Basic Information

Insect: Phlogophora meticulosa
Gene Symbol: -
Assembly: GCA_905147745.1
Location: LR990547.1:1450740-1472465[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0028 0.25 12.6 4.8 1 23 20 42 20 42 0.98

2 16 0.016 1.4 10.2 5.1 1 23 48 71 48 71 0.98

3 16 0.00024 0.021 15.9 10.8 1 23 77 99 77 99 0.98

4 16 0.00061 0.056 14.6 2.5 1 23 105 127 105 127 0.95

5 16 8.5e-05 0.0078 17.3 3.4 1 23 133 155 133 155 0.98

6 16 3.5e-05 0.0032 18.5 0.4 1 23 162 185 162 185 0.91

7 16 0.14 13 7.2 2.1 1 14 193 206 193 216 0.80

8 16 0.00032 0.029 15.5 3.1 2 23 223 243 222 243 0.98

9 16 6.9e-05 0.0063 17.6 1.0 1 23 249 273 249 273 0.91

10 16 0.00092 0.084 14.1 0.8 1 21 279 299 279 300 0.94

11 16 0.00011 0.0097 17.0 1.5 2 23 306 328 306 328 0.96

12 16 0.26 23 6.4 0.1 1 23 337 360 337 360 0.94

13 16 0.3 27 6.2 2.1 2 23 367 389 366 389 0.95

14 16 1.3 1.2e+02 4.2 10.4 1 23 721 743 721 743 0.92

15 16 0.68 62 5.1 0.5 2 23 754 774 753 774 0.88

16 16 0.01 0.95 10.8 0.9 1 23 900 922 900 922 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0028	0.25	12.6	4.8	1	23	20	42	20	42	0.98
2	16	0.016	1.4	10.2	5.1	1	23	48	71	48	71	0.98
3	16	0.00024	0.021	15.9	10.8	1	23	77	99	77	99	0.98
4	16	0.00061	0.056	14.6	2.5	1	23	105	127	105	127	0.95
5	16	8.5e-05	0.0078	17.3	3.4	1	23	133	155	133	155	0.98
6	16	3.5e-05	0.0032	18.5	0.4	1	23	162	185	162	185	0.91
7	16	0.14	13	7.2	2.1	1	14	193	206	193	216	0.80
8	16	0.00032	0.029	15.5	3.1	2	23	223	243	222	243	0.98
9	16	6.9e-05	0.0063	17.6	1.0	1	23	249	273	249	273	0.91
10	16	0.00092	0.084	14.1	0.8	1	21	279	299	279	300	0.94
11	16	0.00011	0.0097	17.0	1.5	2	23	306	328	306	328	0.96
12	16	0.26	23	6.4	0.1	1	23	337	360	337	360	0.94
13	16	0.3	27	6.2	2.1	2	23	367	389	366	389	0.95
14	16	1.3	1.2e+02	4.2	10.4	1	23	721	743	721	743	0.92
15	16	0.68	62	5.1	0.5	2	23	754	774	753	774	0.88
16	16	0.01	0.95	10.8	0.9	1	23	900	922	900	922	0.98

Sequence Information

Coding Sequence: ATGAGGGAGAAAACGAAGAAAAAAGGTGCTAAAACAAAATCTAGGCAAAAAAAAAGTTATACATGTCGACAGTGTCATAAGCAATTCGACAACGCCTCCAACTGGCACAGCCACGTGAAGCTCCACTCAACGGAACTGCCGTACCAATGCGAGCTGTGCGACTACAAATGCAAGATCAAGAAGTACCTCTCGCGACACGTGAAGAAAACCCACACGAAACCGACTGGCCACCAGTGTACTGAGTGTGGCAAATGTTTCCATTACTCTTGTTCGCTGAAAAATCATATGAGAGTTCATACGGGAGAGAAGCCACACAAATGCGAATTTTGCGACAAGGCGTTTAGCTCATTATACTCTTTGAATGGCCACAAGTTTATACACACAGGAGAGAAACCCTTTCAGTGTCAGTACTGTGACTACGCCTGCCGGGACAGCTCCACGATAAGGAGACACATGGAAAGACATTTAGGAGTTACCAAGAACTACCCCTGTTCCATATGTAATAAAAATTTTAAAAAGAAGGAGTCTTTACGAATACACGTGGACGAGATCCATTTCGAACTGGATACCAGGAAGCATCCCTGTGAGCATTGTGATAAAGCCTTCAAAACTGTAGGATCGCGCAATTGTCATGTTAATGCAGTCCACAAGCAAAATAATCGTGTCAAATGCGAGATATGCGGCCTTATCTGTACTAAGCACAATTTGCAAGCACACATGAGACGGCACATAGACGTCAGACCGTACAAGTGTAGCTACAGACCTTGTGGGAAGAGGTTTAAAGATAAGGGCGACCTGAAACGCCATCAAGTGATCCACTACCCAGAGAACCATCATGTGTGTACGGTGTGCAACAGACGATTCCCTCGGAAGTTCAGGCTTGCCAAACACATTCTGAACGGGTGTCGCCGAGCACAGTGTCACGACTGCGGACAGCTATTTTCAGATAAAAGATTTCTAGCTCGGCACATAAAGAATGCCCACGGACCTTATCCCAGATCCAGAGAGTATCTTTGCGACATCTGCGATTTGGTCACTTACAGCAGGCGAGGTATCATACAGCATCTGAAATATGGCCACGGAACTGAAAAAGACACAAAATGTCAAATATGCAAGAAGGATTATTTCAAATACCTCACATTGAAGGATCATTATTTGAGTAATCACAACCTCATATACAGATTATTAGAGAAAAAGAAAAAGGGTGTAGTTAAAATAAAACGCGAACCTTCAGAAGAAATAGAAGACATGGGTAACTCTTCAGATTTTATATACGAGGTCGGCATACAGAAGCAAGAAGTTGATGACCCACCGCTGCTTACCCTGCAACCGACAAGTCCCCAACACTTGGACGTCGACGCGGACACCATCACGTACTCCAAGAAAGTGCTGTCAGAAGACATATCACGCAGTCTGATAGAGCGTGATAGTGTGTCGAACGCCAACGATGACTTCTTCATAGGAAATGTGTTGAAGAAACCTGAGGTTTTTGATTTGCCAAAACAAATAGTTGATTTGCAGAAAAAGAAGCGGGTTGATAAGAGTTTAGAGAAACTTTTAAGCACAGTAAGGATACGCAAACAGTGTGTGGTTTTGGAGAAACTGCGTAGACAATATAACCGACGCATCAAAATGGCGACCAGCTGTGGGAATAAACCAGAACCAAAACAATCAATAAGATTTTTCAAAAAGCCTGATAATAATAATGAGACTGCTAAATTACAAAATGATTCCGATGCTGACATAGAAATCAATAGGAATGGTGATGAAATTAATGATGAAGAGATTGATGATGTTAACAAAGATAAAACTGATCTGGAAACAAAAGAAAAGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCAATTGATGATGAAAAAGACAGCGATTACAAAGACAGTGAATTTGAGAGCAATAGCGATGAAGAAACCAACCCGAACGGCAAACTTAAGTTCAATACACATCAGTGTTATGTGTGTTTTAAGCTCTTCAAAACAAAAACAGAATTAAAACGCCACTGTAAGCACCATTTCGATATATGCACCGAAAAAATGCTGAAAAAGTGCCCCTTCTGTGGATACGTAACCAATTCTACAATAACTCGACACATCAAGCTGGTACACAAGGTATCCCTCGACATCCGTTACGGTAGAATCAAAGAAAGAGACACGAAGAACGGTTCTAAATACGTCTTCGAAATAGACAAAGACTGCGATCTAGAAATCATCCCTAGCATAAGTAACCTCAACAAAATCGCGTCAATGAAAATCGACGAAAAGAATCGCACATCGAAAAATGTATTTCTGGGAACGACAAAATTGGTCAAAAAGGGCGGAGACTGGATGGTTCAAAAGCAAAAAGTCGATGTGAACAATCAGTATCTGTTACCGGAGTTCGCTAAAGACGATTATTTAGATTTAAAATCTATAGGAGATAGTTATTTAGAGCAAATAAGGTGTTTGAGTATTGTGGCTAAGAAGAAGGGGATCAAGATACTGTACCCGTGTGAGGGGTGCGATAAAATATGTCTCACATTAAGCGCTTTGAAGCTTCATAACCGAAAACATGAACTTAACCCCAAGAGATTTAAACCTAAGGTGTGGAAGAATAAGATTTTAAAAGGCATTGGCGGTCGTTACAGTCATGTCAACAAGAATAATAATAATAAAAAGAAATATGGCAATAATAATAAAAATGGTAGCGTTAGTAATGACAAAGGCGGTAGAAGTAATAATAATATTAATAAGAAAAGCCGTAAGTTAGAAAAGAATTGTACTAATAAGAGGGAAGCTTCAGAAGCAGTTGCCAATCGCTTTGCGGATCCAAATCCTGTCAGAAACAAACATAAATGTGACAAAAAACTTATAGAGTTCTATAAAAACAACATCAAAGGAGGCGATATAGAATTCTGGCAGTTTCTGAAGATTTTTAATAAGATGGGCCGTGAGAACGTCAACGATTTTAGTGACCTGGAGAATCGATACGATTTTGGCATGCATAAAATTGTTAATAATGAAGTTGGTGCTTCGGAGGACACAACTGTATCTAATAAAGAGGATATCGTTGATACTGCCCAGGTGATGCCCAAAAAAACTACTGGAATAAAGAAAAAAGCGTTCACAAGAGCCATTATGATAAGTAAGAAAGAGTATTTGAAAAGACTTGAAATTAAGAACCAAATGAGACAGCGGATATCTCGATCGGAATCTTAA
Protein Sequence: MREKTKKKGAKTKSRQKKSYTCRQCHKQFDNASNWHSHVKLHSTELPYQCELCDYKCKIKKYLSRHVKKTHTKPTGHQCTECGKCFHYSCSLKNHMRVHTGEKPHKCEFCDKAFSSLYSLNGHKFIHTGEKPFQCQYCDYACRDSSTIRRHMERHLGVTKNYPCSICNKNFKKKESLRIHVDEIHFELDTRKHPCEHCDKAFKTVGSRNCHVNAVHKQNNRVKCEICGLICTKHNLQAHMRRHIDVRPYKCSYRPCGKRFKDKGDLKRHQVIHYPENHHVCTVCNRRFPRKFRLAKHILNGCRRAQCHDCGQLFSDKRFLARHIKNAHGPYPRSREYLCDICDLVTYSRRGIIQHLKYGHGTEKDTKCQICKKDYFKYLTLKDHYLSNHNLIYRLLEKKKKGVVKIKREPSEEIEDMGNSSDFIYEVGIQKQEVDDPPLLTLQPTSPQHLDVDADTITYSKKVLSEDISRSLIERDSVSNANDDFFIGNVLKKPEVFDLPKQIVDLQKKKRVDKSLEKLLSTVRIRKQCVVLEKLRRQYNRRIKMATSCGNKPEPKQSIRFFKKPDNNNETAKLQNDSDADIEINRNGDEINDEEIDDVNKDKTDLETKEKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIDDEKDSDYKDSEFESNSDEETNPNGKLKFNTHQCYVCFKLFKTKTELKRHCKHHFDICTEKMLKKCPFCGYVTNSTITRHIKLVHKVSLDIRYGRIKERDTKNGSKYVFEIDKDCDLEIIPSISNLNKIASMKIDEKNRTSKNVFLGTTKLVKKGGDWMVQKQKVDVNNQYLLPEFAKDDYLDLKSIGDSYLEQIRCLSIVAKKKGIKILYPCEGCDKICLTLSALKLHNRKHELNPKRFKPKVWKNKILKGIGGRYSHVNKNNNNKKKYGNNNKNGSVSNDKGGRSNNNINKKSRKLEKNCTNKREASEAVANRFADPNPVRNKHKCDKKLIEFYKNNIKGGDIEFWQFLKIFNKMGRENVNDFSDLENRYDFGMHKIVNNEVGASEDTTVSNKEDIVDTAQVMPKKTTGIKKKAFTRAIMISKKEYLKRLEIKNQMRQRISRSES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -