Ppap001384.1


Basic Information
Transcription Factor Domain
Sequence Information
Similar Transcription Factors

Basic Information

Insect
Phlebotomus papatasi
Gene Symbol
-
Assembly
GCA_000262795.1
Location
Scaffold686:37292-55415[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 24 0.031 1.2 9.1 0.0 1 23 204 226 204 226 0.97
2 24 0.028 1.1 9.2 0.9 2 23 234 256 233 256 0.93
3 24 0.00014 0.0055 16.4 0.7 1 23 262 284 262 284 0.96
4 24 1.9e-05 0.00072 19.2 2.5 1 23 290 312 290 312 0.99
5 24 0.00018 0.0071 16.1 4.8 2 23 319 340 318 340 0.96
6 24 0.0024 0.094 12.6 1.4 1 23 346 368 346 368 0.98
7 24 1.7e-05 0.00065 19.3 1.0 2 23 375 396 374 396 0.97
8 24 1.7 65 3.6 0.4 1 10 402 411 402 415 0.89
9 24 0.031 1.2 9.1 0.0 1 23 436 458 436 458 0.97
10 24 0.028 1.1 9.2 0.9 2 23 466 488 465 488 0.93
11 24 0.00014 0.0055 16.4 0.7 1 23 494 516 494 516 0.96
12 24 1.9e-05 0.00072 19.2 2.5 1 23 522 544 522 544 0.99
13 24 0.00018 0.0071 16.1 4.8 2 23 551 572 550 572 0.96
14 24 0.0024 0.094 12.6 1.4 1 23 578 600 578 600 0.98
15 24 1.7e-05 0.00065 19.3 1.0 2 23 607 628 606 628 0.97
16 24 1.7 65 3.6 0.4 1 10 634 643 634 647 0.89
17 24 3.6e-05 0.0014 18.3 0.1 3 23 792 812 790 812 0.94
18 24 0.0006 0.023 14.5 1.1 1 23 818 841 818 841 0.96
19 24 0.00036 0.014 15.2 0.3 1 23 847 869 847 869 0.97
20 24 0.0018 0.069 13.0 3.1 1 23 875 897 875 897 0.96
21 24 1.9e-05 0.00073 19.2 0.4 1 23 902 924 902 924 0.98
22 24 0.00051 0.02 14.7 0.7 1 23 930 952 930 952 0.99
23 24 1.7e-05 0.00065 19.3 1.0 2 23 959 980 958 980 0.97
24 24 0.025 0.99 9.3 0.4 1 23 986 1008 986 1008 0.97

Sequence Information

Coding Sequence
ATGATCAACACCAATCCTCTCAGCTTCCTCCGTTGCAAGGGTGTACTTCAGAGGAACAAACAGCATTGTTGCTTCTCCCTGAACAATATCAATGATGGACTCATACAGTCCAATTGGGAGTTTCTGAAAACCCAAAGATCATCATTTTCTACTACCTACCAAAAGCAGAATCTCATTTCAGCTAACGATAGATTTCCTACAACTGTATGTCCTCTCTGTGTGTGGAATATAAATTTAGCATTCAAATTTGTGACTGATTGCAAGAGATCTCAGAAATGGTTCAAGGAGAGTTTGTCCGAAAAGGAGGAGGATATTGGGGATATGGATTCTTTTCCGAGGGCTGCAAATATTCCTGAGATAACTATGGATTCTCAGGAGATTATTCAGTCTTCCAAGGAGGAGACATTGCCAGGAAATTCAAAGGAGAACAAGATTGAATTCGGAAATTCAGAAAAAGTGAATGAATTTTCAGAAGATGGAATCCCTTCCCCAATGTCAATTCACAGTTTTGGATCAGACAATGCTGAAGCTCCAGATATTCCTTTAGAGGTGGCTCCTGTGGCAAAAAAGAAGGGACCAAAAAGGAGGAAGCGGGTTCCAAACGGAGAATATGTTTGCGAGCCATGTGGAAAGGTTTTCGGTTGGAAATTTATGCTTAGGGATCACATTTTAGTACACTTCAATAAGGCAAAGCCATTAAAGTGCAAATACTGCCCAAAGAAATATATTAAGAAAAATATTCTGGCAAATCACGTAAAGCTCAGTCATGAAGGGGAAAAGAGGCATATCTGTGAGATTTGTGGCAAAGATTTTAGGGCATTCGTTAATTTGAAAAACCACTATCTGGTGCACACGGGTGAAAAACCATTTCAATGTTCCATTTGTTCACGCAGATTTTCCAGAATAAGCAATATGCGAACTCATGAGAAAACTCACACTGTTAGACAAAGGTGCATTTGTCACATTTGTGGCAAGAGCTATGCTTCCAAAAATTGTCTCCAAGAACATCAATTGATCCACAAAGGGATCAGGAAACACGAATGCGATGTGTGCAAAAAGAGATTCCTCACAAAAGCCGGCCTCATTGATCACAGTCGTACTCATACGGGAGAACAGCCCTGGAACTGTCCGTATTGCAGTCGAACTTTTGCTCAACGGAATTCCATGAGATCCCATATCAAAACCCATCCGGAAGCTACGACTTTCCCCTGCACAATATGCAATAAAAAGTACCTGCGACAAGATGTGGCTCCTGCGGTAAAAAAGAAGGGACCAAAAAGGAGGAAGCGGGTTCCAAACGGAGAATATGTTTGCGAGCCATGTGGAAAGGTTTTCGGTTGGAAATTTATGCTTAGGGATCACATTTTAGTACATTTCAATAAGGCAAAGCCACTGAAGTGCAAATACTGCCCAAAGAAATATATTaaaaaaaaTATTCTGGCAAATCACGTAAAGCTCAGTCATGAAGGGGAAAAGAGGCATATCTGTGAGATTTGTGGCAAAGATTTTAGGGCATTCGTTAATTTGAAAAACCACTATTTGGTGCACACGGGTGAAAAACCTTTTCAATGTTCCATTTGTTCACGCCGATTTTCCAGAATAAGCAATATGAGAACTCATGAGAAAACTCACACTGTTAGACAAAGGTGCATTTGTCACATTTGTGGCAAGAGCTATGCTTCCAAAAATTGTCTCCAAGAACATCAATTGATCCACAAAGGGATCAGGAAGCATGAATGCGATGTGTGCAAAAAGAGATTCCTCACAAAAGCCGGCCTCATTGATCACAGTCGTACTCATACGGGAGAACAGCCCTGGAACTGTCCGTACTGCAGTCGAACTTTTGCCCAACGAAATTCAATGAGATCCCACATCAAAACCCATCCGGAAGCTACGACTTTCCCCTGCACAATCTGCAATAAAAAGTACCTGCGACAAGATTTTGTGTCTGAATGCAAAATATCTCAGGAATGGTTCAAGAAGACTTTGGAAGAGAATGACACAAAGGACTTTGTATCTCTGGCCTGTGTGAGTTCTATGCCAAGTGGCTCAGTTCTGGAGAGCTGTAAGAATGAGGAATCGAAGGAGGATGTAAGTGAGATATTGAGTCAAGTGACTGTCAAGATAGAAACGATAGATTCCTGTCCGGATGCTGCATCATCTCCACATTCAGTTAATAGCGTGAAATTTGAGGATGACCAGGATGTAGGGAATCCTCTTGAAACTACTCCTGAAATTATTGAAGAAAATCCAAAAAGTCCCCGGAGAAAACGGGCAAAGAAAGGGGAAGGAAAGCATGCAAAAGAGGGTGGCAAAATTGTCCGGAAAAGGAGGAGAAAGCCCAGAGATGTGAAACCACGTATTGGCCTGATCTGTGAGGCTTGTGGGAAGGTTTTCAAGAATAAAGGCTCCCTTCAGACTCACGTTTATGTCCATACAAAGAGTAAACCGTTCAAATGTAGCGCCTGTGATCGGCAATTTTGTGTGGAGACTAATCTCCGGGAGCATATGGATATAGTTCATATGGGTATCAAGAAATACATTTGTGAAGCCTGTGGACGCAATTTTATGTCTGCCCAGAACTTGAAGAGTCACCGAATGCTTCATTCAGGCGAGAAGCCCTATCAATGCAGCATATGCCCGAGGCGTTTTGTTAGTCGCAGCAATTGCAAGACACACGAACTCAATCATGCAAAAATCCGCTTCCGATGTGATATCTGTGACAAGACCTATGCATCGAAAAATGTCCTAACAGCTCATCGACAGATTCACAGTGGCATCAGGAGATTCCAGTGCGATGTTTGTGAGAAGAAATTCCTCACAAAAGCCGGCCTCAATGATCACAGTCGTACTCATACGGGAGAACAGCCCTGGAACTGTCCGTATTGCAGTCGAACTTTTGCCCAACGAAATTCCATGAGATCCCACATTAAAACCCATCCGGAAGCACAAACATTTCCATGTACCATCTGCAAGAAGAAGTATTTGCGAGAGGATATCCTCGAAGCACATCTCAAGACTCATGAAGAAATGAAGTAG
Protein Sequence
MINTNPLSFLRCKGVLQRNKQHCCFSLNNINDGLIQSNWEFLKTQRSSFSTTYQKQNLISANDRFPTTVCPLCVWNINLAFKFVTDCKRSQKWFKESLSEKEEDIGDMDSFPRAANIPEITMDSQEIIQSSKEETLPGNSKENKIEFGNSEKVNEFSEDGIPSPMSIHSFGSDNAEAPDIPLEVAPVAKKKGPKRRKRVPNGEYVCEPCGKVFGWKFMLRDHILVHFNKAKPLKCKYCPKKYIKKNILANHVKLSHEGEKRHICEICGKDFRAFVNLKNHYLVHTGEKPFQCSICSRRFSRISNMRTHEKTHTVRQRCICHICGKSYASKNCLQEHQLIHKGIRKHECDVCKKRFLTKAGLIDHSRTHTGEQPWNCPYCSRTFAQRNSMRSHIKTHPEATTFPCTICNKKYLRQDVAPAVKKKGPKRRKRVPNGEYVCEPCGKVFGWKFMLRDHILVHFNKAKPLKCKYCPKKYIKKNILANHVKLSHEGEKRHICEICGKDFRAFVNLKNHYLVHTGEKPFQCSICSRRFSRISNMRTHEKTHTVRQRCICHICGKSYASKNCLQEHQLIHKGIRKHECDVCKKRFLTKAGLIDHSRTHTGEQPWNCPYCSRTFAQRNSMRSHIKTHPEATTFPCTICNKKYLRQDFVSECKISQEWFKKTLEENDTKDFVSLACVSSMPSGSVLESCKNEESKEDVSEILSQVTVKIETIDSCPDAASSPHSVNSVKFEDDQDVGNPLETTPEIIEENPKSPRRKRAKKGEGKHAKEGGKIVRKRRRKPRDVKPRIGLICEACGKVFKNKGSLQTHVYVHTKSKPFKCSACDRQFCVETNLREHMDIVHMGIKKYICEACGRNFMSAQNLKSHRMLHSGEKPYQCSICPRRFVSRSNCKTHELNHAKIRFRCDICDKTYASKNVLTAHRQIHSGIRRFQCDVCEKKFLTKAGLNDHSRTHTGEQPWNCPYCSRTFAQRNSMRSHIKTHPEAQTFPCTICKKKYLREDILEAHLKTHEEMK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-