Basic Information

Insect: Phlebotomus papatasi
Gene Symbol: -
Assembly: GCA_000262795.1
Location: Scaffold107:257613-260443[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.41 16 5.5 0.4 2 23 307 332 306 332 0.88

2 9 2.9e-05 0.0011 18.6 1.2 1 23 364 386 364 386 0.99

3 9 0.0019 0.073 12.9 3.7 1 23 394 416 394 416 0.97

4 9 7e-05 0.0027 17.4 0.4 1 23 425 448 425 448 0.95

5 9 0.00022 0.0087 15.8 2.3 1 23 456 479 456 479 0.95

6 9 0.096 3.7 7.5 1.9 2 23 488 509 487 509 0.96

7 9 0.00034 0.013 15.2 1.5 2 23 515 537 514 537 0.96

8 9 1.2e-05 0.00045 19.8 0.4 1 23 543 565 543 565 0.97

9 9 9.5e-05 0.0037 17.0 4.9 1 23 572 595 572 595 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.41	16	5.5	0.4	2	23	307	332	306	332	0.88
2	9	2.9e-05	0.0011	18.6	1.2	1	23	364	386	364	386	0.99
3	9	0.0019	0.073	12.9	3.7	1	23	394	416	394	416	0.97
4	9	7e-05	0.0027	17.4	0.4	1	23	425	448	425	448	0.95
5	9	0.00022	0.0087	15.8	2.3	1	23	456	479	456	479	0.95
6	9	0.096	3.7	7.5	1.9	2	23	488	509	487	509	0.96
7	9	0.00034	0.013	15.2	1.5	2	23	515	537	514	537	0.96
8	9	1.2e-05	0.00045	19.8	0.4	1	23	543	565	543	565	0.97
9	9	9.5e-05	0.0037	17.0	4.9	1	23	572	595	572	595	0.98

Sequence Information

Coding Sequence: ATGGAAATATTAGAGTGTAGATTTGCCACTGAAGCATCATTTTGTCGATTGTGCTTTGTCCGGGAGGGATCATTCAGGAAGATAGACAACATCATCGATGGAGTTGCTTCCAACAAAATAATTGCATATTTGGTGGAAAAGCATCTACATGTTAAGATTTTTGAGGTTAGCTACTTGGTTTGCGAAGACTGTTCCTTGAGACTTCTTGCATTTGAAGAATATTACACAAAGGTTCATTTGCACATTGACAAATACTACTCAGAAATCCATCAAAATCTGCCGAATTACAAGCATGATCCTCCTTCTGAGATTATTCCACCCAATCTTCCTGACCTTCCTCCATCTAACAATCTTCCCATTTTTGGGGAGAATGTTGTGGAATCTTTCACTCCAAGTAAAACAGACTTAGAGGAATACATCCCACCATTATCCGAGACTAAAACAGAAATCAAGGAGCAAGTTGAAGAGGCTCCAAAGAGAATAACAAGATCTTCCAGGCTGAAAAAGATCAATTCAGAGCAAAGTACTTCTCAAGTTGCTATTCCAAAGAGGAGCACAAGGAAGTCTAAAAGAACTCCTAAAGTTAAAAAAGAATATCAAGAAGAGCCCTTAGTGTTAGATAAAATAAAATTAGAGGCAGAGGAAGACAATCAGGAAGCTCCTGAGCTTCCGGAAAAGCAATTGAGGGCTAAGAAAAAATCCCTAAAGAGAAGAAAGAGCATTTCATATGAATCACTAGGAGAATTTGACTTTAGAGATGACGATAGTGATTCAGATGAGAATTCTCAAGCTTCTGACTGGGAAGAGTGGCCAGGAGCTGTTAATCTCAGTGATTTTCCTGCGCAAATAATTGAGAATGGCCTGTTGAAAGTGAAGGGGAAGGAGCTGTTAGGATTGATTTGTAAATTCTACAATCTCGAGTGCAATGTCTGTGGGAGAGATAGCCCTAAATTCCCTGATTTGACAGACCTCTTCCAGCACTATTCGACGGTGCATCAGGAAAAGGGATATGTCATGTGCTGTTCGGCCAAATTCCATCGATACCCGGCAATTGTGATGCACATGGTGCGTCACATTCAGCCAGATGCATTTAAGTGCAATATTTGTGGCTACATGGTCACCCGGCCACGTTTCCTGGAGAGTCACAAAAAGACACATTTACCGGAGGAGCAGAAACCCTTCGCTTGTGATCACTGCCCCAGGCGCTTCTGCTGGAAGAGTGCTCTAAAAGTGCACAAACTCACGCATGAGCCCAAAGATGTCCGGAAGCACTTTATCTGTGACATCTGTGGCAAGATTTACGACACTCCCGGAGGCCTCTGTACCCATCGAAAACTCTCCCATACCAATTACAAGAGTGAACCCCATTTCTGTCATGTCTGTGCCAAGAAATTTGCCACAAGAACCGGTCTCAATGAGCACATGGCCACAATCCATCAGCCCAGGGAGAAGGATCAGGTTCAGTGCCAGAAATGTGGCAAATGGCTGATGAACAATCGCTGCCTCAAGTCCCACATGATTCTCCACAGCAGTACATTCCTCCGCTGCGAATCCTGTGACTACACCACCAAGAAAGAATCCCTCCTGCGCCGCCATCAACTAACTCAGCACTCAGATGCCAAACCCTTCAGTTGCACCATCTGCGGACGAGCCTTTAAGCTCAAGAGAGCCCTAACTGTGCACATTTCTCAGCACGAAAACACCAAAAAGCAATACAAATGCAATTTCTGCGATAGATTCTTCAACAGTTCCACCAACTTCTACACTCACCGCAAAACAGTTCATCCGGAAGAACTGAATGCCCTCAACAGAGCAAAGCTCGAGGAACAGCGACAGAAACGCATTGAGGCAGGCATTGAGCATCCCCATTCAATAACACAAATCCCAAATGCCCAAACAGAAGAGAAATTGATTATTGTTCCACAGCCACAAATGGCCAATCCAGTAGATTTCAGCAATATCAACCAACCAGTTCAAACTTATCAAATTATCAATGAACAAGGAACAATCACAACAGTAATTTCCGGAGATATTTGTGAATAG
Protein Sequence: MEILECRFATEASFCRLCFVREGSFRKIDNIIDGVASNKIIAYLVEKHLHVKIFEVSYLVCEDCSLRLLAFEEYYTKVHLHIDKYYSEIHQNLPNYKHDPPSEIIPPNLPDLPPSNNLPIFGENVVESFTPSKTDLEEYIPPLSETKTEIKEQVEEAPKRITRSSRLKKINSEQSTSQVAIPKRSTRKSKRTPKVKKEYQEEPLVLDKIKLEAEEDNQEAPELPEKQLRAKKKSLKRRKSISYESLGEFDFRDDDSDSDENSQASDWEEWPGAVNLSDFPAQIIENGLLKVKGKELLGLICKFYNLECNVCGRDSPKFPDLTDLFQHYSTVHQEKGYVMCCSAKFHRYPAIVMHMVRHIQPDAFKCNICGYMVTRPRFLESHKKTHLPEEQKPFACDHCPRRFCWKSALKVHKLTHEPKDVRKHFICDICGKIYDTPGGLCTHRKLSHTNYKSEPHFCHVCAKKFATRTGLNEHMATIHQPREKDQVQCQKCGKWLMNNRCLKSHMILHSSTFLRCESCDYTTKKESLLRRHQLTQHSDAKPFSCTICGRAFKLKRALTVHISQHENTKKQYKCNFCDRFFNSSTNFYTHRKTVHPEELNALNRAKLEEQRQKRIEAGIEHPHSITQIPNAQTEEKLIIVPQPQMANPVDFSNINQPVQTYQIINEQGTITTVISGDICE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -