Psen017254.1
Basic Information
- Insect
- Phoebis sennae
- Gene Symbol
- kn
- Assembly
- GCA_001586405.1
- Location
- LQNK01000575.1:625073-630005[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.4e-116 7.1e-112 374.7 0.0 218 387 2 188 1 197 0.99 2 2 0.11 1e+03 -2.3 0.0 542 555 304 317 199 326 0.45
Sequence Information
- Coding Sequence
- ATGGTAGACGGCCCACTTCTGGCTATCTCGGACAACATGTTTGTGCACAACAACAGCAAGCACGGCCGGCGGGCGAAGCGCCTCGACCCGACTGAAGGTACAGAGGCCGCCCTCGAACCTACTTCGGGATTATATCCACCGTTGCCAGTAGCAACGCCATGCATCAAAGCAATATCTCCTAGCGAAGGTTGGACTTCAGGGGGCTCGACCGTTATAATAGTGGGGGACAATTTTTTCGATGGCCTTCAAGTTGTATTCGGGACTATGCTTGTTTGGAGTGAGTTAATAACATCGCACGCAATAAGAGTTCAAACGCCACCGAGACACATCCCCGGCGTCGTGGAAGTTACGTTGTCCTACAAGAGCAAACAGTTCTGTAAAGGAGCGCCCGGAAGATTTGTTTATGTTTCTCTCAATGAGCCCACGATAGATTACGGATTTCAGCGGCTTCAGAAACTTATACCGAGACATCCGGGCGATCCCGAGAAACTACCCAAGGAAATCATACTGAAGAGAGCCGCAGACTTAGCAGAAGCGTTATACTCAATGCCTCGCAATAATCAATTGAGACACTGCAGCTTCGCAGTGGACGGAAGAAGAGTACGCGCGCAGCGNNNNNNNNCGGTGTCGCCGCGGTACTGCTCAGCCGCCTCCACGCCACACGCACCTTCCTACCCTCATCCGCAGCACTACCCCGCGCCGCCGACTTCGCTCTTCAATACCACTAACCTGTCTCTCGGGCCTTACCATCCAGCGAATATGAATGGACACTTACCGTCTGACTATCAACAATATAATACATATAACCAAAAAGATAGTGGCCATTACATTGAAAGAAACGTCGAGTCTAAAAACGACTGTCCCGCAAACACTCATACAAAATGCAACGGTGCTATGAAAGGGCAAACGGGTAAAGGGAACAAGAAAAGCGCTTTCGCGGTTGTCGTACAAAGCCCGCCGCGTTCCAATTTCCAACATCAGCAAAATTGGCAACATCTCGCTGTTCAGTGTTAG
- Protein Sequence
- MVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGTEAALEPTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLRHCSFAVDGRRVRAQRXXXVSPRYCSAASTPHAPSYPHPQHYPAPPTSLFNTTNLSLGPYHPANMNGHLPSDYQQYNTYNQKDSGHYIERNVESKNDCPANTHTKCNGAMKGQTGKGNKKSAFAVVVQSPPRSNFQHQQNWQHLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01193351;
- 90% Identity
- iTF_01193351;
- 80% Identity
- iTF_01193351;