Basic Information

Gene Symbol
mier1_1
Assembly
GCA_000262795.1
Location
Scaffold25:75788-78029[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.1 6.5e+03 -3.3 1.0 5 15 87 97 87 97 0.78
2 2 9.5e-09 8.7e-06 25.1 0.2 2 46 311 356 310 356 0.93

Sequence Information

Coding Sequence
ATGGACTCAAGTGCAAGTGCAATGGAGCACGACAAAACAGCCACAGCGGAAGAACCACCGGAAACCCGGGCATCTGAGGCTCCGCCCCAGATCAGAGCCCCATCGAGGAGGCGTAGACCATCAGCAGCTGCGGCTGCTGGTGGTAAAGTTCGACGCACGGCTTCCAGGCAGCGTGGAGAGGCTCCGGAAGAGATCCTTCCGGATGCAACTTTTGAGCTGGATGTGGACATGATGGTGCATGATTTTGACGATGAACGCACTCTCGAGGAGGAAGAAGAACTAGCTAAGGCAGAATCTGAGGATCCCAATACAGAACTGTCCACGCTGCAGATGGAATCGGAGATGCCTCTGGACGAGGTGCTGAAGATGTACAATTGTCAGTTTTCGCGATCGGGATCAGAGGCAGAGAGTGATGTTGCGTCTGAGGAGGAAGATGAGGAGGATGAACCCGAGGAGTCGGCTCTGCGGAAGTTGTATCCTGAGATGCCGGATTCAAGTGTTGGCGGTGGCACAAGAAAAGACTGTGATGAGGATGAGGAATCCGTGGGAGATGACGATGCGGCTCAGAAGGACTTTCTCCTGGGACACTGTCAAATTGTCATGGTGGGAGCTAAGTGGCAGGCCACAATTCCCGAAGGACTTACACCCTATGACACTGAGAATCCACCTGGTGAGGATAAACTCCTCTGGGATCCCAGTCCAGTGTCTCCGGATGAGGTTGAGGGATTCCTACGGAGGGCAGCAGATGCCGAAGCCAGTCAGCGACAGAGTCATGCAGCTGGAGATGAAAATGGCATGGACTTGGCGGCACTTCCGCGTGGAATTCATTTGCGTGACAGCGAAGGGGCACTGTATTCCCTCCTGAGGGCCAAGTACAATCCAGAGAGTGCCCTTGAGGATCTCCTGGCCACAACAGCACCAACACCCAGTCGCCCATGGAGCGAGGAGGAGTGCAGGTTGTTCGAAGAAGGTATCCGGATGCATGGGAAGCAATTCCGTAGTATCCATGAGGATTTCCTGCCGCACAGGCGAGTGGCTGAGTTGATTGAATTCTACTACCTGTGGAAGAAAACCGAGCGACATGATGTCTTTGCCAATGTGGACAGATTGCAGAAGAAGAAGTACAAGCTAAATCCAGGAGTGCCGGACTTCAGGGAAGAGTCTCCGGGCGCAACGTCACTCATTCAGTTTGACTCAAAACGCCTTCAGCCAAGGCGGCAGGCCACTCTGGGCACCAGGGATGAACTGGAGACCACCGAGATGAAGAGGGACGAGCACATGGAGGAGTATCAGGTGGAAAACAACTAG
Protein Sequence
MDSSASAMEHDKTATAEEPPETRASEAPPQIRAPSRRRRPSAAAAAGGKVRRTASRQRGEAPEEILPDATFELDVDMMVHDFDDERTLEEEEELAKAESEDPNTELSTLQMESEMPLDEVLKMYNCQFSRSGSEAESDVASEEEDEEDEPEESALRKLYPEMPDSSVGGGTRKDCDEDEESVGDDDAAQKDFLLGHCQIVMVGAKWQATIPEGLTPYDTENPPGEDKLLWDPSPVSPDEVEGFLRRAADAEASQRQSHAAGDENGMDLAALPRGIHLRDSEGALYSLLRAKYNPESALEDLLATTAPTPSRPWSEEECRLFEEGIRMHGKQFRSIHEDFLPHRRVAELIEFYYLWKKTERHDVFANVDRLQKKKYKLNPGVPDFREESPGATSLIQFDSKRLQPRRQATLGTRDELETTEMKRDEHMEEYQVENN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-