Psen009294.1
Basic Information
- Insect
- Phoebis sennae
- Gene Symbol
- Arid5b
- Assembly
- GCA_001586405.1
- Location
- LQNK01001406.1:18223-76832[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.2 1.3e+04 -3.3 0.0 39 52 198 211 197 221 0.79 2 2 1.6e-10 3.5e-07 30.6 0.0 3 62 320 375 318 384 0.87
Sequence Information
- Coding Sequence
- ATGGAAAAGCCTTCGTACAAGCTGGTGGGTTCACCATGTGGTCAGCACGGCCAGTACACCTTCTACAAAGCGCTGCGTCTCACCGGGCCGCTGGAGAGGATAATAGCGATTGGGGACTTCTTCTTCGTCAGGATATGGCAGGACTCCGAGCTGGTGTCCATTGGCGAGCTCCAACTCCTTTGGACGGACCGCGTCTCCGACCAAACCCTGGTCTCCCTGCGGCTCTACTTCCTCCCAGAGAACACGCCTGATGGGAGGGGGCAGCATGGACAGGATGAAGTGCTAGCGATCAACGACAAGGTGGTAGTCCGTGCGGAAGACCTGCTCTCCTGGGTGTGCTGCGGCAGCGGCTGGAGGTGGGGCCTTCGAGCAGTGTGGCGTGGAGCCTGCGCCCCTCCCACAGAGCCAAGGCACACAGCCCCCTTGCACCATACGAAACTGGACTTCAGCGATGTGGAGAGAGAAAAGAGTGCCATGACGGTAGACACAGACAGTCCAGGTGTGGTGGTGTTCTCCTACCCCCGGTACTGCCGCTACCGCGCGTTGCTGGCCCGCCTGGAGGGGATCCAGGCGGACTGGTTGCGGGACTCCTTGGTGGCTGCGCTGGGGGGTTACGCCGCGCCTACTAATAACACCAGGATATTGTATTGTAAGGACACCTTCGAATACCCTGAACTAGAAGGCCACGAGTTCGTCTGCAACCACCTAGCGCCCAAGCTGAAGGGTCGACCGCGTGGTCGGCGGCGGGCGAGAGCACGGTCACGCGACCATGACCACGACCCCGACCGTGACAGGGACTCGCGGTCGAGCGATAGTGACGTCACGCTGCCGGAACCAAGGACACCACGTAGAGTTTCCCTACGTAATGGCGCAGAGAAACAGAGTGAAGAAGAAGACGACACGGAGAACAGAGAAGATGAGAGAGATGATAAGAGACAAGAGGAGAATGCTAAAGACGAAGCGTTCCTAGAACAATTAAAGGAGTTTCATAAAGACAGGAGTTATATGAAGATAGCGCATACGAAAAATATATCCCTTCGCAAGTTGTACCTTCGTGTGCGTTCGTGTGGGGGCTATGAGGCGGCGTGTCGCGGTCGCGTGTGGAAGCTCTTGTATGGAAGTCTGGCGCCGAGAGCGCGGCGGCTGTATGAGAGGTAA
- Protein Sequence
- MEKPSYKLVGSPCGQHGQYTFYKALRLTGPLERIIAIGDFFFVRIWQDSELVSIGELQLLWTDRVSDQTLVSLRLYFLPENTPDGRGQHGQDEVLAINDKVVVRAEDLLSWVCCGSGWRWGLRAVWRGACAPPTEPRHTAPLHHTKLDFSDVEREKSAMTVDTDSPGVVVFSYPRYCRYRALLARLEGIQADWLRDSLVAALGGYAAPTNNTRILYCKDTFEYPELEGHEFVCNHLAPKLKGRPRGRRRARARSRDHDHDPDRDRDSRSSDSDVTLPEPRTPRRVSLRNGAEKQSEEEDDTENREDERDDKRQEENAKDEAFLEQLKEFHKDRSYMKIAHTKNISLRKLYLRVRSCGGYEAACRGRVWKLLYGSLAPRARRLYER
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -