Basic Information

Insect: Phlogophora meticulosa
Gene Symbol: -
Assembly: GCA_905147745.1
Location: LR990547.1:2649654-2662653[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.3 1.2e+02 4.1 0.6 1 23 206 229 206 229 0.92

2 14 0.052 4.7 8.6 0.3 1 23 321 344 321 344 0.94

3 14 1.8 1.6e+02 3.8 0.5 2 21 382 401 381 402 0.93

4 14 2.3 2.1e+02 3.4 1.6 1 23 407 429 407 429 0.94

5 14 3.3 3e+02 2.9 1.9 1 13 676 688 676 696 0.74

6 14 0.01 0.95 10.8 1.3 1 23 712 734 712 734 0.93

7 14 6.6 6e+02 2.0 1.2 3 23 741 761 739 761 0.91

8 14 0.17 15 7.0 0.9 1 21 784 803 784 805 0.74

9 14 0.0022 0.2 12.9 0.2 2 23 884 905 883 905 0.97

10 14 4.9e-07 4.5e-05 24.4 2.7 1 23 911 933 911 933 0.99

11 14 0.00017 0.016 16.4 0.9 2 23 939 960 938 960 0.96

12 14 0.022 2 9.8 1.7 2 23 967 989 966 989 0.93

13 14 0.19 17 6.8 0.1 1 20 996 1015 996 1016 0.93

14 14 0.00011 0.01 16.9 1.1 3 23 1028 1049 1027 1049 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.3	1.2e+02	4.1	0.6	1	23	206	229	206	229	0.92
2	14	0.052	4.7	8.6	0.3	1	23	321	344	321	344	0.94
3	14	1.8	1.6e+02	3.8	0.5	2	21	382	401	381	402	0.93
4	14	2.3	2.1e+02	3.4	1.6	1	23	407	429	407	429	0.94
5	14	3.3	3e+02	2.9	1.9	1	13	676	688	676	696	0.74
6	14	0.01	0.95	10.8	1.3	1	23	712	734	712	734	0.93
7	14	6.6	6e+02	2.0	1.2	3	23	741	761	739	761	0.91
8	14	0.17	15	7.0	0.9	1	21	784	803	784	805	0.74
9	14	0.0022	0.2	12.9	0.2	2	23	884	905	883	905	0.97
10	14	4.9e-07	4.5e-05	24.4	2.7	1	23	911	933	911	933	0.99
11	14	0.00017	0.016	16.4	0.9	2	23	939	960	938	960	0.96
12	14	0.022	2	9.8	1.7	2	23	967	989	966	989	0.93
13	14	0.19	17	6.8	0.1	1	20	996	1015	996	1016	0.93
14	14	0.00011	0.01	16.9	1.1	3	23	1028	1049	1027	1049	0.97

Sequence Information

Coding Sequence: ATGGCAGACACGTCCAGAAAACGATCGCGAAAGTCTAAATTAGTGCCGCGAGAGTGTTTCATAGGCGAAGATGAACTTGTATTGCAGCTCCACCAACCGGATATATCAGAAACAATGAAGCATAAAACAAAAAGAATATCAATACCACCCGAGAAAACCACTACAAAACCAGTCGTTGTGTGTAACACAAACATCCTGCAAAGAATCAATGCGGCAACCAGAGATGACAGAGACGACGTCCTTCCTTCCATAATTAAAAAGACTTCACCAAGAAAGTTCGAAGTTGACATACAAGTAGAATCTTGTGATGACGAAGACGATAATGGCGAACTATACCATCTAACACCAATCAATAAAAACCCAATTACAAAGAAAGTACTACGTCCAATGCCTATCACTCTGTCTCTTGACCTCGTACTAGATGCAGCCGACAAAATACTCGAGACCTCAACCAGCATTGCTGATAAATATTTGGATATCTACGTAAGAAACACGGTAGGTTTTGAAGATACACCGAAGCTCGTACTGAACAATCATGAAGCTCGTATCCAGACAGCATTAGTCGAATGGAGAAAATGGCAGTTCCGCAGTTTCCACAGAGAAGAGCCGTTATTCTACAAATGCTACATATGCACAAGATCTTGGTGGTATTTATCGGATTTCCGTGATCATATGGCGAGACTGCATGGTGATGATACGAGTATTACCATCGTTCTGGAGAAGTACGAGATGCATGAAATCAATTTGATAGCCTATCACAAAAGGCTGGTGGTAATCAAGGATATATACACAGAAGGGCTTTGTTACCGATGTGGCAAGGACTATGCTGCCCACGAATTGAGTTTGAGGCATCAGGAGAAGTTTTACAAGAACGAGGGTTGTACAAGAGAGTTCTTCTGCTGCATGGGTCTTAGAGACCATCTGCCGGGCTGTCCTTTGTGCAAGGTCCAGGATAAGCCGTTCAAATGTGACATTTGTAGATCCAGATTCGATAGTCAAGATGAAATTGGGAAACATTTAATACTGTCTCACTCTGTAAGGTCTGATATACCGATAATGACTCGGTATAAGGTCTGTAAGCGTTGCTCAGAACGGTTTATGTGTGGTTATGTACACAGGTGTGCGCAGAAAGGTCCTCTGTTGGAGTGCCCGAACTGCTTCCAGTACTTCTTAAACGCAAAATCGCTGGAACTCCATTTGAAACATTCTATCAAAGGGTTTTCGTGCAAGGTTTGCGGTGCGGAGATGACGTTTAGCTGCAAGATTTATGAGCATATGTTGACACACACAGATAACTATATGATTGTAAGGAAGTGTTTGCCATGTGACGGTTTGAATATTTTCATTAATAAGGAGGATGCTGTTGCACACCGTTCATTGAAACATGAAAATACGAAACACCAAAAGTATTATCCTAAACTTCTAGTACCGTCGTCCTGCGTATATAAGCGCTTAGCTGAATCTGAATCGATACAGCTAGAATTGCTACCGATAGAACACGTGTCCGTACCAGAAGAAGAAATATCGGTACCAGAAGAAGAAATATCGGTACCAGAAGAGAAAATATCGGTACCTGAGAAGTCGGTACCGGTAACTAACCGTGAATTAGTTCCAGCAAACAAACGGACAGACGCACCGGATTATATAATGGATAATGTAATTGTTAAAGAAGAGCCAGAGGACTTAGATGATAGCCCAATACTTGTAATAAAAGAAGAACCAATAGATGATTTCCAACAACAAACAGACTTCGAAGAAAATGGAATGGAGCACTTGGGACAATTAATGGACGTGAAAGATGAATTTATAGAGGAGGTAGAAATTGTTTCAGAAAACTACCACGTGGACGTCGATATAGAAGATTTATTACCAAAAGAGGAATTTGATGAAGACACCGAATCTGTTGATATCCAGGAAATGGAGAATGATGGGACTTCTAAAGGACCTCCACAACCATTGGCAGGAGAAGAGTCTGTGTCAAATCCAGATGATTTGCTGGTACCGCCTACCCAATACACCAAGTCATACCGATGCAAGAAATGTGGTTTTACAGCGGCACATAAAGAATATAAACATCATATAAGCAAAGAATGCAAGAAATTTAAAGGGAAATCTAAGTATATGAGACAATCCTATTCTTGCTCAAAATGTGATAAAGTATTTCCTAATATGAAAAGATATTTAATACACTTTCAAGAACACGGGTACGATTACATGTGTTGCCCGGAGTGCTTGTGTCGATATCCGTCTTACACGGCTCTGGGTAACCACGTCTATGCTCACGTCAAACATACCTTCATAAGGGTTAAGAAGATCACGGAATCCGGCAGTGCAATATCTAATCCGGATTATAAGTGTAAAAAATGTGGTAAAGTCAGTCAGGATATAGATTTTTTTCAGCATTGGGAGCTGCATATCAATGCGAATCCTTCTCATCCCATGATGGTGACCTCCAGACCTCAGACTTCTCAGAAACATGGAGAATTGCATGAAACTATAATAAAGGACTGTATCGCCCAGCTAAGCAAGTTCCCAAAAGAATGCAACCACTGCCATCACAAATTCAACAGAATAAACGAATGTAAAAGACACATAATTGAGCATTTACTAGCGGACGCTTACACCCAGAAACATCTCTACAAGGAACTGAAATGCCAGATCTGCGACTCCGGGTTCCCTGTACCGGAGAAATATAAGCAGCATATGCGAGACCATGCTTCGTTGCCGGTGTACAAATGTGAATTGTGTGACCGAACGTTCAGTGACTCCAGCAACTTCACAAAGCACAAGAAAGTTCATAATTTAAAGGTTTTAGTCTGTGATATATGTAACAAGAAGTTTCAATCCAAATTGTCGCTGTCGAAGCATATTGAGAAACATGAAACCACAAAGCCGATCACCTGTAAGCCCTGCAACAAAGTGTTCTTTTTCCAATCTGCGTACCGTCGCCACGAAAAGTACTTCCACGAGAAGATGACAATAGGATTCCGTTGCGTCATCTGCAACGAGAGGTTTGAAAGTCTCAAGACTAAATGGGACCACATGTGGGAGGTCCATAATGAGAGGAAGCAGAAGGCAGACTGTCCCATATGCCACCGGTCGTTCAGGAAGTACTCTGATGTACGTGCTCACGCCAAGACTGACCACTTGATGGAAGTGTCAGTGATAAGTGTAAAGGATACGAAAAAGATAAATATTAATAGGTATTTGAAATCTGCCGCCTCCATTAAAGTTGGTAGGGTTGAGACTTTGGTTGTTTACGATTCTGAATGA
Protein Sequence: MADTSRKRSRKSKLVPRECFIGEDELVLQLHQPDISETMKHKTKRISIPPEKTTTKPVVVCNTNILQRINAATRDDRDDVLPSIIKKTSPRKFEVDIQVESCDDEDDNGELYHLTPINKNPITKKVLRPMPITLSLDLVLDAADKILETSTSIADKYLDIYVRNTVGFEDTPKLVLNNHEARIQTALVEWRKWQFRSFHREEPLFYKCYICTRSWWYLSDFRDHMARLHGDDTSITIVLEKYEMHEINLIAYHKRLVVIKDIYTEGLCYRCGKDYAAHELSLRHQEKFYKNEGCTREFFCCMGLRDHLPGCPLCKVQDKPFKCDICRSRFDSQDEIGKHLILSHSVRSDIPIMTRYKVCKRCSERFMCGYVHRCAQKGPLLECPNCFQYFLNAKSLELHLKHSIKGFSCKVCGAEMTFSCKIYEHMLTHTDNYMIVRKCLPCDGLNIFINKEDAVAHRSLKHENTKHQKYYPKLLVPSSCVYKRLAESESIQLELLPIEHVSVPEEEISVPEEEISVPEEKISVPEKSVPVTNRELVPANKRTDAPDYIMDNVIVKEEPEDLDDSPILVIKEEPIDDFQQQTDFEENGMEHLGQLMDVKDEFIEEVEIVSENYHVDVDIEDLLPKEEFDEDTESVDIQEMENDGTSKGPPQPLAGEESVSNPDDLLVPPTQYTKSYRCKKCGFTAAHKEYKHHISKECKKFKGKSKYMRQSYSCSKCDKVFPNMKRYLIHFQEHGYDYMCCPECLCRYPSYTALGNHVYAHVKHTFIRVKKITESGSAISNPDYKCKKCGKVSQDIDFFQHWELHINANPSHPMMVTSRPQTSQKHGELHETIIKDCIAQLSKFPKECNHCHHKFNRINECKRHIIEHLLADAYTQKHLYKELKCQICDSGFPVPEKYKQHMRDHASLPVYKCELCDRTFSDSSNFTKHKKVHNLKVLVCDICNKKFQSKLSLSKHIEKHETTKPITCKPCNKVFFFQSAYRRHEKYFHEKMTIGFRCVICNERFESLKTKWDHMWEVHNERKQKADCPICHRSFRKYSDVRAHAKTDHLMEVSVISVKDTKKININRYLKSAASIKVGRVETLVVYDSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -