Preg025182.1
Basic Information
- Insect
- Phormia regina
- Gene Symbol
- kn
- Assembly
- GCA_001735585.1
- Location
- MINJ01043543.1:637-2960[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-119 4.6e-115 386.2 0.0 205 385 1 210 1 213 0.99 2 2 5.5e-10 1e-05 25.1 13.5 422 519 213 315 209 330 0.70
Sequence Information
- Coding Sequence
- ATGCGTAGATTCCAgGTTGTCATATCCACCCAAGTAAGTGTTGAGGGTCCTTTATTGGCCATATCGGATAATATGTTTGTACACAATAATTCAAAACATGGACGTCGTGCTAAACGTTTGGATACAACGGAAGGTACAGGCAATTCCTCTCTGTCCATAACGGGACATCCCTTAGCGCCTGACAGTACCTATGATGgtcTATATCCTCCTTTACCGGTAGCTACACCTTGTATTAAGGCCATATCACCGAGCGAAGGTTGGACTACGGGTGGAGCCACTGTTATCATTGTAGGTGATAATTTCTTTGATGGCCTACAGGTTGTATTTGGTACCATGTTGGTATGGAGTGAACTGATAACATCACATGCAATTCGTGTACAAACACCTCCCAGACATATACCCGGAGTGGTTGAAGTAACATTATCGTATAAAAGCAAACAGTTTTGTAAGGGATCTCCTGGGcgttttgtttatgtttCAGCCCTTAATGAGCCCACTATTGATTATGGTTTCCAAAGGCTGCAAAAATTAATACCACGTCATCCTGGTGACCCcgaaaaattacaaaaggaaattattttaaagagagCCGCCGATTTAGTGGAAGCTTTATATTCCATGCCTAGATCACCCGGTGGTTCGACCGGATTTAATTCATATGCTGGACAATTGGCCGTAAGTGTACAAGATGGTAGTGGCCAATGGACCGAAGACGATTATCAGCGTACACAATCAAGCAGTGTTAGTCCACGAGGTGGTTATTGCAGCAGTGCTTCGACACCTCATAGTTCTGGCGGAGGTTCTTATGGTGCTACAACTACGGCGGCCACAAATGGTTATGGTCCTACACCTAATATGGGCACTTTGTCCTCATCACCCGGCAGTGTTTTCAATACCACATCAACTTGTGCATTTTCGCCATTAATTCCAACAGTGTCCTCAACTTGGCATCAGGCTTTGGTACAACATCATCACTCGCATCCACACCACTACCATCATCCGCATCAGCCTTGGCACAATCCAGCCGTTTCAGCAGCAACAGCGGCcgtttaa
- Protein Sequence
- MRRFQVVISTQVSVEGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNSSLSITGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYAGQLAVSVQDGSGQWTEDDYQRTQSSSVSPRGGYCSSASTPHSSGGGSYGATTTAATNGYGPTPNMGTLSSSPGSVFNTTSTCAFSPLIPTVSSTWHQALVQHHHSHPHHYHHPHQPWHNPAVSAATAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01109082;
- 90% Identity
- iTF_00893648;
- 80% Identity
- -