Psen009539.1
Basic Information
- Insect
- Phoebis sennae
- Gene Symbol
- -
- Assembly
- GCA_001586405.1
- Location
- LQNK01000463.1:48950-51096[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.093 2e+02 2.6 0.0 40 85 96 141 87 143 0.73 2 4 0.0036 7.7 7.1 0.1 51 86 201 235 177 236 0.84 3 4 0.0068 15 6.2 0.1 49 83 290 323 272 325 0.82 4 4 0.00095 2 8.9 0.0 49 83 390 423 381 426 0.87
Sequence Information
- Coding Sequence
- ATGGATGTAAATAATACACATAACCAAAGTTATTGGTTTGTTGTACGAGAAGACCACAGCAATGTTATTTTTAGTAGTAACAACTTTACAATTCAGAATCCACAAATTGCAGGACAAGAAACTCGATTTATAGTCGATACAGGCGACAATCGTCAGTTTATGCAAGTTGATAGTATTCCCAATAGTCTTCAAGAAGAACCCACAAAAGATTCCTGTAAAGAAATTGATCGAACGAAAGATAGTGAAAACTTTTGGGATAGAAATAAAGTAAAACTTCTTTTAACGCTTAGTCACGAAAATGGATATAATGCTTCAGCCATTGATAAATTTGAATGGAATGAAATAGCACTTTTAGTTGGTACCACACCTGAAGAATGTGATAAAAAATTTCGGAACTTACGTCGAACATATATTAGATTAATGAAAAAGAAAATGATGGGAAAGGATATAAAATGGGTGCATTTCAACATTTGTGAAGAGCTATTCAAAGATTGTAAACTATTAACACCAACATTGGAGCCATGGGAAGACACAAAAGTGAGACAATTATTAACTCTTTACATTGATAATATTAATAAATTCAGAGATCCAAATTTCTTACAAAAGGATGTGTGGAAAGATATAGCTACACAATTAAATACTACAGAATACAATTGTTACCACAAATTCAAAAACTTAAAAAGAACTTATTTCAATTGGCTTGAAAGGAGTAGGGAAACAGGCAAACTTATAAAGTGGCCATATCATCATTATTTTGAAAGAATTTTTTATAACTATAATCCAGAACTCGGTCCTTGGGACAGGAATAAAATTAGACAACTTATAAATGCATATTCAGAAATATCACATATGTTTAGGAATCCCAAATATCAAAAGAAAGAATTGTGGAGAGAAATATCTAGAAAGGTTGGTGAGAGTCCCAGTAATTGTGACAGAAAGTTTAGAAATTTAAAGCAAACATACATAAGATTGAAGAGGAGAGCTGACACTGGCAGATCCATCACCAAGTGGCGGTATTACAAAGACTTTTCAACCATATTTGAAAATGAGACATATTCAATTGTTGACGATGGACTTGAAATAGTCTACAAATCTGCTGAACAGGACTACATCAAACAATTGTTAAATTTTTACATTGACAATAAAGAGAAATTCAGAGATCCTCTTGTTAAGAAAAAGAATTTGTGGAGAATGATAGGACCTAAACTTGGATTATCACCTGAGGAATGTGATAAAAAGTTTAGGAATTTGAAACAGACATATATAAGGTTGGCAGAGAGAAAAAGCTTGACTGGTAGGAAAAATGGCTGGCCATATTATTCCTATTTTGAAAGAATTTATGATGAACCAAAAATGAATGGAAAGGAATGTAACCACAACTGTAATATAGACAATGTAACACTTAAAGAAATCAGGAGTATTGTAAAAGATGCCTATGAAGTCAATGACAATGATAAATTTGAGAGATTAGTAAAAGTAATAGAGGAATCAAATGGTATACAGAGGGAAAGAAATAAAATTCTTCAGGCTCTACTGGAAAAGAAATGA
- Protein Sequence
- MDVNNTHNQSYWFVVREDHSNVIFSSNNFTIQNPQIAGQETRFIVDTGDNRQFMQVDSIPNSLQEEPTKDSCKEIDRTKDSENFWDRNKVKLLLTLSHENGYNASAIDKFEWNEIALLVGTTPEECDKKFRNLRRTYIRLMKKKMMGKDIKWVHFNICEELFKDCKLLTPTLEPWEDTKVRQLLTLYIDNINKFRDPNFLQKDVWKDIATQLNTTEYNCYHKFKNLKRTYFNWLERSRETGKLIKWPYHHYFERIFYNYNPELGPWDRNKIRQLINAYSEISHMFRNPKYQKKELWREISRKVGESPSNCDRKFRNLKQTYIRLKRRADTGRSITKWRYYKDFSTIFENETYSIVDDGLEIVYKSAEQDYIKQLLNFYIDNKEKFRDPLVKKKNLWRMIGPKLGLSPEECDKKFRNLKQTYIRLAERKSLTGRKNGWPYYSYFERIYDEPKMNGKECNHNCNIDNVTLKEIRSIVKDAYEVNDNDKFERLVKVIEESNGIQRERNKILQALLEKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00357207;
- 90% Identity
- -
- 80% Identity
- -