Basic Information

Insect: Phlogophora meticulosa
Gene Symbol: -
Assembly: GCA_905147745.1
Location: LR990545.1:3686805-3707622[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 33 0.36 33 5.9 0.7 2 21 18 37 17 38 0.95

2 33 0.0078 0.72 11.2 0.1 1 23 117 140 117 140 0.93

3 33 1 93 4.5 0.5 2 23 169 191 168 191 0.92

4 33 0.43 40 5.7 5.7 2 23 214 235 213 235 0.97

5 33 7.1e-05 0.0065 17.6 0.9 1 23 239 261 239 261 0.98

6 33 0.39 36 5.8 2.6 1 21 266 286 266 289 0.89

7 33 0.2 18 6.7 3.7 2 23 297 319 297 319 0.93

8 33 0.00035 0.032 15.4 3.4 1 23 326 349 326 349 0.98

9 33 0.0061 0.55 11.5 6.4 1 23 355 377 355 377 0.98

10 33 1.8e-06 0.00017 22.6 1.0 1 23 383 405 383 405 0.99

11 33 6.9 6.3e+02 1.9 1.8 1 8 411 418 411 419 0.92

12 33 0.2 18 6.8 1.0 1 23 488 511 488 511 0.95

13 33 0.0063 0.57 11.5 0.1 1 23 611 633 611 633 0.96

14 33 0.93 85 4.6 1.8 1 23 638 661 638 661 0.93

15 33 6.4 5.9e+02 2.0 0.2 2 22 669 689 669 691 0.78

16 33 0.00011 0.0098 17.0 0.7 1 23 698 721 698 721 0.97

17 33 6.6e-05 0.006 17.7 4.2 1 23 727 749 727 749 0.98

18 33 2.2e-06 0.0002 22.3 1.2 1 23 755 777 755 777 0.99

19 33 3.4e-07 3.1e-05 24.9 0.2 1 23 783 806 783 806 0.97

20 33 0.0016 0.15 13.3 2.9 1 23 878 901 878 901 0.95

21 33 6.7 6.1e+02 1.9 0.1 2 23 929 951 928 951 0.90

22 33 0.0057 0.52 11.6 1.4 1 23 1049 1072 1049 1072 0.97

23 33 0.0018 0.16 13.2 0.5 1 23 1172 1194 1172 1194 0.97

24 33 0.54 49 5.4 1.3 1 23 1199 1222 1199 1222 0.94

25 33 0.0067 0.61 11.4 2.4 1 23 1294 1317 1294 1317 0.94

26 33 0.55 50 5.3 5.4 2 23 1389 1410 1388 1410 0.97

27 33 0.00087 0.079 14.2 0.4 1 23 1414 1436 1414 1436 0.96

28 33 0.02 1.8 9.9 1.3 1 23 1441 1464 1441 1464 0.97

29 33 0.0019 0.17 13.1 1.5 1 23 1471 1494 1471 1494 0.96

30 33 0.0035 0.32 12.2 0.2 2 23 1502 1524 1501 1524 0.95

31 33 0.00038 0.034 15.3 3.1 1 23 1530 1552 1530 1552 0.97

32 33 1.7e-05 0.0016 19.5 1.9 1 23 1558 1580 1558 1580 0.99

33 33 3.1e-05 0.0028 18.7 1.9 1 23 1586 1609 1586 1609 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	33	0.36	33	5.9	0.7	2	21	18	37	17	38	0.95
2	33	0.0078	0.72	11.2	0.1	1	23	117	140	117	140	0.93
3	33	1	93	4.5	0.5	2	23	169	191	168	191	0.92
4	33	0.43	40	5.7	5.7	2	23	214	235	213	235	0.97
5	33	7.1e-05	0.0065	17.6	0.9	1	23	239	261	239	261	0.98
6	33	0.39	36	5.8	2.6	1	21	266	286	266	289	0.89
7	33	0.2	18	6.7	3.7	2	23	297	319	297	319	0.93
8	33	0.00035	0.032	15.4	3.4	1	23	326	349	326	349	0.98
9	33	0.0061	0.55	11.5	6.4	1	23	355	377	355	377	0.98
10	33	1.8e-06	0.00017	22.6	1.0	1	23	383	405	383	405	0.99
11	33	6.9	6.3e+02	1.9	1.8	1	8	411	418	411	419	0.92
12	33	0.2	18	6.8	1.0	1	23	488	511	488	511	0.95
13	33	0.0063	0.57	11.5	0.1	1	23	611	633	611	633	0.96
14	33	0.93	85	4.6	1.8	1	23	638	661	638	661	0.93
15	33	6.4	5.9e+02	2.0	0.2	2	22	669	689	669	691	0.78
16	33	0.00011	0.0098	17.0	0.7	1	23	698	721	698	721	0.97
17	33	6.6e-05	0.006	17.7	4.2	1	23	727	749	727	749	0.98
18	33	2.2e-06	0.0002	22.3	1.2	1	23	755	777	755	777	0.99
19	33	3.4e-07	3.1e-05	24.9	0.2	1	23	783	806	783	806	0.97
20	33	0.0016	0.15	13.3	2.9	1	23	878	901	878	901	0.95
21	33	6.7	6.1e+02	1.9	0.1	2	23	929	951	928	951	0.90
22	33	0.0057	0.52	11.6	1.4	1	23	1049	1072	1049	1072	0.97
23	33	0.0018	0.16	13.2	0.5	1	23	1172	1194	1172	1194	0.97
24	33	0.54	49	5.4	1.3	1	23	1199	1222	1199	1222	0.94
25	33	0.0067	0.61	11.4	2.4	1	23	1294	1317	1294	1317	0.94
26	33	0.55	50	5.3	5.4	2	23	1389	1410	1388	1410	0.97
27	33	0.00087	0.079	14.2	0.4	1	23	1414	1436	1414	1436	0.96
28	33	0.02	1.8	9.9	1.3	1	23	1441	1464	1441	1464	0.97
29	33	0.0019	0.17	13.1	1.5	1	23	1471	1494	1471	1494	0.96
30	33	0.0035	0.32	12.2	0.2	2	23	1502	1524	1501	1524	0.95
31	33	0.00038	0.034	15.3	3.1	1	23	1530	1552	1530	1552	0.97
32	33	1.7e-05	0.0016	19.5	1.9	1	23	1558	1580	1558	1580	0.99
33	33	3.1e-05	0.0028	18.7	1.9	1	23	1586	1609	1586	1609	0.98

Sequence Information

Coding Sequence: ATGGATATCAAGAATAAGATTTTACTATACAAGTTTGAAAATGATTATATTCGCTGCTGCATTTGCCCTAGTAGTTTCCAGAAGTATCCAAAATTACAGGAACACATGAAGGCGTTGCGAGGAATGGTATACAGGATTCGTAAACAAGAAACAGTGAGCAAGAAAAGTGAAAGCAAAAACTTAGAGCCAGCTGTATTAGTTATCGTAGGACCTGAAAAGAAAACCAGATCAAAGGTAAATAAAACACCCAGATTGGTCGCGGGTATCTTGGAAAAGCATCGCCACAACCTCAGACAAATCCTTCAGTGGACTAACGCTACACCAATACTGCGTCGCGGAGGCGTGGGATACGCGTGCAGTTACTGTTTCGAAGAGTTCCCTGAGCCTACAGATCTAAAAGCGCATACACTTGAAAATCATACACCTAACTCAGATCCTACTATTGGATACTGTAAGAGCGCCCCCATGTCAGAATACTACATCAAACTAGACATCACCAACCTCAAGTGCACGGAATGTGATACCACCATACAAAGTCTCGAAAAAATAAAAACCCATTTGCAAGAAACGCATAAAGTACTTTTGTTCAATGACATTCAAAATCATATCATACCATTCGCATTTGAAACAGATACTCTTACTTGCTGCTTATGTCCCAATACATTCGACAAGTTTAAAAAACTACAGGAGCATATGCACACACATTACAGAAACTACATTTGCAAAGAATGCGATTCTGGGTTCGTTACCCAGGGTAGTTTCACCAGACACCGCAATACACACGTAAAAGGAGTCTTCCCTTGCAGCTACTGTCCAAAGATCTTTGACACGCTTGTGAAAAAGAGATCTCACGAGAGATGTAACCATACCCACACTGATGTGCTGAATAGATGCGGATACTGCAACAAAGGGTTTAGAGACTACCATTGTAAGGAACTACACATGTCCGAAGTCCACGGTGCTAAGCCAGCACTATACAAATGCAATGCTTGCGACAAGTGTTACGCCACTAAGCGTAAGCTAAGAATTCACGTAAAGCGAGATCATCTCTTGGAGAGGAGACACAAGTGTTTGACTTGTGACACGAGGTTCTTCTCTTCACACGACGTCAAGAAGCACATGCTAACTCACACTGGGGAAAGAGAATTCCAATGCGAGATATGTCTGAAGTCGTATGGAAGAAAATCCACTCTGAATAATCACATGAGGATCCATAACGACGATCGACGATTTAAATGTAACTATTGTGATAAACAAGAAACAGTCGCTACAACTACGAACATCAAAATAGAACAGGAAACTGAAGAAACAATAGTACCTAAGGAAGAGCGTATACAAATAAGGCCAGAGAAAGCGCCTCGTCCACGCAAAAAGCGACTGCTACACAAACATCTACACAATCTGAAAGTAATCCTAGAATCTACAAATGCCACGATGATACTTAAACATGGAGACAAAGGATATTTGTGTTGCTATTGCATAAAAGCGTTCCAAGAACCCATGAACTTGAAAGTACACACTTTAACGGAACATCAAAATGAAGAAACATTCTATGGCAACATAAAAGCCACTGGACCGTCTGTGTTCTTAGTCAAACTTGACATAACGAACCTAAAATGCCTTCTTTGCAGCGCCAGTATAGAATCTCTTGAAGATCTACTCGTCCATCTGACAGAGAAACACGATAAGACTATCCATGCTGATATAAAAAATCAAATATTCCCTTTCAAGTTCAATACGAAGCAACTGAAGTGCTGCCAATGTACAAGCGATGTGGCTTTCGCGACGTTCAGAGCACTACACGAGCATATGCACAAACACTACCGATACTTCGTCTGTAAAGACTGCGATGCCGGATTCATCAATCAGCTGTCACTATCTAGTCATAGCGTTACACACACGAAAGGGTCATTCGCCTGCCGTCACTGTCCTGTCGTATTTGACAACCTGTTCAAGAGAAGGAATCATGAGCTGCGTAGCCACAGTCAAACTGGAAGTTCCAATCGATGCAATTTCTGCAATGAAGGTTTTAGAGAATACATCGCAAAGGAATTACATTTATCAGAAGTTCATGGCGTTACTTCACGCAAGTATAACTGCACCGCGTGTGAGAGGATCTTTCGTACCAACAGTCTTCTTAACGCCCATGTCAGGCGATTCCATCTGATGGAAAAGAAACATAAATGTTCAGAATGCGACAAGGCATTCTTTGACCGTTGCGATCTAAAAAGTCACATGTTGGTTCATTCAGGGGCGAAAGATTTCAAATGTGAAGTCTGCTCTAAGTTTTTTGCTACGAAATCGGTTCTGACGCAGCATATGAGGATTCATAATAATGATAGGCGTTTTAAATGTCCAGTGTGTGATAAGGCGTTTGTGCAGAAACCTAGCTTGACCTGGCATATGAGGGCAAAGCATGATATACAAGAAAAATTCGCTACAACAACAAGCATCAAAATTGAGCCGATAGATGAAGACATTGTAGTATTTGAAGAAGAGCCTATACAAATAGATCCACAGACAATCCCTCGACCACGCATAAAACGACTAATGCACAAGCATTTACACAATCTGAAAGTAATCTTAGAATCAAGTAATGCCACGATGATATTCAAACATGGTGATAAGGGATACTTGTGTTGCTATTGCTCGGAAAGTTTCAAAGAACCCAAAAATTTGAAAGAGCACACTTTAACGACACATCAAAATGCAGAACAATTCTACGGCAACATAAAAGCCAAAGGGCCATCTAGGTTCTTAGTCAAACTTGACATCACTAACCTAAAATGCAATCTTTGCAGCACCAACATAGATTCTGTCGAAGATCTACTCGTCCATCTGACAGAGAAGCATAATAAGACCGTCTATACTGATATGCGAAATCAAATATTTCCTTTTAAGTTCAATGCGGAGCAACTAAAGTGCTGCCAATATAAACAAGCAAAAGTTGCATCAGCTACGAACATCAAAATAGAACTGAAAGCTGAAGAAACCGTAGCACCTAAGGAAGGGCGTATAAATGATAAGCCACAGACGGCACCTCGACCACGCATGAAGAGACTACTGCAGAAGCATCTAAACAATCTGAAGATAATCTTAGAATCTACGAACGCCACGATGATACTCAGACATGGAGATAAGGGATACTATTGCTGCTATTGCACAGAAGCTTTCCAAGAACCCATGAATTTGAAAATACACACTTTAACGGAACATCAGACTGAAGAACAATTCTACGGCAAGATTACAGCTAGTGGACCATCCAGATTCTTAGTCAAACTTGACATCACCAACCTGAAATGCATGCTTTGCAGCGCCAATATAGATTCTCTTGAAGATCTTCTCGTCCACTTGACAGAGAAACATGAAAAGAGCTTCCATACTGATATCCAAAATAAAATATTCCCCTTCAAATTTAATGCGAAACAACTGAAATGCTGCCAATGTACCAATGGCGTTGTTTTCGTCACATTCAGAGCACTACACGAGCATATGCACAAACACTACCGATACTTCGTCTGTAAGGAATGCGATGCCGGATTCATCAATCATATCTCCCTCTCCAGACATAGCATTACTCACACGAAAGGGTCGTTCGTCTGCCGACATTGTCCTGTAGTATTCGACAATGTATTCAAGAGAAGAAACCACGAAATGCGTGTCCATACCCACACTGGTGTGCCTCAAATCACTGTTGTGAAAACAGAAACGATCGACGTAGCACCTTCAGAAAATATAGTTGACACAAACGCAATAAACACTGAAAAAGAACTACCAAAAATAACACCCAGAACGGAATTGTTAAAACATCGAAGTAATATTAAAGAAGTCATTCTTAATTCTAATGCAACGCCCATAAGACGATATGGAGGGATCGGGTACACCTGCTGCTATTGTCCAAAGCAGTACCAACACCCTGCAGAGCTAAAGGAACATACCCTAGAGATCCACAAGAATATCTCAGAAGCAAACTTTATGAAGAGCATGAACATGTCTGAATATGTCGTCAAGTTAGACATAACTGCACTAAAGTGCAAGCTTTGCAACAGTGATATGGATTCTTTAGATAACTTTATAGACCATCTTCATAATGTACACGACAAAAAAATGCACATGGACCATAAGAGCCATATCTTCCCTTTTAAGTTCGATAGTGATTTAATGAAATGTGTTCACTGCTTGAATACCTTCAGTAAGTTCAGGACTCTTGTTAAACATATGCATATACATTACAGGAATTTTATTTGCACCATTTGTGAAACCGGGTTCGTGAACCGAAATTCTTTGACACAACACACGGAAAATCACAACACAGGGAAACATGTTTGTGGCTACTGTCCCAAGTTCTATCCCACTCAAGTTAAGAAGCGATTGCACGAAAGAACAGCCCACACCCACGTAAATGCTACATACAAATGTGGTTATTGTAAAGAAACCTTTAAAGATTATGGACATAAGGACGCACATATGGCGTCTGAGCATGGTGTTGTATCAACGACAGTTGTATGCCAAGCCTGCAACAAAGTATTCGCCAGTAGTAAAAGACTAAACATACATGTCAAAAGAGACCATCTGATAGAGAGGCCACACAAATGTAAAGAGTGCGAGATGACATTTTATTCCTCGACTGGGCTGAAGAGTCACATGGTCAAGCATACAGGGTTGAAGGAGTTTCAGTGTTCAGTATGCAAGAAGTACTATGGAAGAAAAAAGACTCTGAATGCTCATATGCGGATACATTCTGATGAGAAGAAGTTCAAGTGTGAAAATTGTGCGCAAGTCTTTACGCAGAAAAGCACTTGGAGGAGTCATATGAGATCTAAACACGGAGTAATTGTTTAG
Protein Sequence: MDIKNKILLYKFENDYIRCCICPSSFQKYPKLQEHMKALRGMVYRIRKQETVSKKSESKNLEPAVLVIVGPEKKTRSKVNKTPRLVAGILEKHRHNLRQILQWTNATPILRRGGVGYACSYCFEEFPEPTDLKAHTLENHTPNSDPTIGYCKSAPMSEYYIKLDITNLKCTECDTTIQSLEKIKTHLQETHKVLLFNDIQNHIIPFAFETDTLTCCLCPNTFDKFKKLQEHMHTHYRNYICKECDSGFVTQGSFTRHRNTHVKGVFPCSYCPKIFDTLVKKRSHERCNHTHTDVLNRCGYCNKGFRDYHCKELHMSEVHGAKPALYKCNACDKCYATKRKLRIHVKRDHLLERRHKCLTCDTRFFSSHDVKKHMLTHTGEREFQCEICLKSYGRKSTLNNHMRIHNDDRRFKCNYCDKQETVATTTNIKIEQETEETIVPKEERIQIRPEKAPRPRKKRLLHKHLHNLKVILESTNATMILKHGDKGYLCCYCIKAFQEPMNLKVHTLTEHQNEETFYGNIKATGPSVFLVKLDITNLKCLLCSASIESLEDLLVHLTEKHDKTIHADIKNQIFPFKFNTKQLKCCQCTSDVAFATFRALHEHMHKHYRYFVCKDCDAGFINQLSLSSHSVTHTKGSFACRHCPVVFDNLFKRRNHELRSHSQTGSSNRCNFCNEGFREYIAKELHLSEVHGVTSRKYNCTACERIFRTNSLLNAHVRRFHLMEKKHKCSECDKAFFDRCDLKSHMLVHSGAKDFKCEVCSKFFATKSVLTQHMRIHNNDRRFKCPVCDKAFVQKPSLTWHMRAKHDIQEKFATTTSIKIEPIDEDIVVFEEEPIQIDPQTIPRPRIKRLMHKHLHNLKVILESSNATMIFKHGDKGYLCCYCSESFKEPKNLKEHTLTTHQNAEQFYGNIKAKGPSRFLVKLDITNLKCNLCSTNIDSVEDLLVHLTEKHNKTVYTDMRNQIFPFKFNAEQLKCCQYKQAKVASATNIKIELKAEETVAPKEGRINDKPQTAPRPRMKRLLQKHLNNLKIILESTNATMILRHGDKGYYCCYCTEAFQEPMNLKIHTLTEHQTEEQFYGKITASGPSRFLVKLDITNLKCMLCSANIDSLEDLLVHLTEKHEKSFHTDIQNKIFPFKFNAKQLKCCQCTNGVVFVTFRALHEHMHKHYRYFVCKECDAGFINHISLSRHSITHTKGSFVCRHCPVVFDNVFKRRNHEMRVHTHTGVPQITVVKTETIDVAPSENIVDTNAINTEKELPKITPRTELLKHRSNIKEVILNSNATPIRRYGGIGYTCCYCPKQYQHPAELKEHTLEIHKNISEANFMKSMNMSEYVVKLDITALKCKLCNSDMDSLDNFIDHLHNVHDKKMHMDHKSHIFPFKFDSDLMKCVHCLNTFSKFRTLVKHMHIHYRNFICTICETGFVNRNSLTQHTENHNTGKHVCGYCPKFYPTQVKKRLHERTAHTHVNATYKCGYCKETFKDYGHKDAHMASEHGVVSTTVVCQACNKVFASSKRLNIHVKRDHLIERPHKCKECEMTFYSSTGLKSHMVKHTGLKEFQCSVCKKYYGRKKTLNAHMRIHSDEKKFKCENCAQVFTQKSTWRSHMRSKHGVIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -