Preg009329.1
Basic Information
- Insect
- Phormia regina
- Gene Symbol
- -
- Assembly
- GCA_001735585.1
- Location
- MINJ01163528.1:1-632[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7 9.1e+03 -1.9 0.0 5 33 56 70 54 82 0.56 2 2 1e-08 5.5e-05 24.5 0.0 5 89 116 200 112 200 0.75
Sequence Information
- Coding Sequence
- CGAGTACCTGCTAACCAGAATTTTCCTATTAACTCGAATCATGGAGCACCCCTGTTGAGCAGCGTCCCCCCTAACGGCAAGCCTAATGCTCCTATGCAGCAGCATCCGGGTGCACAACCGCTGAGAAACACCGATACTATAGATATCACACTATGTGTAGTTTCCTTTTATACCCAGTTGCTcaagtttaagacccaaaacGTGGATTTACTAAACGTCAGACGACATATCGAGAACTTCCCCTTCgaggataaaattaaaatggtaCAAAAATTCGAGTATTCACGCCAAGGATATTTCGCAGAAACCAGCAAAATGCCTGTTACCAGATTCCTCCCCCAAGTGTTCTTAAAGACAGTTTCCGATGTTTATGGCCAAATCCAAAGAGCTAATCCTAACAAAGATATCTTCGCTGGGGGCACCCTAATCCCGCTTTTGCGACTGTTCCAAGAGGTCCAGCTGGCTGGTGGTTTTTTAAATACCACATTATGGCAGCGCTGGCCTgcagttgttaaaaatttaggtGTAGCTGCACCTATCAATCTGGATGCTGTATTAGAAGTGATTGCTGGGTATGCGAACACACTGCTAATTTTCGAAGTTTATACTGAACAAAACGAGTCAGTTAGAA
- Protein Sequence
- RVPANQNFPINSNHGAPLLSSVPPNGKPNAPMQQHPGAQPLRNTDTIDITLCVVSFYTQLLKFKTQNVDLLNVRRHIENFPFEDKIKMVQKFEYSRQGYFAETSKMPVTRFLPQVFLKTVSDVYGQIQRANPNKDIFAGGTLIPLLRLFQEVQLAGGFLNTTLWQRWPAVVKNLGVAAPINLDAVLEVIAGYANTLLIFEVYTEQNESVR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -