATTATGCCGGCTATCCCGGCAATGGCATTGTgccaccaccgccaccgccgccgccaccaccacctccTCCGCCATCAGCAGCCATGTCGACGGCCGTAAGATATGAACCGCGGCCAACAACGCCAGCACAGAATTTTATTAAGGATCTGAGCGTGCGGGAAGCGGAAGAAGCAATTGTGGATGATGAGCCAACGCAGGAAGACGAATCAGTCGGTGCTGCGAATGCGTTGAAAGCAACACAAGCGGCCGAGTCAAATAGTCAACAAGCCGAAGATCTCAGTAAGCCAACGCTGCCATTGCCAGCGCCAACTTCAAATGCAACGACTAGAGAAAGCACACCTGAGCGTCTGTCAGCGAAGTCGCCCAAGACGACAGCCAACATACACGAGAAAACCGAAAAGCCCATGACATCACCCGCGCCCAAACGCAATGGCAGCGTACGCAAGCGTCACTCAAGCGCTGGCACGCCACCGAGCGAGGCCAAGAAGCAAGCGCCACCGCCACCACTGTCGCATATCAGCGATGAACGCGAACAGAACGAACATATCTCCAAGTTGCTGCGTCGCAACGCGGGCAGTCGCAGTCTGCATAATTTCGATCCGGGCATACCCTCGGAGTACTCGCTGGCCCAAATGGAACGCATCATTGACAAGTCATGGGAGGATCTCATTGAGATCGACAAGACATCGGAGACTTCGAAGCTGCAGCAACTTGTCGACAACATCGAGAATAAGCTAACGGATCCGAATCAGTGCATCTTCTGTCAGAAGGTCATGTCGTGCCGCAGTTCGCTGCAAATGCACATACGTACACACACGGGCGAGCGTCCGTTTCGCTGTAAGATCTGCGGGCGTGCCTTTGCCACGAAGGGCAACCTGAAGGCGCACATGAGCATACACAAGATCAAGCCGCCGATGCGCAGCCAATTCAAGTGTCCTGTGTGCCATCAGAAGTTCTCGAATGGCATCATCTTACAGCAACACATACGCATACATACGATCGATGAGGCAGCCGGTGGCGCGGTCGCTGGCGGCGTGAGTGGCTGTTTGCCACTGGCGCCCATGAGCAATGAAACAGCATCGGAGCATAATTTACGGATGAAGTCCCTGGAATTGGGCATAGACGATCAAAACTCGAATAAATCGCTCGGCACTTCCGATACCCTGGACTTCTCCACAGTCTCGGACAACTCTGGCCAACGTTCGGGGTCTTCGCAGGGCGATTTCGATGAGTTCATGACCATGGATAGCACCGATGATTCGCGTGATAACTCGAGCAATGCCACACCTTTGGATAGACGCGTCACCAATGACTATGACGACAAATCGGAGCAGCTGGACTATGGTCGTGAGAGCGTTGAGCTGCCGGGCATAATGGATCTGTCGGCTGCACGTCACTTTGCCATGAATGGCGCTGGAACGGCTGCGAGTGGCGTTGGCATTGGCATGGCCAAATCGACGCTGGAACGTTTGCCGATGCTTGGCATGCCGCCGAATCTGCTGCTGATGGCCGCCGCACGCGAAGAGTTGCAAGCACTTGGCGCACATGCCAAATTTCCGTTGTTGCCATTTGGACCGCTCAGCTTTATGGGTCTGCAACCACCTGCACATATATGCAATTTTTGCTTCAAAATACTACCAAATTCAGCTGCTTTGGAGAATCATCTACAAAGTGAACATACCAAAGACGTGAATACGAATGCGAATGCGGCGAATCGTTCCAACTGTGATACAACAGCGTCACCATTCAGTGCGAAGCTAACATTAAATCCAAATCTCTTTCCGAAGAAACGCGTCGCCGACGATGCGACAAACTCAAATCAGAATCTTGAAAATGAGCACGAAACAcgcgccgctgccgctgcccaCAGTTATGAGCAGCGGGGCGTGTGTGGGGTGAGCAGTGCAGGTAGCAGTCTGGGCAGAGAACGTGACTTGTTGGATGATTGTGCCGCACACATCAAACAGGAGGAGGAACTCGATGAGAGagacacagcaacaacaccaatagCGGAGAGTCTCGGCGGCGGCAGTGGTGGCGGCACAGGTGTTGGGGCAGGTTGTCGTCAAGATGAACTTGGCATGAGCAATTTTCCAACAGCGACGCCGCTACATGATGCCGATGCCGAACAATCGCTCATGAAAATGCAATTGCATGCGCATCGTTTTCCCGCCAGTCCGTTGGACTTTCAACAGGCATTGATGTCCGCCGGACCGCCGACCACGAGTCTCGATCCGCCAGCGAATAATAAACACTTTTGTCATGTCTGTCGACGCAATTTCAGCTCAAGTTCAGCACTCCAAATCCATATGCGTACACACACCGGCGACAAACCATTTCAGTGCAATGTCTGCCAGAAGGCGTTCACAACGAAGGGCAACTTGAAGGTGCACATGGGCACACATATGTGGACGAATCCGACATCACGACGCGGTCGACGCATGTCGCTGGAATTGCCAATGCACGGACGTGCCAATGAGCCGGACTTTATGCAACGACCACGACCCGATCTGTTCTTTCCCTATTTGCCGCCTTTCTTTAACGGTCTGCCGCCCAAGCCCGGCGAGTTGAGTCCCGGCAGCGCTTTTCCCAGCATACCGCCACCGCACTTTCCCAATGGCGCCGCGGCCGCTGCTACAACGGCGCCCAAATATCCGCCTGGCCTCTTAGGTTTTCCCAATTTCCTTGGCTCGCATTATCTGGGCACACATTTGGAGCGTggtcgcagcagcagcaaatctCCAACGCCGACTCATGATGAAGCACTGCCGCCGCAGCCGCCGTCGACGTCAGCGCGCACGCCGCAAAGTGTTACGCCCGAGGAGATCgcttggcagcagcagcaccagcatTCCTTGCTGCACATTAAGACCgaaaacaatcaaaatgaaTGTAATCCAGTGGACGAAGGCGACGatgacgaacaacaacaacaacagcaattgcaTGAGCATGAGCATGGCCAGCGCCTGAGACAAGCGCAGGACGAAAGCGGTGAGAAGTAG
Protein Sequence: MCSIFHNRINYRGPRSSSNGSSNDGGDASVSVLAKELDADRNNNGSNAEEDNLPAEKESVADTNTADTMRNKMSARTPSNGERPELDELEEDEDEDVAVASASASSQAEMAAEEDENENSNEALDLSVISGRLPHSGHVALEALQHTKVAVAQFAATALANSHHYYGADTGPGASEMAMVQSTIFNVQRQHIMQLQLIQHLQSQLKRAGNSLVRREEDGEEEAEPEAEIEMEREQQAEQTEHSVKCERELDASPSDKAQIMRESEEYVKPMRRTDDDDELAKKSTVEKQNLKTDSRRETELDECNRSGTKQDTNSNSNNNNNSSNRNSYQPLMCDISSTLASTIITNHDPPPAPNEPNCLEMLQRRTEEVLDSASQSLHASQLQDEYEYTQKDAQGRGEIFKHRCKYCGKIFGSYSALQIHLRSHTGERPFQCNVCGSKFTTKGNLKVHYQRHTQIFPPMLLPPGVNGGMQAEHYAGYPGNGIVPPPPPPPPPPPPPPSAAMSTAVRYEPRPTTPAQNFIKDLSVREAEEAIVDDEPTQEDESVGAANALKATQAAESNSQQAEDLSKPTLPLPAPTSNATTRESTPERLSAKSPKTTANIHEKTEKPMTSPAPKRNGSVRKRHSSAGTPPSEAKKQAPPPPLSHISDEREQNEHISKLLRRNAGSRSLHNFDPGIPSEYSLAQMERIIDKSWEDLIEIDKTSETSKLQQLVDNIENKLTDPNQCIFCQKVMSCRSSLQMHIRTHTGERPFRCKICGRAFATKGNLKAHMSIHKIKPPMRSQFKCPVCHQKFSNGIILQQHIRIHTIDEAAGGAVAGGVSGCLPLAPMSNETASEHNLRMKSLELGIDDQNSNKSLGTSDTLDFSTVSDNSGQRSGSSQGDFDEFMTMDSTDDSRDNSSNATPLDRRVTNDYDDKSEQLDYGRESVELPGIMDLSAARHFAMNGAGTAASGVGIGMAKSTLERLPMLGMPPNLLLMAAAREELQALGAHAKFPLLPFGPLSFMGLQPPAHICNFCFKILPNSAALENHLQSEHTKDVNTNANAANRSNCDTTASPFSAKLTLNPNLFPKKRVADDATNSNQNLENEHETRAAAAAHSYEQRGVCGVSSAGSSLGRERDLLDDCAAHIKQEEELDERDTATTPIAESLGGGSGGGTGVGAGCRQDELGMSNFPTATPLHDADAEQSLMKMQLHAHRFPASPLDFQQALMSAGPPTTSLDPPANNKHFCHVCRRNFSSSSALQIHMRTHTGDKPFQCNVCQKAFTTKGNLKVHMGTHMWTNPTSRRGRRMSLELPMHGRANEPDFMQRPRPDLFFPYLPPFFNGLPPKPGELSPGSAFPSIPPPHFPNGAAAAATTAPKYPPGLLGFPNFLGSHYLGTHLERGRSSSKSPTPTHDEALPPQPPSTSARTPQSVTPEEIAWQQQHQHSLLHIKTENNQNECNPVDEGDDDEQQQQQQLHEHEHGQRLRQAQDESGEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01196169;
90% Identity: iTF_01196169;
80% Identity: -