Preg004702.1
Basic Information
- Insect
- Phormia regina
- Gene Symbol
- SFU1
- Assembly
- GCA_001735585.1
- Location
- MINJ01092447.1:1-1168[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.7e-09 2e-05 25.1 0.3 1 19 212 230 212 232 0.94 2 2 6.5e-18 1.5e-14 54.3 3.3 1 36 298 332 298 332 0.97
Sequence Information
- Coding Sequence
- atgtcTGTTGACGTAACATCCTCGGCAACAATTTCAACTAACTCAGCTTCGTCATTTAATANNNNNNNNNNNNNNNNTGAGCACCAAAAACCAGAAGATCTAAATCCAACCAGTAAATCCTCGttaatggaaaataataaagcCAATGATTCCCAAATAACACCAATCAAACAGGCAAAAAACAGGTCACCGCAAACTGAGCAATCTAGGACTGAAACTGACAAAAATGGGTCTCTTAATAGCAATACCTACAGTAATAATGTGAGTCCTAATCTAACAGTTTCGAAATCTGTTGAACACGAGAAACTGATTCATGAGGAGCATAGCAGTGCGCCCGCCACGGCCCCTAATTCGGACACGAACTCGTCCAATTTTAACCAGCGAGCGCCAATAAACCAACAGGGCGATGAACCCAAAACCAATAACCAAGATCCTACACCTACACCTGCATCTGCTACTCCTAACGGCTCGGAATCTGTTAGTTTGCAATCCCTACCTAAATCACAATCCGAACCAGGAACCCCCCCAGATTCTGCTCAAAATGGTGAGTTGTCGGCCAGTAGTGGTTCAAAAAGCCCATCAGATACCAAGTCTCTTAAAATTGGATCTAAAGTGAGTGGCACTGACCATAGTTGTGCTAACTGCCTGGTCACCAAAACACCACTTTGGAGACGCGGTCTTAACGGCCAGGTTTNNAATATTAACCGTCCCCTTACTTTACTCAAAACACCGACATTTAAGAAAGTCGCTGTGGAGAATGCTGATTGCCCTGGAAACGGCCAATGTACCGGCACTGGTGGTAGTGAGAGCTGTTTGAAGTGTCCCTCATACTTGAACAATGCTAGGAGGAACGGAAAGTTACCTAAAACCGGCGATGTTAATatgatttcatgtcaaaattGTGGAACCGTGAACACCCCCCTATGGAGAAGAGACTCACAAGGCCACGTAATTTGCAATGCCTGTGGACTGTATAATAGACTTCACCATGAAATGCGACCTATAGATGCAAATAGCTCGATTGTAAAACGCAGAAAACGCACTCACCAAGAGGAAGACGCTAAGAGGAGGTCAAATAACCAGCAGCCGGGTCATGTGCATACCGCCGATGCCAATGGTAACTTATGTTGTCCTCACATCAACCAGCCCCCCGGATCTGGTTTCTCGC
- Protein Sequence
- MSVDVTSSATISTNSASSFNXXXXXXEHQKPEDLNPTSKSSLMENNKANDSQITPIKQAKNRSPQTEQSRTETDKNGSLNSNTYSNNVSPNLTVSKSVEHEKLIHEEHSSAPATAPNSDTNSSNFNQRAPINQQGDEPKTNNQDPTPTPASATPNGSESVSLQSLPKSQSEPGTPPDSAQNGELSASSGSKSPSDTKSLKIGSKVSGTDHSCANCLVTKTPLWRRGLNGQVXNINRPLTLLKTPTFKKVAVENADCPGNGQCTGTGGSESCLKCPSYLNNARRNGKLPKTGDVNMISCQNCGTVNTPLWRRDSQGHVICNACGLYNRLHHEMRPIDANSSIVKRRKRTHQEEDAKRRSNNQQPGHVHTADANGNLCCPHINQPPGSGFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -