Basic Information

Gene Symbol
Hr38
Assembly
GCA_034638295.1
Location
CM067850.1:3934464-3938031[-]

Transcription Factor Domain

TF Family
ESR
Domain
zf-C4|ESR-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
This entry represents CLAVATA3/ESR (CLE)-related protein 14 from Arabidopsis thaliana (CLE14) and similar proteins predominantly found in plants. CLE14 is an extracellular signal peptide that regulates cell fate. It represses root apical meristem maintenance and functions as an elicitor of the root meristem differentiation through the CLV2/CRN complex signalling pathway. This protein inhibits irreversibly root growth by reducing cell division rates in the root apical meristem [1, 2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 2 2.3e+04 -6.4 15.7 13 68 51 107 21 202 0.55
2 4 2 2.3e+04 -5.1 7.1 7 39 293 325 285 373 0.57
3 4 1.4 1.7e+04 -4.5 0.7 14 50 538 574 533 583 0.41
4 4 7.4e-41 8.5e-37 127.6 0.0 1 268 681 942 681 946 0.92

Sequence Information

Coding Sequence
atgtTACTGTTGCAACCAAAtAACTCATTTAGTTCACTTTCTCCGTTTGATAATTTTTCAACGCAACAAGCGAACaacgcgcaacaacaacaacaacaacagcaacaacatcatcaccaccaccacaatcaacatcaacatcatcatcaccaacaccaacaacaacaacagcagcagcagcaacatcatcaacaacaactacagcatcaccaacaacaacagcaacaacaacatcaacagttACAACAAATCCAACACGACGAACAGCAATTGTTGTCCCATGACGATCAACTAATAAGCGATCTGACGGACGCGCCCGTTTCGCACACCGAACTCATCGATCACAGTTTCAATCAACTGTCCGATCTCTTCTTTCCCACGGATTCAAATAATTCGCTGCTCTCGCCAAGCCTTGACGCGCCAACGTCCAATTACGCCGATCCCGGCTGTCAGCACTCGGCCACATCGTCGGTGGTCACAACGTTGCAAGATCTACACTCGTCCTGCGAAACTCTTATCGGCAGCAGTGAGGACATCACCAGTTCCATTGAGAATCTCACAAAGTTGACTTGTCTGCGCGATAAACGTCTCTCCTCCATACCCGAACAGCAGACAGCAAGCACACCGAACTCTGAGCAGGAACACTCACTGTGTTTCGGTCGCTCTACGCCACAGGAATTGGGTTTACTTACGCTCCGCTCGAGCAGCGATCCAGCCATAGCGCTACACGCACACGCCCAAGAGCGTCAGGCACAGTTGAATCATACACGACACGGCGTCACCGATCTGCTGATCTCGCCTGTGAGCGATCCGCTCTCTTGCGGCAGCTCCTTGCCTAGCTTTCAGGAGACTTACTCCCTCAAGTATAGCCAACAGCAactacagcagcagcagcaacaacaacaacagcagcagcaacagcaacagtctGCGGCAGCCACTGCCTCGCCCACCATTGTTGGGCCAACAAGcacagccacgcccactgatCAAACGCTTACACTGAAGATGGACGAGGACTGTTTTCCATTGACAACGGCAGCCGATGTGGTCGCTGGTCTCAATCAGCACAATTTgctgcatatgcaacaacaactccaacagcagcagcaacaacatcaactgcagccgcaacagcaacatgccGCCGTCGGCAATAACAACAGTAACTCAGCCTACGGCTATCATGTACATTTGAATGCTATCAGCAATCCGTCTACAGCATCGCCGGGCTCTTCCGCCTCGTCGGCTTATGAATTCAACGGCGTCTCGTCCAGCAATGCGAGCCGTGAGCCATTGACCAATTTTGGTGAGCCCTtctatcagcaacaacaacagcagcagcaccaacagTATCAGCAAAATTACGGCGGCGCACCGCACAGCGGCGAACGTTACTCGCTGCCCACTTTTCCCACCATTGCCGAGCTCGAACAGGCCACGGCACTCGCATCGAGCGCGGTATCGCCCCTAAGGCGTGCCTCCTTGCCCATACAACGCTCCGGTTCGCCAGCGTCTTCGGCTCATAGCCCAAAGCAGCCGAAGCTTTCGATTGGCATCAACATCCCAGCTGGCGGTGGCGGCGTTGGCCTCCTACAGAAGCACCATCAACACcatcaccaccaacaacagccacagcaGCCGCTGCATCACCACCACCAGCTGTCCAGCGCGCCCAGCTCCGCTTCCAATTCGCCGAGTCTACGCCAGTCGACGGTCGCGGCTGTGGTCGTCGTCACGCCGAGCATAAACGCGCCGCCGACTCTCAATAATGGCGCCAACGCCAGTGATCTCCTGAACGGCCGCATCATGCAGCCGGCATCGCAGCTGTGTGCCGTCTGTGGCGACACTGCTGCCTGTCAACATTATGGCGTACGCACCTGCGAGGGTTGCAAGGGCTTCTTCAAGCGCACCGTACAAAAGGGCTCCAAGTACGTTTGCCTCGCCGACAAGAATTGTCCCGTCGACAAGCGGCGACGCAATCGTTGCCAATTTTGTCGTTTCCAAAAGTGTTTGGCCGTCGGCATGGTCAAGGAAGTGGTGCGCACCGATTCGCTTAAAGGACGTCGCGGTCGTTTGCCATCCAAGCCGAAATCGCCACAAGAATCGCCACCATCACCACCTGTCTCGCTGATCACAGCGCTCGTGCGTGGTCATGTCGACACAACGCCCGATCCCTCTTGCCTCGACTATACACAATACGAAGAGCCCACCATGACGGATTCGCCAACTCTGATGCTTAGCGAAGCCGACAAAGTACAGCAATTCTACAATCTGCTGACAACATCGGTCGATGTGATTAAACAATTTGCCGAAAAGATACCCGGCTACACCGAACTCTGCGTCGAAGATCAAGAGCTGCTCTTCCAGTCTGCCTCGCTGGAGCTTTTCGTGTTGCGGCTCTCGTATCGTGCGCGCGTTGACGACACCAAGCTGACCTTTTGCAATGGCATCGTCTTGCATCGCAATCAATGTCGGCGTTCGTTCGGCGATTGGCTTAACGGCATACTTGAGTTCAGTCACAGTCTGCACAATCTCGAGATCGATATATCGGCATTTGCCTGCCTCTGCGCATTGACTCTGATCACCGAACGCCATGGCTTACGTGAACCGAAGAAAGTCGAACAGCTACAAATGAAGATCATTGGCAGTCTACGCGATCATGTTACCTACAATGCCGAGGCTCAGAAGAAACAACACTATTTCAGTCGTCTCCTCGGCAAATTGCCCGAATTGCGTTCGCTTAGCGTACAAGGCTTACAGCGTATCTTTTATCTGAAATTGGAGGATCTCGTGCCAGCACCGGCACTGATCGAGAACATGTTCGTCACCAGCCTGCCGTTCTAA
Protein Sequence
MLLLQPNNSFSSLSPFDNFSTQQANNAQQQQQQQQQHHHHHHNQHQHHHHQHQQQQQQQQQHHQQQLQHHQQQQQQQHQQLQQIQHDEQQLLSHDDQLISDLTDAPVSHTELIDHSFNQLSDLFFPTDSNNSLLSPSLDAPTSNYADPGCQHSATSSVVTTLQDLHSSCETLIGSSEDITSSIENLTKLTCLRDKRLSSIPEQQTASTPNSEQEHSLCFGRSTPQELGLLTLRSSSDPAIALHAHAQERQAQLNHTRHGVTDLLISPVSDPLSCGSSLPSFQETYSLKYSQQQLQQQQQQQQQQQQQQQSAAATASPTIVGPTSTATPTDQTLTLKMDEDCFPLTTAADVVAGLNQHNLLHMQQQLQQQQQQHQLQPQQQHAAVGNNNSNSAYGYHVHLNAISNPSTASPGSSASSAYEFNGVSSSNASREPLTNFGEPFYQQQQQQQHQQYQQNYGGAPHSGERYSLPTFPTIAELEQATALASSAVSPLRRASLPIQRSGSPASSAHSPKQPKLSIGINIPAGGGGVGLLQKHHQHHHHQQQPQQPLHHHHQLSSAPSSASNSPSLRQSTVAAVVVVTPSINAPPTLNNGANASDLLNGRIMQPASQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALVRGHVDTTPDPSCLDYTQYEEPTMTDSPTLMLSEADKVQQFYNLLTTSVDVIKQFAEKIPGYTELCVEDQELLFQSASLELFVLRLSYRARVDDTKLTFCNGIVLHRNQCRRSFGDWLNGILEFSHSLHNLEIDISAFACLCALTLITERHGLREPKKVEQLQMKIIGSLRDHVTYNAEAQKKQHYFSRLLGKLPELRSLSVQGLQRIFYLKLEDLVPAPALIENMFVTSLPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00251398;
90% Identity
iTF_01195324; iTF_01195293;
80% Identity
iTF_01195324; iTF_01195293;