Basic Information

Gene Symbol
ct
Assembly
GCA_034638295.1
Location
CM067848.1:3690678-3712998[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.4e-27 6.2e-23 80.9 0.0 3 72 724 794 722 799 0.95
2 3 5.5e-32 6.3e-28 97.0 0.0 3 77 1164 1239 1162 1241 0.96
3 3 1.2e-31 1.4e-27 95.8 0.0 3 77 1410 1485 1408 1487 0.96

Sequence Information

Coding Sequence
ATGTTCCAGATTAAAGCACTTTTGGAGGAAGTGCAACGTCTGCGTGCACTCGAACAGACACACATCGTACAAATTCATCGTTTGGAGGAACATTTGGAGGTGAAGCGACAACATATAATGCGCCTTGAAGCGCGTCTCGATAAGCAACAAATCAATGAGGCGCTCGCTGAAGCAACAGCGTTggctgcagcagcaacagcaaccgcaacaacaacaacagcaagcaaCACATTAttgaacaataacaaaatggcaATTGAACATGAAAGCATTGGCATTGTTAATGATAATGAAGAtggtgatgacgatgatgatattatgcatgcacaaaaacaacacagcaATGAAcatgatgacaatgatgagGACATTGATAATGAAGTTGGCATGATGATTggcaatgatgataatgatgatgatcatcatcatcatgcaaGAAGAAGCGTGCCAACAATTGAGAAAATGTCGATCGATGAACATGATTCCGAGGCTGGCGATAATGATAACGAACacgatgatgatcatgatgagcACGATGATAATGAACATGTGCAAacaacagccaacaacaacaacaataacaacaacatcattaacaatgataatgatgatattGTTGCAACAAATGATGAAATTGCTGAgattaaaatcaaaaaggaAAATCACAGCCCAATCGATTTGGATGTCATTAGTCAACAATCCGCCTTggccgctgctgccgctgccgctgcggcCGCTGCCTGCGCCAATGATCCAAATAAATTCCAAGAATTATTCTTAGAACGGACAAAGGCTTTTGCCGCTGAGGCGCTCAAATGTAGcgcgaacaacaacagcaacaacagcgaagaaacaacaagaaaattaaattttcatgataatgttgttgctgttgatccAACCATGAATGACATTGACAAGGTCAATAATATTGAACAACAAATGTTTGGCTCATTATTGAATGAGGATTTTGTTAATTCATATTGGCGACGTAATATTGAacagacgacaacaacaacagcaacagcaacaacaacaccaccaatgccaatgccaacagcaacaacaacagataaCTGTAAGACGCCAAATCTATTTCAAAATGccaatcagcaacaacaacaacatgcaacgcaacatcaacagcaacaacaacaacaacatttagccgtccatcagcaacaacaacaccatcatcaacaacagcaacatggcCTTGGCtacttgcaacaacaacagcaacaacaacaacaactaccacATTATCAGCATGGACCTTCGTCCACGACGCTGCttagtcaattggttaatgCAACATTCTCGACAAATTCTACAAATAcctcttcttcctcttcttccaATCTACGCACAGATGGCCTAAATCAtcatctacaacaacaacaccaccaccagcagcaacaacaacaacaccaccaccaccatacgtcacagcagcagcaacaacaacaacatcagctacaccatcatcatcagcagcagcaacaacaacaacaacacccgcATTTACATCATCATtcacaacatcatcatcataatctaCAAGAACATGATATGaaatcaacgacaacaacagcagcagcaacaacaaattcaacaacatCGCTTGTTGCCAGtggtcaacagcaacagcaacaacagcaacaacaacaccaccaccaGCATCATCATTTAacacatcatcagcaacaggaTAATTCGTCCAGCGCTAGCACACCAAATACGCCAGCCGCAGCCAACGCcgccgcagcagcaacagcaacaacaacaacaacaacggaccAATTGGCCGCAACATTATTGGCAAATGGCGGcaaaacaatagcaacaacactcACCGGCgaagataacaacaacagtctgACACCGAATGCAAATGCTGCGGCCGCTGCTGCCGCCATGGCTGCCCATCATGCCCAACATTTGCCGCCTGGCTTTTTGCCCGCGCTGCCCTTCCCCTTCGCTGCCGCTGCAGCAGCCGGCGCCGCTGCACAGGAACGCGGTCATTTCCGTTTTGCCGATTCGGAATTACAATTGCCGCCAGGCGCCTCAATGGCCGGCCGTTTGGGTGAGTCGTTGATACCAAAAGGTGATCCCATGGAGGCGAAATTACAGGAGATGCTGCGCTATAACATGGATAAATATGCCAATCAAGCGCTCGATACATTACACATTTCACGGCGTGTACGTGAATTGTTATCCGTGCACAATATCGGACAACGTTTATTTGCCAAATATATCTTGGGTCTGTCGCAGGGCACCGTTTCGGAATTGTTGTCGAAACCGAAGCCATGGGATAAACTAACCGAGAAGGGACGCGACAGTTATCGCAAGATGCATGCCTGGGCGTGTGATGATAATGCTGTCATGCTGCTCAAATCGCTAATACCCAAAAAAGATTCCGGCTTGCCACAATATGCTGGTCGCAATGATGATTCCATGTCTGAGGATCGTATTGCGCATATATTGAATGAAGCATCAACGTTGATGAAGAATTCCGGACCAAATGCATTGCAGGAACAACAACGACGCTCATCGACATTGGATGAGACGCATAGTAATGATGATTCAAAATCACCGCCACAGACCTGTACATCGCCCTTCTATAAGGAACAAttgaaacagcaacaacaacaacagcaacagacacACGAAgcattacaacaacagcaacaacatcgttTGCGTCAAGAGGATTTGGTACAAGATAAAATGGCGCGTATCTATCAAGAGATAATGGCACGTGCACCACGTGAAGCGGCCTTCCCAAGTTTCCTGCTTTCGCCATTCCTTGGCGCTGCTGGTGGCATGCCCGGCGCTGCGGCCAATGCATTCCCAGCGATGGCAGCCGATGAGAATATACGTTTAGCCTTTGAGCGTGAAATGGctaaattgcaacaacaacaacaacaacagcaacaacaacagccgccaaattttccaaatttcTCCAGTTTAATGGCATTGCAACAACAAGTCTTGAATGGCGCACAAGATCTAACCTTGACCAAGGATATCAAAGACATTAAAGTGAACGGTCAACGTAACTCATTGGATCATTCACAAAATTCCATGGACGCGACCATGAATGCCATGAAGGAATCAAATAGCAACAGTGGCGGCCCAACCGGTCTGGGCGGCGATGCCGAACGTCATGGTGTCTTCCCATTGCATGTACGTAAATCCGATGGCGGTTGCCTGACACCGGCACCGCCTGCGCCACCCACAAGTAATGCCTCGGCACAGCACACCAATTCGGCCGCCGCCAGTCCGCTTAGCAATTCCATATTGCCGCCAGCGCTTAGCCAAACGGCAGAGGAATTCGCCGCAACGGCCAGTCCACTACAACGCATGGCCTCCATAACAAATTCGCTGATAACACAGCCGCCGGTGACGCCGCATCACTCGACGCCGCAACGTCCCACCAAAGCGGTCTTGCCGCcaatcacacaacaacaattcgaTATGTTCAACAATCTGAATACCGAGGATATTGTGCGACGCGTCAAGGAGGCGCTCTCACAGTATTCCATCTCACAGCGTCTCTTTGGCGAATCAGTGTTGGGTCTATCGCAGGGCTCCGTCTCAGATCTGTTGGCACGTCCGAAGCCTTGGCATATGCTCACACAGAAGGGACGTGAACCGTTCATACGCATGAAGATGTTCCTCGAGGATGACAATGCGGTGCACAAGCTGGTCGCCAGCCAATACAAGATCGCGCCCGAGAAACTGATGCGCACGGGCAGCTACAGCGGCAGTCCGCAGATACCGCAAGGCTTGGCCAATAAGATGCAAGCGGCCGCTTTGCCCATGCAAAAGATGATGAACGAACTGAAATTACAGGAACCGGCACAGGCACAGCACATAATGCAACAGATGCAAGCCGCGGCCGCTATGTCAGCGgccatgcaacaacaacagcaacagcaagtgCAGAGCCAACAGCAACATGCCGCAGTACAAGCCGCACAGgcagccgctgccgctgcggcACATCATCAGAATATGTTGTTAACATCGCCCGGTCTGCCGCCACAGCATGCGATTAGTCTGCCAGCGGGCAATGGCGGACCCGGCGGCGCTGGCGGCGTTGGCGCTGTGGACAAGAAACCGATGATGATGCCGGTGCATGCATCGCATCAGCCAAATGCCATGCGCAATATGCATCAGCACATGTCGCCCACCGTCTATGAGATGGCTGCTTTGACGCAGGATCTCGATACACACGACATCACCACCAAAATCAAGGAGGCGCTGCTCGCCAACAATATCGGTCAGAAGATATTCGGTGAGGCTGTGCTTGGACTGTCGCAGGGTTCGGTCTCGGAGTTGCTCAGCAAGCCGAAGCCATGGCATATGCTGTCGATAAAGGGTCGTGAGCCGTTCATACGCATGCAGTTGTGGCTCTCGGACTCGAATAATGTTGAACGTCTGCAGGTGCTGAAGAATGAACGACGCGAGGCAAGCAAACGACGCCGTTCCACCGGTCCGAATCAGCAGGATAATAGCTCCGATACATCGAGCAATGATACAAATGATTTCTATACCAGCAGCCCGGGACCGGGTTCCGTTGGTTCATCGGTAAGCGGCGCACCGCCGAACAAGAAACAACGTGTACTCTTCTCCGAGGAACAAAAGGAAGCGTTACGTTTGGCCTTTGCCCTCGATCCGTATCCGAATGTTGGTACCATTGAATTCCTTGCCAATGAATTGGGCTTGGCAACGCGCACCATCACCAATTGGTTCCACAATCATCGTATGCGTCTCAAGCAACAAGTGCCACATGGCCAGCCCGGCGCCGATAATCCGATACCGAGTCGCGAGAACACCAATGCGACACCATTCGATCCCGTCCAGTTTCGCATATTGCTGCAACAGCGTCTCGTCGAACTGCATAAGGAACGCATGGGCCTAAGCGGCGCACCGATACCCTACCCACCGTACTTCGCTGCCGCCGCACTGCTCGGCCGTAGTCTGGCCGGCATACCCGGCGCTGCTGCGGCCGCTGGTGCTgctgcagcggcggcggctgcTGCTGGCGCTGGCGAAAATGAGCTACAAGCACTGAATCAAGCCTTCAAAGAGCAAATGAGCGGTCTTGATCTATCAATGTCGACGCTGAAACGTGAACGTACCGACGACTATCAAGACGACATGGATGAGAGTCATGTCAGTGACAATGAATCGCTCGAAGGCGATGACAAGTCCGCATCGAGCGATTACAAAGATGCACTGCAGAAATCTGCCCTGGCTGCCGCCGCGTATCTGAGCAATGCGGCACGCAGTTCACGACGCAAACCCGCCGCACCGCAATGGGTCAATCCGGCGGGCAGTGCGGCCACCaatgcagcagcagccgcagcagctgGCGTGCCAGTGGGCGTCGGTATCGTTGGCGATAATGAGCGTATTATCAATGGCGTTTGTGTGATGCAACAGTCGGAATATAGTCGGGGCGATGATGGCGCCAACGTGGAGGCACAGACAGAGAAGAGCATCGTTGGCGGCGGCGTCGGCGGTGTTGAGCATGCCGGCAGCGAAGCCGATAATGAACATGCGCATTTGGATATCGATCAAAGTTTCATGGAGCCGGAGGTGCGCATTAAACAGGAGGAGGAGGATGAGGACGATGACTGCGGCAGCGAAGGTGGCGCTGATGCGGCGCAGCTTAATGCAACGGCagtcgcagcagcagcggcagccaAGGAGGATAAAATCAAAGTGATTACCGAGGAGAAGCTGCGCATGGTGCGTGTGCGACGCATgagcaacgacgacgatgaatcaacacagcagcagcagcagcaacagcagagcgCAACGGCGGCGACAACGGCGTGGAATTATTAA
Protein Sequence
MFQIKALLEEVQRLRALEQTHIVQIHRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAATATATTTTASNTLLNNNKMAIEHESIGIVNDNEDGDDDDDIMHAQKQHSNEHDDNDEDIDNEVGMMIGNDDNDDDHHHHARRSVPTIEKMSIDEHDSEAGDNDNEHDDDHDEHDDNEHVQTTANNNNNNNNIINNDNDDIVATNDEIAEIKIKKENHSPIDLDVISQQSALAAAAAAAAAAACANDPNKFQELFLERTKAFAAEALKCSANNNSNNSEETTRKLNFHDNVVAVDPTMNDIDKVNNIEQQMFGSLLNEDFVNSYWRRNIEQTTTTTATATTTPPMPMPTATTTDNCKTPNLFQNANQQQQQHATQHQQQQQQQHLAVHQQQQHHHQQQQHGLGYLQQQQQQQQQLPHYQHGPSSTTLLSQLVNATFSTNSTNTSSSSSSNLRTDGLNHHLQQQHHHQQQQQQHHHHHTSQQQQQQQHQLHHHHQQQQQQQQHPHLHHHSQHHHHNLQEHDMKSTTTTAAATTNSTTSLVASGQQQQQQQQQQHHHQHHHLTHHQQQDNSSSASTPNTPAAANAAAAATATTTTTTDQLAATLLANGGKTIATTLTGEDNNNSLTPNANAAAAAAAMAAHHAQHLPPGFLPALPFPFAAAAAAGAAAQERGHFRFADSELQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRNDDSMSEDRIAHILNEASTLMKNSGPNALQEQQRRSSTLDETHSNDDSKSPPQTCTSPFYKEQLKQQQQQQQQTHEALQQQQQHRLRQEDLVQDKMARIYQEIMARAPREAAFPSFLLSPFLGAAGGMPGAAANAFPAMAADENIRLAFEREMAKLQQQQQQQQQQQPPNFPNFSSLMALQQQVLNGAQDLTLTKDIKDIKVNGQRNSLDHSQNSMDATMNAMKESNSNSGGPTGLGGDAERHGVFPLHVRKSDGGCLTPAPPAPPTSNASAQHTNSAAASPLSNSILPPALSQTAEEFAATASPLQRMASITNSLITQPPVTPHHSTPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLANKMQAAALPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQQQQVQSQQQHAAVQAAQAAAAAAAHHQNMLLTSPGLPPQHAISLPAGNGGPGGAGGVGAVDKKPMMMPVHASHQPNAMRNMHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDSNNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVSGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGQPGADNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAAGAGENELQALNQAFKEQMSGLDLSMSTLKRERTDDYQDDMDESHVSDNESLEGDDKSASSDYKDALQKSALAAAAYLSNAARSSRRKPAAPQWVNPAGSAATNAAAAAAAGVPVGVGIVGDNERIINGVCVMQQSEYSRGDDGANVEAQTEKSIVGGGVGGVEHAGSEADNEHAHLDIDQSFMEPEVRIKQEEEDEDDDCGSEGGADAAQLNATAVAAAAAAKEDKIKVITEEKLRMVRVRRMSNDDDESTQQQQQQQQSATAATTAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01195894;
90% Identity
iTF_01195172;
80% Identity
iTF_01195172;