Basic Information

Insect: Phlebotomus papatasi
Gene Symbol: -
Assembly: GCA_000262795.1
Location: Scaffold685:3652-10563[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 9.1e-05 0.0035 17.0 1.5 1 23 82 104 82 104 0.98

2 11 0.00036 0.014 15.2 2.9 1 23 111 134 111 134 0.95

3 11 2.2e-06 8.7e-05 22.1 2.2 2 23 140 161 139 161 0.97

4 11 0.031 1.2 9.1 0.2 1 23 165 188 165 188 0.80

5 11 0.083 3.2 7.7 0.4 2 19 206 222 205 223 0.94

6 11 1.3e-05 0.00049 19.7 0.9 2 23 271 293 270 293 0.96

7 11 3.1e-05 0.0012 18.5 1.5 1 23 313 336 313 336 0.96

8 11 3.2e-05 0.0013 18.4 1.3 1 23 342 365 342 365 0.96

9 11 1.1e-05 0.00043 19.9 0.1 2 23 371 392 370 392 0.96

10 11 0.013 0.51 10.2 1.6 2 23 401 422 400 422 0.96

11 11 0.00047 0.018 14.8 0.1 1 23 527 550 527 550 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	9.1e-05	0.0035	17.0	1.5	1	23	82	104	82	104	0.98
2	11	0.00036	0.014	15.2	2.9	1	23	111	134	111	134	0.95
3	11	2.2e-06	8.7e-05	22.1	2.2	2	23	140	161	139	161	0.97
4	11	0.031	1.2	9.1	0.2	1	23	165	188	165	188	0.80
5	11	0.083	3.2	7.7	0.4	2	19	206	222	205	223	0.94
6	11	1.3e-05	0.00049	19.7	0.9	2	23	271	293	270	293	0.96
7	11	3.1e-05	0.0012	18.5	1.5	1	23	313	336	313	336	0.96
8	11	3.2e-05	0.0013	18.4	1.3	1	23	342	365	342	365	0.96
9	11	1.1e-05	0.00043	19.9	0.1	2	23	371	392	370	392	0.96
10	11	0.013	0.51	10.2	1.6	2	23	401	422	400	422	0.96
11	11	0.00047	0.018	14.8	0.1	1	23	527	550	527	550	0.93

Sequence Information

Coding Sequence: ATGGACATTGAAAGTCAACAAGACAAGGAAGATGATTTCTTTGAGTACAGCATTGTAAAAGAAGAATGGACTATCCAGGAAGGGACCGAACAATTTCCAGATGACAATAAGAATTTATTAGAAGATATTAAGGAAACAGAGGAAGTGCCGTATCTGGTAACAGAACTTGGTGAGGAGACAAACTTAGTGGAATATCAGAGAGCACTTGTGGATGATCATTTTTCGAGAAGTATCACTGAAAAACACAAATGCAACATTTGTGGCAAGACATTCTTGATCTTCAGCGATCTTCAAGCCCATTTGCGTAATCATGATTCGTTACTGCGAACCTTTCAATGTCTTGAATGTCAAGAGACTTTCACTAGCAGACACAGCCTACATGATCATGTTCAAGAAATTCACTCCAAAGATATACTACCATGTCACATTTGTGGAAAATTTTTCAGAGGAAAGAAATTACTTAATAACCACATCAAGAGACATGACACTCAGTATACTTGTGGAATCTGCGGCAAAGCGTTCTGGAGTTCTATTTCAGTTCAGTTTCATATTAAACGAGAACATAGGGTGCATAATAAGGAAGATACTACAACGAGTAGTGATTTAACTGAGGTTAAATGTTTATACTGTGATAAGGATTTTCTTAAAAGTGACCTAAAATACCATGTTTGGGAGTTACACACAGGACTTCCAGTAAATATAAGTGACGGCCCTATTTCACCAAAATTTTGCTCAGTGGTATTGCCGCAAATGAATCTGGTGAATTTTATAAAGAAACGTATTCCTAAACCACCTTTAGGGAAAATCTGGCGCTGTCCAATTTGCAGGCATACATTTTCAGATCAAGAAACTTTAAAAACCCATGCTATGACAATTCATAGTCATATAATTATTTTTCCAAAATCTCTAAATACGAAAACGAAAAATCAAGGCACTTTTGCCTGCAAGATATGTAAAAGAATGTTTATCAAACAGAAATACCTTCAAACGCACGTGAGAAATATTCATGCAATTGAAAAGGATTACCAGTGTGCTCACTGTCCAAAGGCTTTCTCATTCAGGTATCAGATTGTGAGACATTTAAGGGATGTTCACTCATCTAGAGAACTACCATGTGATCGCTGTGACAAGGCCTTCAAATCACTTGAAGGACTAAACCGACATATTGCGAGGCACGAAAAGAAACCATTCCATTGCAATCAATGTAAAACTTGTAAGAGTACTTTCAGCCAAAGATGGAAGTACGAGTTACATTTACTTGAACATAAGAAATTATTAATGAAATCTGTGAAACCTGAGCCTCCGAAATCTTTTATCATTGTCGACATGAGAACACCACAAATTTTACCACAATTCACAGTACTTTCATCCCCAAACCTAAATGAGATCCCTAATAATACGATAAATTCCGAAACACGGACTTACTACGCatatccaacaatatccaacaacaatccaacaatTCCTGCAATTCCGAATACACTACCGAAGTTTGTTTCAGTACAGTGCGATAAACCTTCACAACCGTCTAAAGTAGCAACATTCGGCAAAAGTATACAAATAAAGCCAATTCAGGGCTTTAAATGCCCGATATGCGGAAAAGTATACGTTGAGAAACAGGAGATTGTTGACCATGTCATGTATCAGCACAGTGGAATCACAAGAAAATATAAAAGAAAGAAATCTACTAAGACTACCAAAACCACCAAAACTGATATTATTGAAATAGATTAA
Protein Sequence: MDIESQQDKEDDFFEYSIVKEEWTIQEGTEQFPDDNKNLLEDIKETEEVPYLVTELGEETNLVEYQRALVDDHFSRSITEKHKCNICGKTFLIFSDLQAHLRNHDSLLRTFQCLECQETFTSRHSLHDHVQEIHSKDILPCHICGKFFRGKKLLNNHIKRHDTQYTCGICGKAFWSSISVQFHIKREHRVHNKEDTTTSSDLTEVKCLYCDKDFLKSDLKYHVWELHTGLPVNISDGPISPKFCSVVLPQMNLVNFIKKRIPKPPLGKIWRCPICRHTFSDQETLKTHAMTIHSHIIIFPKSLNTKTKNQGTFACKICKRMFIKQKYLQTHVRNIHAIEKDYQCAHCPKAFSFRYQIVRHLRDVHSSRELPCDRCDKAFKSLEGLNRHIARHEKKPFHCNQCKTCKSTFSQRWKYELHLLEHKKLLMKSVKPEPPKSFIIVDMRTPQILPQFTVLSSPNLNEIPNNTINSETRTYYAYPTISNNNPTIPAIPNTLPKFVSVQCDKPSQPSKVATFGKSIQIKPIQGFKCPICGKVYVEKQEIVDHVMYQHSGITRKYKRKKSTKTTKTTKTDIIEID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -