Pmet029149.1
Basic Information
- Insect
- Phlogophora meticulosa
- Gene Symbol
- ZNF131
- Assembly
- GCA_905147745.1
- Location
- LR990543.1:1065317-1073399[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.0053 0.49 11.7 0.1 1 23 214 236 214 236 0.98 2 12 0.0017 0.16 13.2 6.0 1 23 242 265 242 265 0.94 3 12 3 2.8e+02 3.0 1.7 1 20 277 296 277 299 0.69 4 12 0.012 1.1 10.6 5.7 1 23 550 572 550 572 0.98 5 12 0.0012 0.11 13.7 1.8 2 23 578 600 577 600 0.96 6 12 0.0001 0.0094 17.1 0.7 2 23 609 630 608 630 0.96 7 12 0.00031 0.029 15.6 0.7 2 23 634 655 633 655 0.97 8 12 0.056 5.1 8.5 1.4 2 23 669 691 668 691 0.96 9 12 0.00081 0.074 14.3 2.4 1 23 697 719 697 719 0.98 10 12 0.0038 0.35 12.1 1.9 2 23 726 747 726 747 0.98 11 12 9.1e-05 0.0083 17.2 0.2 1 23 753 776 753 776 0.97 12 12 0.0015 0.13 13.4 3.1 1 23 780 803 780 803 0.95
Sequence Information
- Coding Sequence
- ATGGAAGAAGACGATATTTTTTCGGTCTTGTGCCCGAAAAAAACGTATGCAAAACCATATAAGGTGACAAATACAACATCAAAGTCTAATAATGAGGAACAGACCTCTAAAACAGCGGGAAAGGTCTACGATCCTGGTGAACCCTTGACTACTAAAGTTGCTATGGAATATTTGCTGAATGGGAAGCTAAAAACGAATGTATGTCGTTACTGCCTAAAAGTAACAGTAGCGATGTCTGAACTGGATCAGATACTGCAGATAGCTGGCACAGGAGTCGTGTATAAAGTCACTATAAGAGATATTATAGCTTCTTTTTATCCATTCAAGATTAAACAAGAAGAAAACTTCCCGGAGAAAATATGCCAGAGGTGCCTAGACAAAGCTCTCAATGCATACCTCTTCACACAGCAGTGCGAGCGAGCAGAAAGAGCTTTGCACAACTGTTTTGAAGATGTTAATGAGAAATTTAGTAAACTAGATCCTGTTAATAGACCAAAAAAGAGAGGACGGCAAAAACAAAACCCAAACTTTAATAAAATATATGTGGAACATCAAAAAGTAATGGATTATGCTGAACCAATACGAAACATCATCAATTTACAAACAGAATCTTTGAGTAACGAACCAGATTGGAATGAATTTGAATGCAAAAAGTGCTGGCAAGTTCTCCCGAACTTAGAATCATTGCTGAACCACGAGCAAATGCATCCGAAATACATGTGGTATCATTGCCGATTATGCGGTAAATCATTTGTAAAACATAACCAGCTGAAGAAACACTTTAACCAGGTCCATGTCCGAGGGGTTAGCAAAGCGGTAGACAAGACATTCAAATGCCATGAATGCGGAAATATAACAGAGAATTACGTAGAGCATCTACAACATGTAGAAAAACATAAGTTCAAAACTGTAATGAAACATATAATTGAGAAGAATACAGATAAATTATGTCTGGTTTGCCTAAAGAATAGTACGAATCTGGTGGATTTGGACAAAATGGTGTGCATCCATGGAAGTTGTCCGGAATTGGTTGGAGATACAACATTGTATAGAGTGCTATCTTCAACTTTAACTGAAATGACCTACCCACACGACTTCATTGGGACAAAAATATGCGAACTGTGCCTTAATCACGCCCTCACTTCATACATATTTATACACCAGTTCAATTTTACTAGAGAACGTCTAGATCTATGCATCAGTTTGATGTTGAAAAACCTTAACAATATGAAACCACACACGAACGTGTTTGTGCAAGTGTCGCCACCTTTAATAATGCCTACCCAAGATAATATGGATGAGTTAGATGATAATGATTTTATAGACGAAAATAAACTTGAAATAGATGTTCTAGAAGACGAGTTTAGGTTGAAATCTGAGAGTGAGAGTGAGGGTGAGAGTGAAACAGATATTGAAATCAAATCCGAGCCTTCTCCACCAGAAGACAAGTACGAGCCTCCTCAACAGGCAAAACGATTTAAATTCAATACAAATATTATCCCAGATATTGAGAACTTGGCTCGAAACGTAACTAAAACATATTCGAATAAAAAGTTGGTTAACGGCTTGCAGAGTTCTAAGTTCGATGTTTGCAGCGAATTTCTAACGTTCAACAAAAGGAAAGACGTTGAAAAGGTTGCTTTGAAATACACATGTCCTCTCTGTTGTAAACATTTCATATCAGAATACTTCTTGAAAAGACATATCCTTAAGCATGTAAACAGGAAAGTACCGTGCAAGATTTGTCATTCTGTCTTCAAATCAAAATTCTATTTGTATGAACACACAAGAATAACACATTTACTACAAGAGAGCTTTTATATGACGTGTAAAGTGTGCGGCAGGAATTTCACTGATACGGATAAGTTGCAAACTCACGAAGAAAGCCATAGGATTAAACCGTGTGAATTGTGTAATAAAGTATATATAGCCCAATCTCATTATGAGAATCACATCCAAAGGCACGCGTTCAAGCTGAAGCTTCTAAAACAAAAGCAGACTCAAACATGCAGTTTCTGCGAGAAGGAATGTTCAAATGATAATGAACTCTCTGTCCACGTAAACAAAATACATTTACAAATAAAACCGTATAGTTGCGATATGTGTGATAGACAATTTTACACAGAAACCAATATGAGGTACCATAAAAAGGTACATAGTATGCCTTCGAAGGAAACTTGCGAATTTTGTAAGCAAACTCTTAGAAATAGGAAACAGTTAGTGATTCATGTGAGGAAGCATATCGGGGCTAAACCTTTTTCCTGTCAGGTTTGTGGTCAGGCATTCTACTCGGCTGCCAAAGTCTGGAAACATATGAAAATATATCACGGTGGCAGATTCTGCTGTAGAATTTGTAAATCAGTTTTCGTAACCAAAAATGACCTTAAGAGACACGTGAGTAGAGATCATAATATAATTTAG
- Protein Sequence
- MEEDDIFSVLCPKKTYAKPYKVTNTTSKSNNEEQTSKTAGKVYDPGEPLTTKVAMEYLLNGKLKTNVCRYCLKVTVAMSELDQILQIAGTGVVYKVTIRDIIASFYPFKIKQEENFPEKICQRCLDKALNAYLFTQQCERAERALHNCFEDVNEKFSKLDPVNRPKKRGRQKQNPNFNKIYVEHQKVMDYAEPIRNIINLQTESLSNEPDWNEFECKKCWQVLPNLESLLNHEQMHPKYMWYHCRLCGKSFVKHNQLKKHFNQVHVRGVSKAVDKTFKCHECGNITENYVEHLQHVEKHKFKTVMKHIIEKNTDKLCLVCLKNSTNLVDLDKMVCIHGSCPELVGDTTLYRVLSSTLTEMTYPHDFIGTKICELCLNHALTSYIFIHQFNFTRERLDLCISLMLKNLNNMKPHTNVFVQVSPPLIMPTQDNMDELDDNDFIDENKLEIDVLEDEFRLKSESESEGESETDIEIKSEPSPPEDKYEPPQQAKRFKFNTNIIPDIENLARNVTKTYSNKKLVNGLQSSKFDVCSEFLTFNKRKDVEKVALKYTCPLCCKHFISEYFLKRHILKHVNRKVPCKICHSVFKSKFYLYEHTRITHLLQESFYMTCKVCGRNFTDTDKLQTHEESHRIKPCELCNKVYIAQSHYENHIQRHAFKLKLLKQKQTQTCSFCEKECSNDNELSVHVNKIHLQIKPYSCDMCDRQFYTETNMRYHKKVHSMPSKETCEFCKQTLRNRKQLVIHVRKHIGAKPFSCQVCGQAFYSAAKVWKHMKIYHGGRFCCRICKSVFVTKNDLKRHVSRDHNII
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -