Preg025367.1
Basic Information
- Insect
- Phormia regina
- Gene Symbol
- rca-1
- Assembly
- GCA_001735585.1
- Location
- MINJ01135388.1:1103-2306[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-16 5.5e-13 49.8 0.3 1 46 76 122 76 122 0.98 2 2 3.5e-13 4.7e-10 40.4 0.0 1 43 128 170 128 172 0.96
Sequence Information
- Coding Sequence
- ATGATGCGGCCGTTGGAGATTATAAAGGCAACCCTTAACCTACACACACAGGTTCAAGATCAAATAGTTTCGCCGCCTTTAACTAATTCCGATGAATCTGCAAGCAATGCTTCCGAAGGGTATCAGCATTCGCCAACATCTAGCACCTCTCCGGGCATCGATAAGGATATTCCAGGTAAAGAATCTAATAGAAACATAAGTGAATTATCAGAGCCGGTGCTCAAACGAGGAGTTTGGTCTGCCGAAGAAGACGAATTGCTCCTGAGATTGATAAACAAAACTAAGCCTCTTAAATGGGTATCGATCGCTGCGGAAATGCGAACAAGAAGTTCAAAACAATGCAGAGAGCGATATCATAACTATTTAAAGCCGACGTTAGCCAAGGGTCCTATTACCGATGCCGAAGGTGCTAGGATTAAAGAATTGGTCGACATGTACGGCAAAAGATGGGCAGTCATCAGCAGACAGATGCCTGGTCGCTCTGATAACGCTATAAAAAATTGGTGGAACGCCCTAGCTAGTCGTAAGCGTACGGGAAAGCCAGGAGATGCCGAAGGAGCCCGGAGATCTCGCAACAGCCCGGGATCATCAAAGGTCACTATGGTTCAATGGGTACCCTCAGAAANNCCCTCAGAAAGAAATATGAGCCAATCAGGGGAAAGCACATCGAATCGGGCGCCGAAACAAGGTCCTGGTTATGACATAAATCAGGGACAGATGCACACACAACTTCAGCACATGCCACAGATTAACGCCCCATATCAAAACATGCAGCATTACCCAAATATGGGGTCAGCCCAGCAAATGACCATGGTCGGCCAAGCTCCATCGAGCGACATTCAGGCTCATCAAATGATGCATATGGCACATATGGCACAAATGACCAAAATGCTACAACTTCCTCCTCAATATCAA
- Protein Sequence
- MMRPLEIIKATLNLHTQVQDQIVSPPLTNSDESASNASEGYQHSPTSSTSPGIDKDIPGKESNRNISELSEPVLKRGVWSAEEDELLLRLINKTKPLKWVSIAAEMRTRSSKQCRERYHNYLKPTLAKGPITDAEGARIKELVDMYGKRWAVISRQMPGRSDNAIKNWWNALASRKRTGKPGDAEGARRSRNSPGSSKVTMVQWVPSEXPSERNMSQSGESTSNRAPKQGPGYDINQGQMHTQLQHMPQINAPYQNMQHYPNMGSAQQMTMVGQAPSSDIQAHQMMHMAHMAQMTKMLQLPPQYQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -