Preg014876.1
Basic Information
- Insect
- Phormia regina
- Gene Symbol
- fil1
- Assembly
- GCA_001735585.1
- Location
- MINJ01030058.1:389-1462[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6e-17 1.4e-13 51.2 5.5 1 35 151 185 151 186 0.96 2 2 3.8 8.9e+03 -2.6 2.1 1 29 209 236 209 240 0.74
Sequence Information
- Coding Sequence
- ATGACAGGAAGAAATCAAAATAGTGATATAATCAAATCATTCGAAGAAGATTACAAAGAAAACGACATGTTTGGGCAGGAAAATGGTGATAATAGCCCAAACTTGACACGTATAGGCAACGATGCCGCGAGTGGCGATTATCTTAGCGATGATGGCACACTAAAAAAACACAAGTACCGGTCTGAAAGCCATCACACAGTGTATGAAGACAGAAGAGCTTTGAAAGCGAGATGTTTTAGCTACAATAGCCAAGAAAATGACATCCTGACCATGTCAAGGTCAGCACAGTATGACAACAGCGCATCACATCAATGGTTGTTCCAAAACGGTTACTATGGGAAATTTGACACAAGATTCCAAAATCACAGCAACCACTCTGCCAGTCTCAAAATGTCTGATTACGTTAGTCTTGACACGGatgttgtaaagaaaaaaagtaaagtaaaaatttgttctaaTTGCCAAACGCAGGAAACACCATCTTGGAGGCGCAGCATGGATAGGAAAAGCTTGTTATGCAATGCATGTGGTTTGTACCAACGACTGCATAACAGGCCAAGAccttttttcaagaattttgacGGTAAAACAAGAGCTATCAAGCCGACCTCATATGTCTATATATGCCACGGTTGCAACAAAGTGAGTAAGATAAGTTGGAAATGGACTTTGGATGGAAAACAGATTTGCGATTACTGTAGCTTCTATCACAACGAGACCACGAATAATGatgaaatcaaaaaatatgtatctatAAACGATACTGGATACCCAAAAAATTATCACTCTAATGTGCAGAGTAGTGATGACTTCATCTACAAACTCCACCTGCCGAGTGCAGGCGATAACCTTTACCGCAGTAAGAGTCATACATCCTTTGATTATGACGCTGGTTTAtgccaaaatcaaaaattcgatTATAATGCTAATGGAATGTACGAGGGAGTCAAAGGATACAGTAGCATGGACATGTATAGGCTCAATGAAGAGTATAACAACCAAAACAAAAACGATGCTGATGATATTGATTATGCGGGGGATAATTTGACTTCTTGctcatttaaaaatcattaa
- Protein Sequence
- MTGRNQNSDIIKSFEEDYKENDMFGQENGDNSPNLTRIGNDAASGDYLSDDGTLKKHKYRSESHHTVYEDRRALKARCFSYNSQENDILTMSRSAQYDNSASHQWLFQNGYYGKFDTRFQNHSNHSASLKMSDYVSLDTDVVKKKSKVKICSNCQTQETPSWRRSMDRKSLLCNACGLYQRLHNRPRPFFKNFDGKTRAIKPTSYVYICHGCNKVSKISWKWTLDGKQICDYCSFYHNETTNNDEIKKYVSINDTGYPKNYHSNVQSSDDFIYKLHLPSAGDNLYRSKSHTSFDYDAGLCQNQKFDYNANGMYEGVKGYSSMDMYRLNEEYNNQNKNDADDIDYAGDNLTSCSFKNH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -