Basic Information

Insect: Phortica okadai
Gene Symbol: -
Assembly: GCA_034638295.1
Location: CM067848.1:720878-724074[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 5.1e-05 0.0048 17.6 0.8 1 23 112 135 112 135 0.96

2 16 0.012 1.1 10.2 0.2 2 23 140 162 139 162 0.93

3 16 2.2e-06 0.0002 21.9 2.0 2 23 173 195 172 195 0.96

4 16 0.00061 0.056 14.3 0.2 3 23 248 269 246 269 0.91

5 16 1.9e-06 0.00018 22.1 1.7 2 23 280 302 279 302 0.96

6 16 0.00045 0.042 14.7 7.5 1 23 434 457 434 457 0.97

7 16 0.026 2.4 9.1 9.5 2 23 624 645 624 645 0.97

8 16 3e-06 0.00027 21.5 3.8 1 23 651 674 651 674 0.94

9 16 2.4e-05 0.0022 18.7 0.2 1 23 679 702 679 702 0.96

10 16 7.3e-06 0.00068 20.3 3.6 1 23 723 745 723 745 0.96

11 16 0.00028 0.026 15.3 1.5 1 23 750 772 750 772 0.98

12 16 3.6e-05 0.0034 18.1 1.7 1 23 778 800 778 800 0.95

13 16 0.036 3.3 8.7 2.8 1 23 806 828 806 828 0.98

14 16 2.4e-06 0.00022 21.8 2.0 2 23 835 856 835 856 0.97

15 16 2.7e-08 2.6e-06 27.9 1.1 1 23 862 884 862 884 0.99

16 16 0.13 12 6.9 2.2 1 23 889 912 889 912 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	5.1e-05	0.0048	17.6	0.8	1	23	112	135	112	135	0.96
2	16	0.012	1.1	10.2	0.2	2	23	140	162	139	162	0.93
3	16	2.2e-06	0.0002	21.9	2.0	2	23	173	195	172	195	0.96
4	16	0.00061	0.056	14.3	0.2	3	23	248	269	246	269	0.91
5	16	1.9e-06	0.00018	22.1	1.7	2	23	280	302	279	302	0.96
6	16	0.00045	0.042	14.7	7.5	1	23	434	457	434	457	0.97
7	16	0.026	2.4	9.1	9.5	2	23	624	645	624	645	0.97
8	16	3e-06	0.00027	21.5	3.8	1	23	651	674	651	674	0.94
9	16	2.4e-05	0.0022	18.7	0.2	1	23	679	702	679	702	0.96
10	16	7.3e-06	0.00068	20.3	3.6	1	23	723	745	723	745	0.96
11	16	0.00028	0.026	15.3	1.5	1	23	750	772	750	772	0.98
12	16	3.6e-05	0.0034	18.1	1.7	1	23	778	800	778	800	0.95
13	16	0.036	3.3	8.7	2.8	1	23	806	828	806	828	0.98
14	16	2.4e-06	0.00022	21.8	2.0	2	23	835	856	835	856	0.97
15	16	2.7e-08	2.6e-06	27.9	1.1	1	23	862	884	862	884	0.99
16	16	0.13	12	6.9	2.2	1	23	889	912	889	912	0.94

Sequence Information

Coding Sequence: ATGACTGAGGAAACATTTGATGCAGAGCGCATTTGCCGTATCTGCTTGCGTGAGCAGGATAAATTGTTCCTCATTCATGATGAATCTCCCATAGAGCATAGCTTGAATTTGGTACAGATTCTGAACGAGTGCACCAGCTATAAAGTTGTGCGCTATGATAAGATGCCGCATCAGATGTGTGCCGGGTGTATTGACGATGCGCGTGCTGCGTACCGCTTTAAACGTAAAGCAGCTGAAGCATACCGTAAGCTGCTCGATATATATGGCAGTATAGCACCCAATAACAAAGAGAACTATGTCGATAACGGTACACAAACCGAGCACAGTTCTTTGTATCCTTGTGAGGTCTGCGATGAAAAGTTCTTTAGTTCAGATGAATTACGCCATCATCGCAGTGTTGAGCACCAAAATAAGCTGAAATGCAAGATATGCGGCGAGGAATATGATAAAATACGTTTGCTGCAATTGCATCAGGCGCAGACACATCAGGTGCAAAGTACCGTAACGGCAAATCTACAATGTAAAATTTGCGAACGTAGCTTTTCACGACGCGATCATGTTGTACGACACATGCGTAACGTGCACCAAAAGTCGGTCTATGAACAAACTAAAGTCACTGACAAGGATCAAGAGGAAATGGAATGTTTGTCGTTTCTCGAAGAGCCGGAGATGATTGTAATGACAGACGGCGATACTGAATTGGGCCAACAACACACTGttgaacaacaaaacaagcagAACTGCAAGGAATGCGGCAAGGTGTATGATAATCTACGTCTGCTGCAGTTACATCAAGTGCAAGCACATCAGGCGCAGCACAAGGAGACCGCGAACCTTCAATGCACAATTTGTGAACGTAGCTTTTCACGAAGCGATCATGTTCTACGACACATGCGCAACGTCCATCAAAAGTCATCAATAAATGAACAAACTAAAGTTAACGACAAAGATCAAGAAGAAATTGAATGTTTGACGTTACTCGAAGAACCGGAGATGATTGTGATGACAGACACCGGCACGGCTGGTCTAGTGCCGTACACGTCGCAGCAACGTATGTCGTCTAACAGCGAATCAGAAATGCATTATGTTGATGATTATGAAACGAATCCAATATCatgtgatgatgacgatgatgatgaatctAAGCCATGTGTCAGTAaggcacaacaacacaaattgttTGTCGACATGGAGCCCGAGTTGAATGCAGAATTAATGCAAACTAATAAAGCTGACATGAAGTCAGCAAACAACGAACATAATAAAAGATGTCACAAAGCAGCTGGCCTCGTAAGTAACCATCAGTGTAATGTGTGCCAACGAAAATTTGGAcgtgaatgccatctgcagCGACACATGCAGTCAATGCACGGCACAACACGGCACAAGTCTAAGCTGACAAAGCTGAAAAATACTGACAATCAAACCAAATCAAAGAAGAGCGATAGTGATGACAGCGAAAGTTCAGACGATTATACTAGGCCCGATGATGCGGACACACAAAGTCTGTACAATGGCAACAGTGAACCAGATGATGACGACGGTGGCGAAAATACGATGGCGGGTTTGGCTACACAGGAGAACTTTCAGGTGAAGACGGAACGAGTTGAAGCAGTTGATGCCAACACATTTACAACCGCACTGGACATCGCTGATATACCTTTAAAGCTCGAAGAAACGGAATGCAAGCAGGAAATTCTACTAGATGCGGATACAGAAATGTTAAATGCAACGACTGAGCAAAATGTGACAGaaacaaatagcaaaaaagttgtcaaaaATCGCAATAAGAAAGTTGAAATTGTACGTGAATATTTGCAAAAGAAGCGCACGACACGTAAACAACGTAATGATgaaaatccggataatcgtTGTGATTTGTGCCAAAGAACTTTTTCACGACACTGTCATCTGTTGCGGCACAAATTGTCGCATCTGGAGCAGAAACCACACTCGTGTCCGCACTGTCCAAAGACATTTGCACGCAGCGATCATTTAAAGGCGCACGTCACCAGCTTGCACGGCAACAAGGACTACAAGTGTACCGTTTGCGAGGCAGCGTTCTCGCGTGCCGATGCACTCGAACGTCATAAATTGAGCAAACATGATGGTGCCGTTGTCGATGGTAATGGACACGGCAGCGCAATTCAGATCGATGCAAAGCTGCACGCCTGCGAATATTGTGAAAAGAAATTTACAAGTAAGAGTTATTTACGTAAACATACGCTTATACACACAGATCTGCTGTATGCGTGCAAGAGCTGCGATATGACATTCAAGGAGCGTCAACAATTGCGTGAACACGAAAAGACGCACACGAGTGAACGTAATTTTCTCTGTTGCATTTGCGGTGATAGTTTTGCACGCAATGATTATCTACGCGTGCACATGCGTCGTCATAATGGCGAAAAGCCATACAAATGCCGTTACTGCTGTAAGGGATTTCCGCGCGCCACCGATGTCAAAGTACATGAGCGCTATCACACGGGCACCAAACCCAATGTGTGCACACTCTGTAACAAAGGCTTTCATCGTGCTTACAATCTTACAATACACATGCGTACCCATACCGGTGAACGGCCGTACAAATGCGACCAATGTCCGAAAAGTTTTACACAGAGTAACGATCTGAAAGCGCACATACGTCGACACACCGGTGAACGTTACAAATGCAATGAGTGCGAAGCCTGTTTTCTACAATTATATGCCATGCGTCATCATGCGCTCAGTGTTCATGGCACACATATACAATCGAAGACTGGTCGTTTGCAGCGTACTGGTCTCTATGATGATCCACAGACGCAGCCACAGATCACTACGGTACTTGTGGCGCCACTTAATTATGAACCAACGGATAATCAgacacagcaacagcagctgcagcagcagcaacaggtCACTACTACAGCGCTAACGCAACTGAACACGCAAAACTCAGAGGACAATTCAGCACGCAGCTTTGCGTCTTCATCCGTTGATACAGTGGTCATGCAACCGGTATCAGCTCAGGCTACTTTGGCGCCAGAATATTTGTCGGAATATACAGTCGATCTCCCAAGCGCTATCTGTTAG
Protein Sequence: MTEETFDAERICRICLREQDKLFLIHDESPIEHSLNLVQILNECTSYKVVRYDKMPHQMCAGCIDDARAAYRFKRKAAEAYRKLLDIYGSIAPNNKENYVDNGTQTEHSSLYPCEVCDEKFFSSDELRHHRSVEHQNKLKCKICGEEYDKIRLLQLHQAQTHQVQSTVTANLQCKICERSFSRRDHVVRHMRNVHQKSVYEQTKVTDKDQEEMECLSFLEEPEMIVMTDGDTELGQQHTVEQQNKQNCKECGKVYDNLRLLQLHQVQAHQAQHKETANLQCTICERSFSRSDHVLRHMRNVHQKSSINEQTKVNDKDQEEIECLTLLEEPEMIVMTDTGTAGLVPYTSQQRMSSNSESEMHYVDDYETNPISCDDDDDDESKPCVSKAQQHKLFVDMEPELNAELMQTNKADMKSANNEHNKRCHKAAGLVSNHQCNVCQRKFGRECHLQRHMQSMHGTTRHKSKLTKLKNTDNQTKSKKSDSDDSESSDDYTRPDDADTQSLYNGNSEPDDDDGGENTMAGLATQENFQVKTERVEAVDANTFTTALDIADIPLKLEETECKQEILLDADTEMLNATTEQNVTETNSKKVVKNRNKKVEIVREYLQKKRTTRKQRNDENPDNRCDLCQRTFSRHCHLLRHKLSHLEQKPHSCPHCPKTFARSDHLKAHVTSLHGNKDYKCTVCEAAFSRADALERHKLSKHDGAVVDGNGHGSAIQIDAKLHACEYCEKKFTSKSYLRKHTLIHTDLLYACKSCDMTFKERQQLREHEKTHTSERNFLCCICGDSFARNDYLRVHMRRHNGEKPYKCRYCCKGFPRATDVKVHERYHTGTKPNVCTLCNKGFHRAYNLTIHMRTHTGERPYKCDQCPKSFTQSNDLKAHIRRHTGERYKCNECEACFLQLYAMRHHALSVHGTHIQSKTGRLQRTGLYDDPQTQPQITTVLVAPLNYEPTDNQTQQQQLQQQQQVTTTALTQLNTQNSEDNSARSFASSSVDTVVMQPVSAQATLAPEYLSEYTVDLPSAIC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01196139;
90% Identity: iTF_01196139;
80% Identity: -