Basic Information

Gene Symbol
ZNF219
Assembly
GCA_000262795.1
Location
Scaffold108:5639-17368[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.00037 0.015 15.1 0.2 1 23 68 90 68 90 0.98
2 11 9.5e-06 0.00037 20.1 1.7 1 23 96 119 96 119 0.96
3 11 4.6e-05 0.0018 18.0 0.3 1 23 125 147 125 147 0.98
4 11 7.4e-06 0.00029 20.5 0.5 1 23 153 175 153 175 0.99
5 11 0.16 6 6.9 3.7 1 23 181 203 181 203 0.97
6 11 1.7e-05 0.00066 19.3 0.8 1 20 209 228 209 229 0.96
7 11 0.017 0.67 9.9 2.0 1 23 238 258 238 258 0.93
8 11 1.9e-06 7.3e-05 22.3 0.1 3 23 266 286 265 286 0.99
9 11 1.5e-05 0.00059 19.5 1.1 1 23 292 314 292 314 0.99
10 11 0.0039 0.15 11.9 0.4 1 23 320 346 320 346 0.94
11 11 0.0025 0.098 12.5 0.6 1 19 352 370 352 372 0.96

Sequence Information

Coding Sequence
ATGAGAAAATCGCGAAGATTGTCTCAAAAAGTGGCAGCAGCAGAAAAAGCTGCTGCTGCTGCCAAGACAAAAAATACCAGTCAACATGATCGGGTACCAAAGATTGAACCAAAGGATGAGCCTGAAAAATCGTCAGAGCCTGATCCACAGCTTGAGCCAAAGATTGACAACAGTCCAAAGAAGAAGAAAAGCACGAAGAAGTACATTTGCGATGTCTGCGAAAAGATCTTCCAAGGTCTCAATGATCTACGAAAGCATTCAAGAATTCACAACGACGAAAGACCCTATGCTTGTTCTCAATGCGATAAGAAATTTCGTCAGGCGGGATGCCTGAAAAATCATATAGCTTCGCAGCATGGGAGTGATGTTCAGTACATCTGTGACTATTGTAACAAGCCCTTTCCGATCAAAGAACGCCTCAGGCTCCATCTTAGGATCCACACCGGTGAGAAGCCCTACAAATGCAAATTGTGTCCTAAGCAGTTTGCACGTGGAGGACAACTGTCTCAGCACATGCTCTCCCATAATGGCGTCAAAAAGCATCGATGCAGTTTCTGTCCCAGCGCCTTTTCATGTTCTGCTAATCTGAGGCTGCACACAAAAGCTCACAATGATGAGCGTGATTACACGTGTCACAAATGTGGCAAGAGTTTTCTGCGTCCTGATGCCCTGAACAAGCATTTATCGTGCCTCCATGGCAACGTTAAGGCTTTTCTCTGTCCGATTTGTAAGAAGATGTTCAAAGGTCATTTGCCGCAGCATATGCGCATCCACAAGAACTTGAAGCCACATGGCTGTGCAGATTGTGGCACGGCCTTCACGCAGCGTAGTCAGTTGGTAGTGCATCAGAGGATTCACTCTGGTGAAAGGCCATATCGTTGTCAGGTTTGCTGGCAAGCTTTTGCTCACTCCAGTGTCCTCAAGCTGCATATCCGGAAGCATACGGGTGAGAAGCCTTTCAAGTGTCCACTCTGTGTGGAACAAGAAACAGCTTTCTCACAGCTTCCACATCTCAAGAAGCATATGCAGGCCATACATAAACAGGATAAGCCTTACATGTGCGAGTCTTGCAATCAATTTTTCCGCACCAAGATCGAGCTTACGCAGCATAATAGTGAATGCACGAAGCAAGAGGATGCAGAAGTCAATGGAGGAGGAGAGAGCGATACTGAGGGAATGATTGAGACTCCAATGGCTCTAAGTCGAATGCGTCTACTGGTGGCAGTGCTCATAAAGAAGATCTCATCAGATGAACGTCTCAAGACTTTGGGTTTTGAGAAGAGATTGATTGACAATGTGCTGATTGATTCACTGAAATTTGGCAAGAGGACAGTCTGTGAAGATGCCACGAAGTCTGAAGCTGAGAGGCTGAAGATAAATATTCGTGAGCTTCTTGAGTGGACAGTTCCACAGCATTTCATGGAGAAGTTCAAGAGTGAACAGAAGAGCACAGAAGAATTGCTCGAGGAATTAGCCAGTTAA
Protein Sequence
MRKSRRLSQKVAAAEKAAAAAKTKNTSQHDRVPKIEPKDEPEKSSEPDPQLEPKIDNSPKKKKSTKKYICDVCEKIFQGLNDLRKHSRIHNDERPYACSQCDKKFRQAGCLKNHIASQHGSDVQYICDYCNKPFPIKERLRLHLRIHTGEKPYKCKLCPKQFARGGQLSQHMLSHNGVKKHRCSFCPSAFSCSANLRLHTKAHNDERDYTCHKCGKSFLRPDALNKHLSCLHGNVKAFLCPICKKMFKGHLPQHMRIHKNLKPHGCADCGTAFTQRSQLVVHQRIHSGERPYRCQVCWQAFAHSSVLKLHIRKHTGEKPFKCPLCVEQETAFSQLPHLKKHMQAIHKQDKPYMCESCNQFFRTKIELTQHNSECTKQEDAEVNGGGESDTEGMIETPMALSRMRLLVAVLIKKISSDERLKTLGFEKRLIDNVLIDSLKFGKRTVCEDATKSEAERLKINIRELLEWTVPQHFMEKFKSEQKSTEELLEELAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01191410;
90% Identity
-
80% Identity
-