Poka005811.1
Basic Information
- Insect
- Phortica okadai
- Gene Symbol
- Mblk-1_1
- Assembly
- GCA_034638295.1
- Location
- CM067849.1:11938352-11950594[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1e-13 8.3e-10 38.6 0.0 1 45 408 453 408 453 0.95 2 2 1.9e-18 2.6e-15 56.2 0.0 1 43 934 977 934 979 0.95
Sequence Information
- Coding Sequence
- ATGGGTCGCAGGAAATGGAAGCATTACCAAGAAGCCTTAACGCGCACCCAATTCAATGTAGAAGAAGAGCCAcaaacagccaacaacaacaacagcagcaacaaattggatcaaatccaacaacaacaagaagaagaacagaacGAAGTAACAGAACAAAACCACCGCCAAAAATCAGTGCAAAATATAGaacagcaaaaacagcaacaacaacaacaacaacaaatagaaGAAAACGATTCGCTTATAAGCAACGGCAAAGAACAGAAGAATACTGAATTATTAGaaacaaTCGAGGAAACATcacataataataacaacaacaacaaacacaacagtTTAAGTAAAGTTACATCACAAGATACATCACAAGACATCGACGACACAGTCGTCTCAGAGCTTAGTCCAACAACAgtagtaacaacaacaccgtTGACACCAACACCACCGCCTGAACCCATCGATTGGACACCGTCGGACAAGTGTAATTTCTGCATTGACGGTCGCCTGCTCACAGTGAACGCACAGGGTGAACTTGTGGCCGAAAACGGTCCTTTGTCCACATCCTTAACGGCTGGAGCTGTGtcacttcaacaacaacaacaacagcaacagcaacagcaacaacaacagtcgcaACATTTGCTGCAACTGGAGACGGACAGCGATTCCAGTGAGTCGCAGCAACACGCCACTAACCAAGCCAACGCAGCGCCACGACGCGCGCAGAGCGACAACAAACGTGCGTTTGTCAATAAGCTACTAACATCACGTCTAAGCGATTTGCCCGCGAATATGACCTCGATGGATTCAATGGCCGCACAATTGGCTGCCATACAAACGATCGTTGCAACGGAGTTTCAAACAAATTATAATTTAATGTTGGCCAAgcgtcagcaacagcaacagcatgagcagcaacagcagcaacagcagcagcaaactaATTCGGTTCAAATACCAACTACCTCAGAGTTAACAGTCGCCGCCGATGCCGAGAACGATGCCGATGGCGATGTCGCCGCAATTAGTCCTTCACTCAAAGATTCACCCAGTCCCAGTGATGCAACCGGTGAACAACCATTAGATCTTAGTTCCAAGCCATCGCCGAACTCATCAATTAGCGGTGATTTGAAAGCCGTTAGGACGAAATCAGCTTGTGCAACGCCGATACCTGGTGGCAACACCGGCGGCTCTAGCGGTGGTCGACGCAGCGCCTACAGCGAGGATGATCTGAGCAACGCGCTGCGTGACATACAGGAGGGCAAGCTGGACATACACAAAGCGGCCGTCGTTTACAATGTGCCGCGACCGACACTGCGCAACAGACTCTACAGGCTGGCTTTGGACGCAAAGCGTTCAAATACGCAAACGGCCGCCGAGCTGCAGCAACTGCAGCTGGTGCTCAAAGGCGAGCTTTCGACTGACGAGGGCGCCGATggcgatgctgatgctgacggtgatgatgatgatgatggcaacAGTAACACATCATCGAATACGCCGCAGACAGGGAATGCTGCATTCCAGGATCTTGCCAGTAGAATCCTCTTGCCGGCACAGCTGAACCGACGAGTGCCCAATGAGAGCGACTTGAGCACCGAGGATGCCGAGACCATTGCCGCTGTCAGTGCATCCCCGAAGCTCGCCAGTTCGTTGCGCTCACACAGAACCACGCCCACCAGCGTTGGTCATCTACCGGCACAGACAACATCGCCACAACCACCGCCACAGGTGCAGCCCATGTGGATCGACACGAACATGCTGCTGCAGACATTGCTGCTGACCACGGGTGTTCTGCAGCCGAAGCTTGACGAAACGCTGACGGTGTGCGATCTGATCAAGGCGCTGCTACTGAACAGCGGCAGCGGCTTCATCTCTGACTTTGCCAACGCGCCAGCGGCTTTAAccgcagcggcggcggcagcagcctCGCTCAATGCCGGCGACGGAGCGCTCAATAATGGTAAGCCAAATATGATTGATCAGCGCTTGCTCTTGCAACAGCTCCAgatacagcagcaacaacagcagcagcagcaacaacaacaacaacagcaacaacatgcgcaggcacaacaacaaacgccaCCGTTCCGTCAACGCCAACGAAAGTCTGAGACACCGGAGATGACATCGCCGCTCGACTCTAGCGAGCCGTGTGACGATGCAGCATCCATACtgaagattccgtcctacaaaCCGATCGCGGGCGCCTCAAGTTCATCGCCCTCGTTGCTATGCGGCGGCAGTGGCGTCGGTCTCGGCAACAGCGCCCTTAACAACAACTCCAATTCGAGCGCAAATCGCAACGGCGACAGTCCATTGTCTTCGTCACCCATGCTTGCCGCCGCAGTCGCTGCGGCAGCCAACAGCAATTCGCATGGCGGCGTTTATcggcacaacaacagcaatttaCTGCCTGCGCCGCCGACCTCGTTCCGCGAAGTCATGGCCAACAGCATACACCGGACGATTAATGAGCAGGCGAACAAAGAGGCCCAAGCGGCCGCTGCCTCAATGCTGGGCCTTGGCGCCGGCGCTGAGTCAGAGCGCAATAACGGCAATTCCGTCGGCGATTATAAGAAGCCCAGCATTTCGGTGGCCAAAAACATTTACGGCACGGACACATCGCGCTTTGGCGCATCACCCAACCTGCTCGCGCCACTCCACCAGTCACACCTGCCACACCATCATTCGCACGGGCATTCACACTCGCATCACCTCAGCCGGCAAGAAGCCGCTGCGTTGGCCGCCGGCAAGGGTACACGGCCGAAGCGCGGCAAGTATCGCAACTACGACCGCGACAGCCTTGTCGAGGCAGTGAAGGCGGTACAGCGCGGCGAGATGTCGGTTCATCGTGCCGGCAGCTATTACGGCGTGCCGCACTCGACGCTCGAGTACAAGGTAAAGGAACGTCATCTGATGAGGCCGCGTAAACGCGAACCGAAGCCGCAACCTGGCCTGGACGGCAGCAGTTCCAGCAGCGCCACAAACAAGAACTCAAACATTCCCGGCCAGAACAACCTCGACAAGCTGAAGGCGAGCAGTGCCAGCTCCAAGCTAAGCAATGCCCTTAAGAATAACACGCAATCCACGACGCCCAATAATGGCATGAAGATGCCCATCTTCGATGGGGGCGTGTCCGCTCAACTGCCCTATCAGCCGCACATGTTCTGGCAACCGCCAACAAATGCGGCCAACTTTGCCAGCCTCGATTTTGATCGCAATGCAGCCGCGGCAGCAGCTGCGGCAGCGGCTGCATCCCAAGGCACCGGCGCCGTTGGCAATGTCAATTCGGAATTCCTCAAGTCGCACATACAGGAGGCAATACGGCTGAACGCGGCCAATGTGACGAACGCCAACAGTCCAAGTCCGCTTGGCGGCGGTCAGAATCATCATGGCATGCCGCAGATGAAGAGCGCACTCGAGGTCGTTGAGAACATCTACGATGATATCATACGTAAAACGCTCGATCGCAAAAGCAGCGATTGCAGCGGCCCTACCGGGCCCGGCAATGGGAATGCACTGCTCGATCAGTTGCTCGTGAAGAAGTCACCGCTGCCTTTTACGAATAATCGTAGCAATGACTATGCCACCGCTGCCTGCTCCTCGAATACGATCAAACGTTCGGCGGTCAGTCCGCTGCCCTACGCGGAAGTGAAACGCGAACGTGCCAGTCCGGAACGCAGCGGCAGCAATGGCGGCAGCgagagcagcagcaacagcgatGATGAGGACAATGGCAGTCGACAAGCTCTGCATGAGGATGCTTTGTttgaacacaacaacaataacaacaacaatagcaacaaatgcaacaacaatggcggcatattgcaacaacaacagcaccagcaacaacaacagcggagTAGCAGTCGTTTTACCTCACGTGATTCCGAAACGGACGCGAGCAGCATCAAAAGTGAACGTTCCAATTCCACGCATCGATCGCAGAATCAGCACCAGCAACACcatcaacaccaccaacaacagcagcacaacaacaacagcagctgcagtggcagcagcaaaATAATGGATCTCAATGGCAGTGCCAAGCTCGAACCAATGGTGACAATGGCTTCAGCAATGGACAGTCACAATAGCGCCAGCGCCAATGCCTCCATCTTACATGAGAAGCTGGCGCAAATTAAGTCGGAGCAGATCGAGCACGAAGAAGGTCCGAACTTATAG
- Protein Sequence
- MGRRKWKHYQEALTRTQFNVEEEPQTANNNNSSNKLDQIQQQQEEEQNEVTEQNHRQKSVQNIEQQKQQQQQQQQIEENDSLISNGKEQKNTELLETIEETSHNNNNNNKHNSLSKVTSQDTSQDIDDTVVSELSPTTVVTTTPLTPTPPPEPIDWTPSDKCNFCIDGRLLTVNAQGELVAENGPLSTSLTAGAVSLQQQQQQQQQQQQQQSQHLLQLETDSDSSESQQHATNQANAAPRRAQSDNKRAFVNKLLTSRLSDLPANMTSMDSMAAQLAAIQTIVATEFQTNYNLMLAKRQQQQQHEQQQQQQQQQTNSVQIPTTSELTVAADAENDADGDVAAISPSLKDSPSPSDATGEQPLDLSSKPSPNSSISGDLKAVRTKSACATPIPGGNTGGSSGGRRSAYSEDDLSNALRDIQEGKLDIHKAAVVYNVPRPTLRNRLYRLALDAKRSNTQTAAELQQLQLVLKGELSTDEGADGDADADGDDDDDGNSNTSSNTPQTGNAAFQDLASRILLPAQLNRRVPNESDLSTEDAETIAAVSASPKLASSLRSHRTTPTSVGHLPAQTTSPQPPPQVQPMWIDTNMLLQTLLLTTGVLQPKLDETLTVCDLIKALLLNSGSGFISDFANAPAALTAAAAAAASLNAGDGALNNGKPNMIDQRLLLQQLQIQQQQQQQQQQQQQQQQHAQAQQQTPPFRQRQRKSETPEMTSPLDSSEPCDDAASILKIPSYKPIAGASSSSPSLLCGGSGVGLGNSALNNNSNSSANRNGDSPLSSSPMLAAAVAAAANSNSHGGVYRHNNSNLLPAPPTSFREVMANSIHRTINEQANKEAQAAAASMLGLGAGAESERNNGNSVGDYKKPSISVAKNIYGTDTSRFGASPNLLAPLHQSHLPHHHSHGHSHSHHLSRQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPGLDGSSSSSATNKNSNIPGQNNLDKLKASSASSKLSNALKNNTQSTTPNNGMKMPIFDGGVSAQLPYQPHMFWQPPTNAANFASLDFDRNAAAAAAAAAAASQGTGAVGNVNSEFLKSHIQEAIRLNAANVTNANSPSPLGGGQNHHGMPQMKSALEVVENIYDDIIRKTLDRKSSDCSGPTGPGNGNALLDQLLVKKSPLPFTNNRSNDYATAACSSNTIKRSAVSPLPYAEVKRERASPERSGSNGGSESSSNSDDEDNGSRQALHEDALFEHNNNNNNNSNKCNNNGGILQQQQHQQQQQRSSSRFTSRDSETDASSIKSERSNSTHRSQNQHQQHHQHHQQQQHNNNSSCSGSSKIMDLNGSAKLEPMVTMASAMDSHNSASANASILHEKLAQIKSEQIEHEEGPNL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -