Ppap008261.1
Basic Information
- Insect
- Phlebotomus papatasi
- Gene Symbol
- -
- Assembly
- GCA_000262795.1
- Location
- Scaffold624:32133-34214[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.016 18 4.8 4.4 14 41 138 162 128 164 0.88 2 10 0.093 1e+02 2.4 0.6 17 29 169 181 163 185 0.84 3 10 0.00076 0.83 9.0 0.4 17 29 188 200 182 211 0.81 4 10 0.0092 10 5.6 0.7 14 39 213 240 205 243 0.77 5 10 3.8e-05 0.041 13.2 0.9 15 41 249 272 244 274 0.89 6 10 0.076 83 2.6 1.2 17 29 279 291 272 297 0.80 7 10 0.0014 1.5 8.2 1.4 11 40 304 330 290 333 0.74 8 10 0.53 5.8e+02 -0.1 0.3 15 29 336 350 333 362 0.68 9 10 0.076 83 2.6 2.2 12 27 368 383 360 396 0.75 10 10 3e-05 0.033 13.5 3.0 6 44 391 425 386 425 0.88
Sequence Information
- Coding Sequence
- ATGGCTTTGGCACTGGATCCTTTGATTCCGTGTTATGTTCTGGAAGATGCTTTTGAGCAAATTACATCAATCCATGATTCCCTCTCCAAGCACAGTAATTCCTTGCCAAAATGTGAAATCTGCTGGGATTACGATAATGAGATTTCATCAATCAAAGCTCAATTGATTGTAATTTTAGGTAGTTTTCCTAGGAGAATTGTGAAGATAGAGGATATTCCGGATATTTCCTCAGAACAAATCCTAGACAGTCATTCAAATGATGCAAGTAATCACAATACTGAGGATGAAACTGAAGAAGTCATTGAAAAGGATGATTTAGCAGCTCTTCCGGAGACGGTGGCAATAGAATTTTCTTCTAAGGAGAAAATACGAAGAAAATCTCCAAGAAAACTCAACTTTGAGGGGAAATCGAAGAAGAACTACAAATGCGAAACATGTGGAAGGATTCTGTCGTGCCATCAGCGACTTATGGATCACATTCGTAGTCATTCTGGTGAGAAACCCTTTGAATGTGCAACGTGTGGGAAGAGTTACTCCACCAAGGAATACCTCTCCGATGCTTTCAAATGTGAATTCTGTGGGAAGAATCTGTCGGGAAAGGAACGTTTGGCGGAACATAAGAGGATGCATACGGGAGATAAACCAGCTCAGTGTGATATATGCGGAAAAAGATTCCATGGTGAAATGTCTCTCTACAGTCACCGGAGACTGCAACACCTTAAACCGGGTCTAGGTACGGCAAAAACGGAATACAAATGCGAAATTTGCGGGAAAACTCGAGCCAGAAAGACCGGCCTCATCGAGCATATGCGTACTCACACCGGTGAGAAACCATTCAAATGTGATATCTGCGGAAAGAGTTTTACATTGAAAAATCATTGCATAAAACATCGGGAGATTCATGAGAGGAGTGAAAAGGGTGATATGTACAAATGCGAATTCTGTGGCAGAAGTATGTCTGGGCAGGAAAGGCTGACGGAACACATGAGGATGCATACGGGTGAAAAACCCGCTCAATGTGATGTTTGTGGGCGTTTTTTCCACGGACGCATGGCACTGTATAGTCATCGGCGTACGCAGCATTCATCTGGGGTAAATCCCTATCAGAGAAAGCGGTACAAATGCGATATCTGTGGCAAATTGATTCTGGATAGGAATAGACTTACAGAACACGTTAGAATTCACACGGGAGAAAAACCCTTCAAATGCAACATGTGCGAGAAGAATTTTGCAAGAAAATCCAAATTGCTGCTGCATGTAAAACGAGCCCACAAGACTACGTTCCCGcaaaatcaataa
- Protein Sequence
- MALALDPLIPCYVLEDAFEQITSIHDSLSKHSNSLPKCEICWDYDNEISSIKAQLIVILGSFPRRIVKIEDIPDISSEQILDSHSNDASNHNTEDETEEVIEKDDLAALPETVAIEFSSKEKIRRKSPRKLNFEGKSKKNYKCETCGRILSCHQRLMDHIRSHSGEKPFECATCGKSYSTKEYLSDAFKCEFCGKNLSGKERLAEHKRMHTGDKPAQCDICGKRFHGEMSLYSHRRLQHLKPGLGTAKTEYKCEICGKTRARKTGLIEHMRTHTGEKPFKCDICGKSFTLKNHCIKHREIHERSEKGDMYKCEFCGRSMSGQERLTEHMRMHTGEKPAQCDVCGRFFHGRMALYSHRRTQHSSGVNPYQRKRYKCDICGKLILDRNRLTEHVRIHTGEKPFKCNMCEKNFARKSKLLLHVKRAHKTTFPQNQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01192093;
- 90% Identity
- iTF_01192093;
- 80% Identity
- iTF_01192093;