Pmet026853.1
Basic Information
- Insect
- Phlogophora meticulosa
- Gene Symbol
- -
- Assembly
- GCA_905147745.1
- Location
- CAJHWW010000004.1:1509692-1511482[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.8e-12 9.2e-10 38.8 0.0 3 41 20 59 18 61 0.92
Sequence Information
- Coding Sequence
- ATGCCGAGGGTCTACAAAAGAAAACTAGGCGCTCGAAAATATGCTGACTACTCCAAGGAACAGTTGCAACTATGTCTGGCGGCTATTAAGTCTGGGCAAATGTCGCAGAGGAAAGCTAGCATAAAATTCAACATTCCGCGACGAACTCTAGTTTATAAAATTAAAAATGCCCATATGAATCGACCTGGTCAGCCTCAAATATTTACAGATGAGGAAGAGGAAGCCATAGCATCACATATTGAGATAATGGGCACTTATGGGTTTCCATTAACTGAGCACGACCTCAAAATTGTTGTCAAAATGTATCTCGAAAAATCTGGACGCATTGTTCGAAAATTTAAGAATAATGCGCCCGGAAATGACTGGGTTAAACAATTTTTGAAACGCCATCCTACCCTCTCAGTGCGTTTTGCAACAAATATTAAGAAGATCAGGGCAGCGTTATCAAAAGAGATTTTACAAGAGTACATTGAAAATTTATCACCACAAATTAGAGACATCCCTCCTACACATATATTTAACTATGATGAAACCAACTTAACAGACGATCCTGGCCAAAAACGAGTTATTGTTCGAAGGGGATGCAAATATCCTGAAAAAATCTGTAACGCGTCCAAATCGAGTACTTCGATCATGTTTTGTGGTAGCGCTTCAGGTGAGCTGATGCCCCCGTACGTAGTGTACAAATCGCAGAAGTTATGGGATACATGGACCGAGAATGGTCCCAAAGGATGCCACTATAGCAACTCTCCTTCAGGTTGGTTTGATCACCAGCTATTTTCAGATTGGCTAAAAAATCTTATGATTCCAAAACTTAAGAAAATGGAAGGCAAAAAGATGTTGATTGGGGATAACTTGGCTTCCCATTTATCGGTTGAAACACTGAGACTCTGTCGAGATAACGACATTGCTTTTGTGTGCCTGCCGCCAAATAGCACTCACATAACTCAGCCGCTCGATGTCGCGTTCTTTCGTCCATTAAAAGCCGAGTGGCGAAAAATTATAACTGAATGGAAGGAAAGTTCTGAAGGAACCAGAAACCCAACGATACCGAAACAAACTTTCCCGAGTTTGCTAAAGAAACTCTTAGAAAACATCGAGCCAAATGTGAGAAGCAACTTGAAAAACGGTTTCCGCAAATGCGGTATCTACCCCTGTAACGTGGATGAATTACTTGCGAGAATACCAGGGGCAATCGATGTAGACATCACAATAGTATCGGCATCTTTTATAGATCACCTGGAATCAAAGCGGAAGACAATCACAGAGTCTGGGCCAAAGAGACGTAAGAAGAAATTTGAAATCGCTGCTGGTAAAAGCATTGCTCATGAAGTATCGCTGTTAGAAGAGACTGAGAACGAAGAAGTTTTTGACGGCACAGAGGACAACATTGCCTCATGCTCAAGGCCACGCACTGGTTACGATTCGGACGCGTACTCATTACACGATGATTCAGATGATCCTGATGGTTGCTTTTTAGAGCCCAACAGCCCAGAGGAGAGTGATCATCCACCTCGACCAGAAACGAGATTCAAAGATGTGAAACGTGAGAAAGAGTCATTTGTGGTGGTAAAATATGATGAGAGACTGTACCCTGGTCTCATTATTGACTTCGATGAGAAAGGAGCTACTGTCGATGCAATGGCTAAGTCTTTAAAGTCCTGGAAATGGCCACAAAAAAAAGACATTAACTTCTATGAGTGGGAAAATGTCCTTGGGAGTATTGACCCTCCAAAAATTATATCTCGGCGAGGTTTTTTCAGCGTCAAAGAGCTTGACGGTATTGAGTAA
- Protein Sequence
- MPRVYKRKLGARKYADYSKEQLQLCLAAIKSGQMSQRKASIKFNIPRRTLVYKIKNAHMNRPGQPQIFTDEEEEAIASHIEIMGTYGFPLTEHDLKIVVKMYLEKSGRIVRKFKNNAPGNDWVKQFLKRHPTLSVRFATNIKKIRAALSKEILQEYIENLSPQIRDIPPTHIFNYDETNLTDDPGQKRVIVRRGCKYPEKICNASKSSTSIMFCGSASGELMPPYVVYKSQKLWDTWTENGPKGCHYSNSPSGWFDHQLFSDWLKNLMIPKLKKMEGKKMLIGDNLASHLSVETLRLCRDNDIAFVCLPPNSTHITQPLDVAFFRPLKAEWRKIITEWKESSEGTRNPTIPKQTFPSLLKKLLENIEPNVRSNLKNGFRKCGIYPCNVDELLARIPGAIDVDITIVSASFIDHLESKRKTITESGPKRRKKKFEIAAGKSIAHEVSLLEETENEEVFDGTEDNIASCSRPRTGYDSDAYSLHDDSDDPDGCFLEPNSPEESDHPPRPETRFKDVKREKESFVVVKYDERLYPGLIIDFDEKGATVDAMAKSLKSWKWPQKKDINFYEWENVLGSIDPPKIISRRGFFSVKELDGIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01118201; iTF_01192575; iTF_01531904; iTF_01076326; iTF_00637427; iTF_00147253; iTF_00147254; iTF_00363959; iTF_01564563; iTF_01564562; iTF_01491829; iTF_01491823; iTF_01491825; iTF_01491826; iTF_01491828; iTF_01491827;
- 90% Identity
- iTF_01076326;
- 80% Identity
- -